11.3K skills · sorted by relevance
Predict structures of complexes containing proteins, DNA, RNA, and ligands with OpenFold3, an AlphaFold3 reproduction with publicly available model weights. Prepare JSON inputs, generate candidate structures, and inspect confidence scores and molecular clashes.
Predict three-dimensional structures of complexes containing proteins, RNA, DNA, and small molecules with Chai-1. Compare candidate structures using confidence scores and clash indicators, or run repeated predictions from Python to evaluate designed binders.
Adapt an academic paper’s title and section structure to a target journal. The skill proposes heading, numbering, and organizational changes, then updates main.tex while preserving the paper’s arguments, results, tables, and citations.
Generate JSON-LD structured data, code that describes page content to search engines, for FAQ, HowTo, Article, Product, LocalBusiness, or combined schemas. Check Google requirements and get guidance on adding the markup to a page.
Work with crystal structures and materials calculations in Python. Convert structure files, examine symmetry and stability, analyze electronic properties, prepare calculation inputs, and retrieve computed materials data from Materials Project using pymatgen and its supporting tools.
Golang struct and interface design patterns — composition, embedding, type assertions, type switches, interface segregation, dependency injection via interfaces, struct field tags, and pointer vs value receivers. Use this skill when designing Go types, defining or implementing interfaces, embedding structs or interfaces, writing type assertions or type switches, adding struct field tags for JSON/YAML/DB serialization, or choosing between pointer and value receivers. Also use when the user asks about "accept interfaces, return structs", compile-time interface checks, or composing small interfaces into larger ones.
The English summary is being prepared. Showing the original description.
End-to-end finite element analysis in MATLAB PDE Toolbox — geometry creation, model setup, solve, and post-processing in one skill. Use when building geometry from primitives or file import, setting up femodel with BCs/loads/materials, solving thermal/structural/EM problems, and extracting or visualizing results. Covers fegeometry, multicuboid, multicylinder, multisphere, decsg, boolean ops, mesh generation, femodel, all AnalysisTypes (thermalSteady, thermalTransient, structuralStatic, structuralTransient, structuralModal, structuralFrequency, electrostatic, magnetostatic, dcConduction, harmonic EM), materialProperties, faceBC, faceLoad, cellLoad, vertexLoad, solve, interpolation, von Mises stress, principal stress, reaction forces, heat flux, pdeplot3D visualization. Triggers on: PDE Toolbox, finite element, FEA, thermal analysis, structural analysis, electromagnetic analysis, femodel, mesh, boundary conditions, stress, displacement, heat transfer, post-processing.
The English summary is being prepared. Showing the original description.
AWS Cloud Development Kit (CDK) expert for building cloud infrastructure with TypeScript/Python. Use when creating CDK stacks, defining CDK constructs, implementing infrastructure as code, or when the user mentions CDK, CloudFormation, IaC, cdk synth, cdk deploy, or wants to define AWS infrastructure programmatically. Covers CDK app structure, construct patterns, stack composition, and deployment workflows.
The English summary is being prepared. Showing the original description.
Extract structured data from construction documents using LLMs. Process RFIs, submittals, contracts, specifications. Convert unstructured PDFs to structured JSON/Excel.
The English summary is being prepared. Showing the original description.
Classify construction data by type (structured, unstructured, semi-structured). Analyze data sources and recommend appropriate storage/processing methods
The English summary is being prepared. Showing the original description.
Comprehensive Pandas toolkit for construction data analysis. Filter, group, aggregate BIM elements, calculate quantities, merge datasets, and generate reports from structured construction data.
The English summary is being prepared. Showing the original description.
Query RCSB PDB for experimental protein structures. Use when user asks about crystal structures, X-ray, cryo-EM, NMR structures, or PDB IDs. Triggers on "pdb", "crystal structure", "cryo-em", "x-ray structure", "protein crystal", "experimental structure".
The English summary is being prepared. Showing the original description.
Constructs plan of reorganization models with debt-for-equity conversion, new money injection, and emergence capital structure. Use when modeling restructuring plans, designing emergence capital structures, or analyzing plan feasibility.
The English summary is being prepared. Showing the original description.
Deconstructs structured note payoffs with embedded option identification, issuer credit risk, and all-in cost analysis. Use when analyzing structured notes, evaluating embedded options, or assessing structured product costs.
The English summary is being prepared. Showing the original description.
Optimize oversized agent instruction files using progressive disclosure. Handles CLAUDE.md (Claude Code), AGENTS.md (OpenAI Codex / GitHub Copilot agents), and copilot-instructions.md (GitHub Copilot). Auto-detects all three formats in your repo, analyzes content tiers, creates sub-documents using each format's native mechanism, and rewrites the main file with zero information loss. Triggers: optimize CLAUDE.md, AGENTS.md too long, reduce copilot-instructions.md, agent instructions file too large, shrink context file, apply progressive disclosure, instructions file bloated
The English summary is being prepared. Showing the original description.
"Apply constructivist learning theory to design instruction based on active knowledge construction, scaffolding, and the zone of proximal development. Use this skill when the user needs to design learner-centered instruction, apply Vygotsky's ZPD or scaffolding principles, or evaluate learning environments for constructivist alignment — even if they say 'how do people really learn', 'student-centered design', or 'scaffolding for learners'.".
The English summary is being prepared. Showing the original description.
Manages cloud infrastructure through natural language conversations with Pulumi Neo, an AI agent for platform engineers. Enables infrastructure analysis, resource provisioning, stack deployment, and configuration management via conversational AI. Use when creating Neo tasks, requesting infrastructure analysis, automating cloud deployments, managing infrastructure as code (IaC), provisioning AWS/Azure/GCP resources, managing infrastructure through natural language prompts, reviewing PRs with Neo, handling Neo approval workflows, or checking Neo task status and events. Also use when the user mentions "Pulumi Neo", "Neo task", "Neo agent", or wants AI-assisted infrastructure management.
The English summary is being prepared. Showing the original description.
Complete construction estimating and cost management system. Use when preparing project estimates, bid proposals, cost breakdowns, value engineering, change order management, or construction budget tracking. Covers residential, commercial, and infrastructure projects. Trigger on 'estimate', 'construction cost', 'bid', 'takeoff', 'cost breakdown', 'change order', 'value engineering', 'construction budget', 'unit pricing', 'RSMeans'.
The English summary is being prepared. Showing the original description.
Data structures and serialization formats for agent-to-agent communication. Covers message envelopes, structured output schemas, capability declarations, task handoff payloads, error/retry signaling, and context windows as data structures. Deep comparison of A2A protocol, MCP, OpenAI function calling, and LangChain message types. Teaches when to use rigid schemas vs free-form with validation, typed vs untyped, streaming vs batch. Activate on: "agent message format", "agent communication schema", "agent-to-agent protocol", "A2A protocol", "MCP message format", "structured output for agents", "agent interop", "interchange format", "agent serialization", "task handoff format", "capability declaration". NOT for: what agents say to each other (use agent-conversation-protocols), orchestration topology (use multi-agent-coordination), building agent infrastructure (use agentic-infrastructure-2026).
The English summary is being prepared. Showing the original description.
AWS Cloud Development Kit (CDK) expert for building cloud infrastructure with TypeScript/Python. Use when creating CDK stacks, defining CDK constructs, implementing infrastructure as code, or when the user mentions CDK, CloudFormation, IaC, cdk synth, cdk deploy, or wants to define AWS infrastructure programmatically. Covers CDK app structure, construct patterns, stack composition, and deployment workflows.
The English summary is being prepared. Showing the original description.
Extract structured data from LLM responses with Pydantic validation, retry failed extractions automatically, parse complex JSON with type safety, and stream partial results with Instructor - battle-tested structured output library
The English summary is being prepared. Showing the original description.
Classify every destructive/gated action an agent body can attempt (git, filesystem, network, shell, github) into block/approve/allow tiers, and audit whether the pre-tool and post-tool governance backing that classification is real: blocked actions proven zero-side-effect by a negative fixture, every denial backed by a receipt and a transcript event, every block-tier denial paired with a safe alternative, and no unmanaged or same-UID body ever marked "contained." Use when building or reviewing Agent Harbor's C5 governance gate (destructive git blocker, approval request/result, denial receipts), gating a new tool surface before it can run destructive commands, or auditing whether an existing "destructive-action blocked" claim actually has evidence behind it. NOT for proving an existing sandbox boundary actually contains an adversary once an action is isolated (use sandboxed-adversarial-test-harness), deciding where in a DAG to place a human review node or designing the approval UX itself (use human-gate-designer), or designing the general work-receipt schema across an entire agent task (use agent-work-receipt-designer).
The English summary is being prepared. Showing the original description.
Data structures and serialization formats for agent-to-agent communication. Covers message envelopes, structured output schemas, capability declarations, task handoff payloads, error/retry signaling, and context windows as data structures. Compares the version-pinned A2A, MCP, and JSON-RPC role boundaries covered by this bundle; OpenAI and LangChain-specific APIs require their own current sources. Teaches when to use rigid schemas versus free-form content with validation, typed versus untyped boundaries, and streaming versus batch. Activate on: "agent message format", "agent communication schema", "agent-to-agent protocol", "A2A protocol", "MCP message format", "structured output for agents", "agent interop", "interchange format", "agent serialization", "task handoff format", "capability declaration". NOT for: what agents say to each other (use agent-conversation-protocols), orchestration topology (use multi-agent-coordination), building agent infrastructure (use agentic-infrastructure-2026).
The English summary is being prepared. Showing the original description.
Extract structured data from LLM responses with Pydantic validation, retry failed extractions automatically, parse complex JSON with type safety, and stream partial results with Instructor - battle-tested structured output library
The English summary is being prepared. Showing the original description.