Find skills for tasks involving NVIDIA products or GPU computing using the live catalog. Get up to three relevant recommendations, with reasons, installation commands, and starter prompts; installation requires explicit approval.
Set up and operate NVIDIA AI-Q Blueprint locally or on your own infrastructure. Choose a deployment mode, configure credentials, check service health, troubleshoot failures, and provide a verified server address for aiq-research.
Plan DNA variant detection workflows by identifying the assay and sample model, then routing to germline, cancer somatic, or molecular-barcode panel skills. It also supports focused local BAM/CRAM checks with variant files, depth summaries, and optional filters.
Check whether a next-generation sequencing workflow has the tools, packages, reference data, and databases it needs. Generate installation and resource setup plans, record available resources, and compare them before rerunning an analysis.
Prepare single-cell or single-nucleus RNA-seq analysis by checking inputs and selecting workflows that turn FASTQ sequencing files into count matrices. Route quality checks, cell annotation, clustering, and UMAP visualization to the embedded downstream skill.
Analyze Mixpanel data with Python to explore usage trends, conversion steps, returning users, and differences between user groups. Also manage business context documents that explain an organization's structure and goals to AI assistants.
Routes bulk RNA-seq requests to workflows for generating expression counts and checking quality, or comparing gene expression between groups. Checks input data, sample information, and analysis requirements before directing the next step.
Find the right workflow for next-generation sequencing data by inspecting files and clarifying only missing setup details. Receive a recommended analysis skill, checks of available tools, and plans for software installation and reference data.
Validate FASTQ sequencing files, run local quality checks, and interpret reports to decide whether trimming is needed. Optionally remove adapters or low-quality read ends while preserving original reads and their quality reports.
Turn conversations and notes into structured Notion pages, including wiki entries, how-to guides, FAQs, and decision logs. Capture context and sources, connect related pages, and maintain owners and status as information changes.
Look up Gene Ontology terms, which classify gene functions, and their links to gene products through QuickGO. Get concise summaries, explore broader or narrower terms, and save full responses when needed.
Plan or run ATAC-seq analysis to identify accessible DNA regions. Check sequencing quality, align reads, detect peaks, combine evidence across replicate samples, and prepare comparisons between conditions with quality summaries and visualization tracks.
Plan or run inherited DNA variant detection from whole-genome, exome, or targeted-panel sequencing. Check reference compatibility, sample quality, and combined analysis across samples, with documented commands, resource versions, and paths to variant and annotation outputs.
Query ProteomeXchange through its PROXI API to inspect datasets, libraries, proteins, peptide forms, and spectra. Receive concise summaries focused on a dataset or identifier, and save complete responses when more detail is needed.
Plan or run bulk RNA-seq analysis to find genes whose expression differs between conditions. Check sample replication, study design, batch effects, and data quality, then produce comparison tables, diagnostic plots, and ranked gene lists.
Plan or run bulk RNA-seq processing from sequencing reads to count matrices, tables of expression counts across samples. Check sample metadata, reference consistency, read mapping, and quantification quality, and produce summaries for downstream analysis.
Analyze marker-gene sequencing data to study microbial communities. Supports FASTQ quality checks and, with primers, metadata, and taxonomy resources, workflows that produce sequence variant tables, taxonomic assignments, diversity measurements, and plots.
Build or review quality control workflows for single-cell and single-nucleus RNA sequencing data. Select filters from observed data, detect doublets, assign cell types, and create UMAP plots that summarize cell relationships, while recording analysis decisions and outputs.
Manage Mixpanel Headless login and connection settings, check credentials, and switch accounts, projects, or workspaces. Save named combinations of these settings as targets so an agent can select the intended connection together.
Find and inspect UI components in MagicPath, add them to an app, and adapt their behavior and styling. Apply themes or create and edit canvas components from code, including work based on an existing repository interface.
Look up one genetic variant in UKB-TOPMed and summarize its associations with traits. Accept rsID identifiers or GRCh37 and GRCh38 coordinates, resolve the required query format, and report association totals and any result truncation.
Query STRING for protein interaction networks, interaction partners, and enrichment results showing functions common in a gene set. Receive concise summaries with limited result counts, with options for machine-readable JSON or saved full results.
Retrieve focused information from PubChem, including molecular formulas, molecular weights, compound descriptions, assay summaries, and substance metadata. Get concise Markdown summaries, with the option to save the full response for further use.
Plan or run quality checks and peak calling, which identifies enriched genomic regions, for ChIP-seq, CUT&RUN, and CUT&Tag. The workflow accounts for controls and replicates and prepares signal tracks, quality reports, and differential binding designs.
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