Results for “processing”

Identify direct miRNA-target interactions from AGO HITS-CLIP, AGO-CLEAR-CLIP (chimeric reads), HEAP (Halo-Ago2 mouse), chimeric eCLIP / miR-eCLIP (deep miRNA-target profiling), or CLASH using chimeric-read processing pipelines, seed-pairing analysis, and 3' auxiliary pairing rules. Use when distinguishing direct miRNA targets from indirect, integrating CLIP-derived target maps with TargetScan / miRDB / DIANA predictions, applying canonical 7mer-8mer seed matching with 3' UTR context, or recovering miRNA-mRNA chimeras at scale.

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Trim PCR primers from aligned reads in amplicon-panel BAMs using samtools ampliconclip. Use when processing SARS-CoV-2 ARTIC, hereditary cancer panels, ctDNA hot-spot panels, or any amplicon assay where primer-derived bases would falsely confirm reference at primer footprints.

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Spring Boot architecture patterns, REST API design, layered services, data access, caching, async processing, and logging. Use for Java Spring Boot backend work.

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Inventory staged local EcoSIM data at project startup and validate input readiness for a selected site, simulation period, and preprocessing or analysis workflow. Use before data-dependent work or when relevant inputs change.

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Azure Queue Storage SDK for Python. Use for reliable message queuing, task distribution, and asynchronous processing.

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Azure AI Text Analytics SDK for sentiment analysis, entity recognition, key phrases, language detection, PII, and healthcare NLP. Use for natural language processing on text.

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非同期処理のバックエンドとフロントエンドを実装する際のベストプラクティスをまとめたスキルです。非同期処理が必要なWebサービスのフロントエンドおよびバックエンドを実装する際に利用されます。

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Download NASA GES DISC NLDAS_FORA0125_H version 2.0 primary hourly forcing data for a point location. Use when Codex needs to retrieve NLDAS File A meteorological forcing from the GES DISC API or HTTPS archive for a longitude/latitude pair, including Earthdata username/password authentication, hourly URL generation, nearest-grid-point extraction, CSV output, or EcoSIM climate-forcing preprocessing.

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Extract typical annual GPP, annual evapotranspiration, mid-season LAI, mid-season root biomass, mid-season shoot biomass, median canopy height, maximum primary-root depth, Vcmax at 25oC, and Jmax at 25oC from EcoSIM h0 NetCDF output files. Use when asked to derive these EcoSIM output targets from a selected .ecosim.h0.*.nc file for model-output processing, trait checks, or benchmark summaries.

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Download Copernicus CDS ERA5 single-level point time-series climate forcing for non-US or non-NLDAS EcoSIM sites from longitude/latitude coordinates. Use when a paper-derived site is outside the NLDAS domain, lacks AmeriFlux/FLUXNET curated forcing, or needs global ERA5 variables such as 2m temperature, dewpoint temperature, surface pressure, solar radiation, precipitation, and 10m wind components for EcoSIM preprocessing.

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OpenAI's general-purpose speech recognition model. Supports 99 languages, transcription, translation to English, and language identification. Six model sizes from tiny (39M params) to large (1550M params). Use for speech-to-text, podcast transcription, or multilingual audio processing. Best for robust, multilingual ASR.

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Process and extract information from PDF documents. Use this skill when the user asks to read, analyze, or extract data from PDF files.

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Process, parse, create, and manipulate Microsoft Word (.docx) documents programmatically using libraries like docx or mammoth.js for document generation and data extraction. Use when generating Word documents from templates, extracting text and formatting from .docx files, creating reports and invoices, parsing resumes and forms, converting Word to HTML, creating mail merge documents, or automating document workflows.

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Organize, categorize, track, and manage invoices systematically with automated extraction of invoice data, payment tracking, and financial organization. Use when processing invoice uploads, extracting invoice details (date, amount, vendor), categorizing expenses, tracking payment status, organizing receipts, generating financial reports, or building accounting and bookkeeping systems.

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Analyze meeting transcripts, recordings, and notes to extract action items, key decisions, topics, sentiment, and generate summaries using NLP and AI. Use when processing meeting transcripts, extracting action items, summarizing discussions, identifying key decisions, tracking topics and themes, analyzing sentiment, generating meeting notes, or building collaboration and productivity tools.

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Process, parse, create, and manipulate PDF documents using libraries like pdf-lib, PDFKit, or pdf-parse for document generation, data extraction, and PDF manipulation. Use when generating PDFs from HTML, extracting text from PDFs, merging or splitting PDFs, adding watermarks, filling PDF forms, creating invoices and reports, parsing legal documents, or building document management systems.

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Process, parse, create, and manipulate Excel spreadsheets (.xlsx, .xls) using libraries like xlsx, exceljs, or SheetJS for data import/export and spreadsheet automation. Use when reading Excel files for data import, generating Excel reports, exporting data to spreadsheets, parsing bulk uploads, creating financial reports, manipulating workbooks and worksheets, or building data export features.

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Bulk-retouch a folder of portrait photos using Adobe tools — designed for wedding photographers and event photographers who need fast, walk-away batch processing. Use this skill when the user says "retouch my photos", "batch process these portraits", "process my wedding photos", "clean up this folder of images", "run my headshots through Adobe", or uploads/selects a folder of photos and wants them polished and ready to review. Automatically applies auto-straighten, auto-tone, and auto-light to every image. Outputs a preview grid and download folder. Access: 🔐 Signed-In required | Gen AI: ❌

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Payment processing integration with Stripe and PayPal for Flutter

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Braintree Automation: manage payment processing via Stripe-compatible tools for customers, subscriptions, payment methods, and transactions

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BullMQ expert for Redis-backed job queues, background processing, and reliable async execution in Node.js/TypeScript applications. Use when: bullmq, bull queue, redis queue, background job, job queue.

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Azure Queue Storage SDK for Python. Use for reliable message queuing, task distribution, and asynchronous processing.

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Azure AI Text Analytics SDK for sentiment analysis, entity recognition, key phrases, language detection, PII, and healthcare NLP. Use for natural language processing on text.

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Segment single cells from multiplexed IMC/MIBI tissue images using Mesmer/DeepCell, Cellpose, or ilastik+CellProfiler, covering whole-cell vs nuclear segmentation, the summed-membrane-channel decision, nuclear-expansion bias, lateral spillover, resolution-floor parameters, and downstream-proxy evaluation. Use when delineating cells after preprocessing, choosing a segmentation model, building a cell mask for quantification, diagnosing impossible double-positive populations, or troubleshooting over/under-segmentation.

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