データ・AIのスキル

Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count assembly and a PyDESeq2 handoff. Use for FASTQ-to-counts analysis, nf-core/rnaseq configuration, STAR/Salmon quantification, or building a counts matrix for DESeq2. For single-cell data use scanpy; for statistical fitting alone use pydeseq2.

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Estimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps, mfapy isotope simulation, constrained multistart fitting, and flux-profile diagnostics. Use for 13C-MFA, carbon tracing, mass isotopomer distributions (MDVs/MIDs), positional isotopomers, parallel tracer experiments, and determining whether labeling data constrain a pathway flux. Distinguishes measured-label inference from COBRA flux balance analysis and flags experiments requiring nonstationary MFA.

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Applies Arbor Hypothesis Tree Refinement to research artifacts with repeatable evaluators, including model training, agent harnesses, data synthesis and benchmark optimization. Uses persistent hypotheses, isolated experiments, evidence propagation and held-out candidate comparison for multi-experiment research runs. Includes a standard-library state manager and guidance for the RUC-NLPIR Arbor CLI.

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Handles annotated matrices in single-cell analysis, .h5ad and Zarr files, and integration with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.

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Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise modeling, and low-level circuit design. For IBM hardware use qiskit; for quantum ML with autodiff use pennylane; for physics simulations use qutip.

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Draft or audit manuscript Data/Code Availability statements, dataset access routes, repository plans, and FAIR metadata. Use for 数据可用性声明、数据共享、数据仓库选择 and dataset citations; not general data cleaning or statistical analysis.

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Audit or improve manuscript statistical reporting, including experimental units, replication, uncertainty, tests, and figure statistics. Use for 统计审查、统计方法小节、图注统计 and reviewer concerns; compute new analyses only when requested with data.

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Use when working on, reviewing, or extending GitNexus's CFG/taint/PDG subsystem (the `--pdg` layers), or when reasoning about source→sink data-flow findings. Examples: "How does taint analysis work here?", "Why didn't explain find this flow?", "Add a new sink/source", "Review the interprocedural taint code".

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Use when querying or extending GitNexus's PDG control/data-dependence surface (the `pdg_query` MCP tool, CDG/REACHING_DEF edges), or reasoning about "what controls X" / "where does Y flow" / guard clauses. Examples: "what guards this statement?", "trace this variable within the function", "why is the pdg_query result empty?", "add a CDG query".

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Use when working in a project that depends on @prisma/orm-postgres, @prisma/orm-sqlite, or @prisma/orm-mongo (Prisma 8, formerly Prisma Next): editing contract.prisma or a contract.ts builder, running `prisma contract emit`, planning or applying migrations, editing migration.ts, writing db.orm / db.sql / db.query queries, wiring db.ts or middleware, integrating a build tool, using the Supabase extension or RLS, or reading a dotted error code such as MIGRATION.HASH_MISMATCH. Use when the user asks "what is Prisma 8", "where do I start", or compares it to another ORM. Use when the user asks to upgrade or bump Prisma 8 in an app or an extension package. Use when you see @internal/* or @prisma/orm-* imports, prisma.config.ts with definePrismaConfig, or contract.json / contract.d.ts. Do not use for Prisma ORM 7 or earlier (schema.prisma + @prisma/client).

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Astropy is the core Python package for astronomy, providing essential functionality for astronomical research and data analysis.

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Daily attendance register: check-in and check-out, hours worked, work mode, late minutes, leave and regularisation flags, as CSV, SQL, JSON Schema or Notion on request. Use for payroll input.

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Generate output schemas (dataset_schema.json, output_schema.json, key_value_store_schema.json) for an Apify Actor by analyzing its source code. Use when creating or updating Actor output schemas.

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Extract product data, prices, reviews, and seller information from any e-commerce platform using Apify's E-commerce Scraping Tool.

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Spectral vector search using graph Laplacian eigenstructure. Use when cosine/L2 similarity misses latent structure in your embeddings.

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Track engagement metrics, measure campaign ROI, and analyze content performance across Instagram, Facebook, YouTube, and TikTok.

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AI-driven data extraction from 55+ Actors across all major platforms. This skill automatically selects the best Actor for your task.

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When the user wants to set up, improve, or audit analytics tracking and measurement.

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Alumni and re-hire register: former role, last working day, re-hire eligibility, current employer and re-engagement date, as CSV, SQL, JSON Schema or Notion on request. Use for alumni outreach.

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Design, audit, and improve analytics tracking systems that produce reliable, decision-ready data.

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Build natural-language crypto/DeFi agents and EVM MCP plugins (Claude Code, Cursor, Codex, Gemini). Aomi turns prompts into wallet-signed txs on Ethereum, Base, Arbitrum, Optimism, Polygon, Linea — non-custodial, fork-simulated. 40+ apps: Uniswap, Aave, Lido, Morpho, GMX, Hyperliquid, Polymarket.

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Behavioral guidelines to reduce common LLM coding mistakes. Use when writing, reviewing, or refactoring code to avoid overcomplication, make surgical changes, surface assumptions, and define verifiable success criteria.

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Announcement board: author, category, department, priority, audience, publish and expiry dates, status and acknowledgements, as CSV, SQL, JSON Schema or Notion on request. Use for internal notices.

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Access 20+ years of global financial data: equities, options, forex, crypto, commodities, economic indicators, and 50+ technical indicators.

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