501 skills · sorted by relevance
Set up MISP to collect threat feeds and centrally manage indicators such as suspicious IP addresses and domains. Configure automated synchronization, connect related findings, and export indicators to security monitoring platforms or blocklists.
Build an automated workflow that collects suspicious files, checks known malware records, and submits unknown samples to isolated analysis environments. Generate verdicts and indicators of compromise, then send results to security monitoring systems.
Installs a self-contained conda instance that is managed by the R/Bioconductor installation machinery. This aims to provide a consistent Python environment that can be used reliably by Bioconductor packages. Functions are also provided to e
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Workflow for enriching raw IOCs. Routes each IOC type to the appropriate /lookup-* skills, optionally correlates against MISP, and synthesises a single enrichment record per indicator. Use when the user has a batch of raw IOCs to process before triage or before pushing into a sharing platform.
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Pivots on indicators of compromise across multiple data sources by correlating a seed set of IOCs against logs to find co-occurring indicators, hosts, and timeframes that expand the investigation. Activates for requests to pivot on IOCs, correlate indicators across data sources, or expand an investigation from a seed indicator set.
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Expert-level biochemistry from a biology perspective covering metabolic pathways, enzyme kinetics, bioenergetics, signal transduction, and the biochemical basis of cellular processes.
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Systematically collects, categorizes, and distributes indicators of compromise (IOCs) during and after security incidents to enable detection, blocking, and threat intelligence sharing. Covers network, host, email, and behavioral indicators using STIX/TAXII formats and threat intelligence platforms. Activates for requests involving IOC collection, indicator extraction, threat indicator sharing, compromise indicators, STIX export, or IOC enrichment.
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Automates the enrichment of raw indicators of compromise with multi-source threat intelligence context using SOAR platforms, Python pipelines, or TIP playbooks to reduce analyst triage time and standardize enrichment outputs. Use when building automated enrichment workflows integrated with SIEM alerts, email submission pipelines, or bulk IOC processing from threat feeds. Activates for requests involving SOAR enrichment, Cortex XSOAR, Splunk SOAR, TheHive, Python enrichment pipelines, or automated IOC processing.
The English summary is being prepared. Showing the original description.
Systematically collects, categorizes, and distributes indicators of compromise (IOCs) during and after security incidents to enable detection, blocking, and threat intelligence sharing. Covers network, host, email, and behavioral indicators using STIX/TAXII formats and threat intelligence platforms. Activates for requests involving IOC collection, indicator extraction, threat indicator sharing, compromise indicators, STIX export, or IOC enrichment.
The English summary is being prepared. Showing the original description.
Automates the enrichment of raw indicators of compromise with multi-source threat intelligence context using SOAR platforms, Python pipelines, or TIP playbooks to reduce analyst triage time and standardize enrichment outputs. Use when building automated enrichment workflows integrated with SIEM alerts, email submission pipelines, or bulk IOC processing from threat feeds. Activates for requests involving SOAR enrichment, Cortex XSOAR, Splunk SOAR, TheHive, Python enrichment pipelines, or automated IOC processing.
The English summary is being prepared. Showing the original description.
Systematically collects, categorizes, and distributes indicators of compromise (IOCs) during and after security incidents to enable detection, blocking, and threat intelligence sharing. Covers network, host, email, and behavioral indicators using STIX/TAXII formats and threat intelligence platforms. Activates for requests involving IOC collection, indicator extraction, threat indicator sharing, compromise indicators, STIX export, or IOC enrichment.
The English summary is being prepared. Showing the original description.
Automates the enrichment of raw indicators of compromise with multi-source threat intelligence context using SOAR platforms, Python pipelines, or TIP playbooks to reduce analyst triage time and standardize enrichment outputs. Use when building automated enrichment workflows integrated with SIEM alerts, email submission pipelines, or bulk IOC processing from threat feeds. Activates for requests involving SOAR enrichment, Cortex XSOAR, Splunk SOAR, TheHive, Python enrichment pipelines, or automated IOC processing.
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Investigate suspected malicious changes in open-source software on GitHub by comparing repository history, APIs, and archives. Attempt to recover deleted evidence, identify signs of compromise, and produce a report separating verified facts from hypotheses.
Analyze suspected malware through code inspection and behavior observed in an isolated environment. Extract indicators of compromise, such as suspicious domains and file paths, and create YARA file-matching rules or Sigma behavior-detection rules from the findings.
Investigate suspicious domains, scams, impersonation, and malicious activity using public sources. Preserve source details, check leads against independent evidence, and prepare a threat intelligence handoff that records confidence, verification status, and remaining gaps.
Observe malware in an isolated Cuckoo Sandbox environment and review its processes, network traffic, and system changes. Use the findings to trace infection stages, identify persistence mechanisms, and extract indicators of compromise for behavioral reports.
The 'msa' package provides a unified R/Bioconductor interface to the multiple sequence alignment algorithms ClustalW, ClustalOmega, and Muscle. All three algorithms are integrated in the package, therefore, they do not depend on any externa
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standR is an user-friendly R package providing functions to assist conducting good-practice analysis of Nanostring's GeoMX DSP data. All functions in the package are built based on the SpatialExperiment object, allowing integration into various spatial transcriptomics-related packages from Bioconductor. standR allows data inspection, quality control, normalization, batch correction and evaluation with informative visualizations.
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This package provides a client for the Bioconductor AnnotationHub web resource. The AnnotationHub web resource provides a central location where genomic files (e.g., VCF, bed, wig) and other resources from standard locations (e.g., UCSC, En
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NanoTube includes functions for the processing, quality control, analysis, and visualization of NanoString nCounter data. Analysis functions include differential analysis and gene set analysis methods, as well as postprocessing steps to help understand the results. Additional functions are included to enable interoperability with other Bioconductor NanoString data analysis packages.
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Provides large-scale single-cell omics data manipulation using Genomic Data Structure (GDS) files. It combines dense and sparse matrices stored in GDS files and the Bioconductor infrastructure framework (SingleCellExperiment and DelayedArray) to provide out-of-memory data storage and large-scale manipulation using the R programming language.
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InterCellar is implemented as an R/Bioconductor Package containing a Shiny app that allows users to interactively analyze cell-cell communication from scRNA-seq data. Starting from precomputed ligand-receptor interactions, InterCellar provides filtering options, annotations and multiple visualizations to explore clusters, genes and functions. Finally, based on functional annotation from Gene Ontology and pathway databases, InterCellar implements data-driven analyses to investigate cell-cell comm
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Provides functionalities to visualize and contextualize CRISPR guide RNAs (gRNAs) on genomic tracks across nucleases and applications. Works in conjunction with the crisprBase and crisprDesign Bioconductor packages. Plots are produced using the Gviz framework.
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Given a matrix of counts (e.g. from featureCounts) and optional information about the genes, this tool performs differential expression (DE) using the limma Bioconductor package and produces plots and tables useful in DE analysis. Interacti
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