Data & AI skills

Use near the end of EZ_math_model intake when external/user-corpus contains user-provided papers, notes, PDFs, datasets, or examples that should become a local AGENTS.md reference index.

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Step 4 of the PaperOrchestra pipeline (arXiv:2604.05018). ONE single multimodal LLM call that drafts the remaining paper sections (Abstract, Methodology, Experiments, Conclusion), extracts numeric values from experimental_log.md into LaTeX booktabs tables, splices the generated figures from Step 2, and merges everything into the template that already contains Intro + Related Work from Step 3. TRIGGER when the orchestrator delegates Step 4 or when the user asks to "write the methodology and experiments sections" or "fill in the rest of the paper".

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Plan a multi-stop tour route with waypoint optimization, drive/walk time estimation, and POI discovery along the route using OSM data. Covers geocoding, nearest-neighbor and TSP-based ordering, time/distance matrix calculation, and itinerary generation with points of interest. Use when planning a road trip or walking tour with multiple destinations, optimizing visit order to minimize travel time, discovering sites along a route, or comparing driving versus walking versus public transport options.

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Run the viz pipeline to render icons from existing glyphs. Entry point for the viz subproject covering palette generation, data building, manifest creation, and icon rendering for skills, agents, and teams. Always use build.sh as the pipeline entry point — never call Rscript directly.

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Review a data analysis for quality, correctness, and reproducibility. Covers data quality assessment, assumption checking, model validation, data leakage detection, and reproducibility verification. Use when reviewing a colleague's analysis before publication, validating an ML pipeline before production deployment, auditing a report for regulatory or business decision-making, or performing a second-analyst review in a regulated environment.

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AI intuitive exploration for approaching unknown codebases, problems, or systems without preconceptions. Adapts the Coordinate Remote Viewing protocol to AI investigation: cooldown (clear assumptions), staged data gathering (raw signals → dimensional → analytical), AOL management (separating observations from premature labels), and structured review. Use when investigating an unfamiliar codebase with unknown architecture, debugging a problem where premature hypotheses could mislead, exploring a domain with limited context, or when previous attempts have been led astray by assumptions and "beginner's mind" would be more productive.

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Register trained models in MLflow Model Registry with version control, implement stage transitions (Staging, Production, Archived) with approval workflows, and manage model lineage with comprehensive metadata and deployment tracking. Use when promoting a trained model from experimentation to production, managing multiple model versions across development stages, implementing approval workflows for governance, rolling back to previous versions, or auditing model changes for compliance.

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Design monochrome ornamental patterns grounded in Alexander Speltz's classical ornament taxonomy. Covers historical period selection, motif structural analysis, prompt construction for line art and silhouette rendering, and AI-assisted image generation via Z-Image. Use when creating decorative borders, medallions, or friezes in a single color, exploring historical ornament styles through generative AI, producing line art or pen-and-ink renderings of classical motifs, or generating reference imagery for design or educational materials.

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Orchestrate end-to-end machine learning pipelines using Prefect or Airflow with DAG construction, task dependencies, retry logic, scheduling, monitoring, and integration with MLflow, DVC, and feature stores for production ML workflows. Use when automating multi-step ML workflows from data ingestion to deployment, scheduling periodic model retraining, coordinating distributed training tasks, or managing retry logic and failure recovery across pipeline stages.

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Design and operate a data integrity monitoring programme based on ALCOA+ principles. Covers detective controls, audit trail review schedules, anomaly detection patterns (off-hours activity, sequential modifications, bulk changes), metrics dashboards, investigation triggers, and escalation matrix definition. Use when establishing a data integrity monitoring programme for GxP systems, preparing for inspections where data integrity is a focus area, after a data integrity incident requiring enhanced monitoring, or when implementing MHRA, WHO, or PIC/S guidance.

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Conduct structured insect behavior observations using sampling protocols, ethogram categories, event recording, interaction logging, environmental context, and summary analysis. Covers focal animal sampling, scan sampling, all-occurrences sampling, and instantaneous sampling methods. Defines a standard insect ethogram with locomotion, feeding, grooming, mating, defense, communication, and rest categories. Includes timestamped event recording, intraspecific and interspecific interaction logging, environmental covariate documentation, and time budget analysis. Use when studying insect behavior for ecological research, documenting behavioral repertoires for a species, observing pollinator activity or predator-prey dynamics, or supporting conservation assessments with behavioral data.

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Organize, track, and value a trading card game collection. Covers inventory methods, storage best practices, grade-based valuation, want-list management, and collection analytics for Pokemon, MTG, Flesh and Blood, and Kayou cards. Use when starting a new collection and setting up inventory tracking, cataloging an existing collection that has grown beyond casual knowledge, valuing a collection for insurance or sale, or deciding which cards to submit for professional grading based on value potential.

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Set up systematic data labeling workflows using Label Studio or similar tools. Implement quality controls, measure inter-annotator agreement, manage labeler teams, and integrate labeled data into ML training pipelines. Use when starting a supervised ML project that requires labeled training data, when model performance is limited by insufficient labeled examples, when labeling text, images, audio, or video, or when implementing active learning to prioritize the most valuable examples.

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Systematically interpret Raman spectra to identify molecular vibrations, assess polarizability-driven selection rules, compare with complementary IR data, and evaluate depolarization ratios for symmetry assignment. Covers Raman-active mode identification, fluorescence interference mitigation, and reference spectrum matching.

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Systematically interpret nuclear magnetic resonance spectra (1H, 13C, DEPT, and 2D experiments) to elucidate molecular structure. Covers chemical shift assignment, coupling pattern analysis, integration, and correlation of multi-dimensional data into coherent structural proposals.

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Implement pharmaceutical serialisation and track-and-trace systems compliant with EU FMD, US DSCSA, and other global regulations. Covers unique identifier generation, aggregation hierarchy, EPCIS data exchange, and verification endpoint integration. Use when implementing serialisation for a new product launch, integrating with the EMVS/NMVS, designing DSCSA-compliant transaction exchange, building an EPCIS event repository, or extending serialisation to additional markets (China, Brazil, Russia).

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Extract data from web pages using the scrapling Python library — select the appropriate fetcher tier (HTTP, stealth Chromium, or full browser automation) based on target site defenses, configure headless browsing, and extract structured data with CSS selectors. Use when WebFetch is insufficient for JS-rendered pages, anti-bot-protected sites, or structured multi-element extraction requiring DOM traversal.

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Generate a Quarto-based tour report with embedded maps, daily itineraries, logistics tables, and accommodation/transport details. Produces a self-contained HTML or PDF document suitable for offline use during travel. Use when compiling a planned tour into a shareable document, creating an offline-accessible travel guide, documenting a completed trip with photos and statistics, or producing a professional tour proposal for a group or client.

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Generate a project status report by reading existing artifacts (charter, backlog, sprint plan, WBS), calculating metrics, identifying blockers, and summarizing progress with RAG indicators for schedule, scope, budget, and quality. Use at the end of a sprint or reporting period, when stakeholders request a health update, before steering committee or governance meetings, or when a new blocker or risk materializes mid-project.

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Generate publication-ready statistical tables using gt, kableExtra, or flextable. Covers descriptive statistics, regression results, ANOVA tables, correlation matrices, and APA formatting. Use when creating descriptive statistics tables, formatting regression or ANOVA output, building correlation matrices, producing APA-style tables for academic papers, or generating tables for Quarto and R Markdown documents.

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Fit cognitive drift-diffusion models (Ratcliff DDM) to reaction time and accuracy data with parameter estimation (drift rate, boundary separation, non-decision time), model comparison, and parameter recovery validation. Use when modeling binary decision-making with reaction time data, estimating cognitive parameters from experimental data, comparing sequential sampling model variants, or decomposing speed-accuracy tradeoff effects into latent cognitive components.

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Separate expensive observation from cheap decision-making in autonomous agent loops using a two-clock architecture. A fast clock accumulates data into a digest file; a slow clock reads the digest and acts only when something is pending. Idle cycles cost nothing because the action clock returns immediately after reading an empty digest. Use when building autonomous agents that must observe continuously but can only afford to act occasionally, when API or LLM costs dominate and most cycles have nothing to do, when designing cron-based agent architectures with observation and action phases, or when an existing heartbeat loop is too expensive because it calls the LLM on every tick.

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Establish Service Level Objectives (SLO), Service Level Indicators (SLI), and Service Level Agreements (SLA) with error budget tracking, burn rate alerts, and automated reporting using Prometheus and tools like Sloth or Pyrra. Use when defining reliability targets for customer-facing services, balancing feature velocity against system reliability through error budgets, migrating from arbitrary uptime goals to data-driven metrics, or implementing Site Reliability Engineering practices.

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Decommission a validated computerized system at end-of-life. Covers data retention assessment by regulation, data migration validation (mapping, transformation, reconciliation), archival strategy, access revocation, documentation archival, and stakeholder notification. Use when a validated system is being replaced, reaching end-of-life without replacement, vendor support is discontinued, multiple systems are consolidating, or regulatory changes render a system obsolete.

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