Research, academic papers, education, and exam prep (4.4K skills)
Find research papers and preprints on arXiv, collect titles, authors, abstracts, and publication details, and save available PDFs, HTML full texts, or LaTeX source files. Search by topic, author, date, or a specific arXiv ID.
Use AlphaGenome scores to investigate predicted molecular effects of genetic variants, annotate variant files, and rank research candidates. Scan genomic regions for single nucleotide substitutions and retrieve matching gene structures, including exon and splice junction coordinates.
Search PubChem by chemical name, identifier, or molecular structure to retrieve properties, hazards, and pharmacology information. Find similar molecules or compounds containing a chosen structural fragment, and retrieve structure images and biological assay data.
Retrieve protein and nucleotide sequences from NCBI using accession numbers, gene names, organisms, locus tags, PubMed articles, or patent numbers. Translate coding regions into protein sequences and search by organism and expected length when other identifiers are unavailable.
Search open-access life-science literature in Europe PMC by keyword, author, or article identifier. Download available PDFs and full texts as plain text or XML, and retrieve reference lists and papers that cite a study.
Query QuickGO to connect genes with biological processes, molecular functions, and cellular locations. Find genes linked to a functional term, explore relationships between terms, and check the evidence supporting each annotation.
Retrieve evolutionary conservation scores and transcription factor binding sites from UCSC Genome Browser. Examine how genomic positions have changed across species and locate sites where gene-regulating proteins may bind, supporting analysis of variants and regulatory regions.
Explore ENCODE data to find candidate DNA regions that regulate gene activity. Retrieve cell-specific annotations, nearby or linked genes, gene expression measurements, and experiment or file records, including ChIP-seq peaks, through the supplied scripts.
Find proteins with similar three-dimensional shapes by submitting a structure file to the Foldseek API. Review leading matches, interpret similarity and coverage measures, summarize annotated functions, and save results as Markdown and JSON.
Create links that open specific genetic variants or genomic regions in AlphaGenome Atlas. Set tissue and display filters, build linked candidate tables, and open charts comparing predictions for reference and alternate DNA sequences.
Search PubMed for biomedical papers and published clinical trials, retrieve abstracts and open-access full text, and connect papers with gene or compound records. Resolve incomplete citations and retrieve larger sets of references in batches.
Look up short genetic variants in NCBI's dbSNP database. Connect rsIDs, identifiers for known variants, with genomic coordinates and HGVS variant descriptions, retrieve associated genes and allele frequencies, or search a chromosome region.
Look up genes in Ensembl, translate identifiers between biological databases, and retrieve DNA or protein sequences. The skill also provides transcript structures and VEP predictions, which describe possible molecular effects of genetic variants.
Explore disease-associated genes and known drugs using Open Targets Platform. Retrieve genetic evidence, predictions linking variants to genes, and information on whether a target can be addressed by drugs, including available safety data.
Search OpenAlex for academic papers, author publications, and institutional research. Look up papers by DOI, a persistent publication identifier, summarize citation data, and download open-access PDFs through the included command-line tool.
Find DNA binding profiles for transcription factors, proteins that regulate genes, in JASPAR. Resolve gene names to matrix IDs, retrieve binding patterns and metadata, and export profiles in formats used by sequence analysis tools.
Search openFDA for adverse event reports, recalls, labeling, approvals, and other regulatory records covering drugs, devices, foods, and more. Summarize field counts and download matching records as JSON files for further analysis.
Look up human genetic variants in ClinVar to retrieve disease-related classifications, review status, associated conditions, and evidence from submitting laboratories. Compare conflicting interpretations or find variants classified as pathogenic for benchmark controls.
Look up human proteins in the Human Protein Atlas to see their abundance by tissue and location within cells. Retrieve expression levels reported as categories, search for matching genes, and compare protein findings with RNA expression data.
Analyze Latin and Ancient Greek inscriptions to restore missing characters, estimate their place and date of origin, and find parallel texts. Review model predictions in tables and an HTML dashboard, with optional numerical text representations for further analysis.
Search UniProt for proteins and retrieve their functions, amino acid sequences, organism information, and linked publications. Convert identifiers between databases, collect large sets of records, or retrieve earlier versions of protein entries.
Search ChEMBL for compounds, drug targets, and measured biological activity. Retrieve drug mechanisms, compare activity values in a common unit, find similar chemical structures, and download structure files or images for further analysis.
Look up biomedical terms in EMBL-EBI OLS across more than 250 ontologies, structured vocabularies that connect related concepts. Find definitions, synonyms, and identifiers, then explore broader categories, subtypes, and relationships such as anatomical parts.
Search InterPro to identify protein families, functional regions called domains, and important sites. Find proteins with shared domain arrangements, examine their distribution across species, and supplement missing annotations with clearly identified InterPro-N deep learning predictions.