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cccskills

Results for “php”

270 skills · sorted by relevance

Predict RBP binding from RNA sequence using deep learning models (RBPNet sequence-to-signal, RNAProt RNN, GraphProt2 GCN with structure, DeepCLIP, DeepRiPe multi-modal CNN) for variant-effect prediction, in silico binding-site discovery, model interpretation, and transfer learning from CLIP and RBNS datasets. Use when computational prediction of RBP binding from sequence is needed, evaluating variant effects on binding without further wet-lab experiments, comparing model performance, or training a custom model on ENCODE eCLIP data.

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peacezha/HPClaw3Updated Oct 11, 2026

Generates PSR-6 Cache implementation for PHP 8.5. Creates CacheItemPoolInterface and CacheItemInterface implementations with TTL handling and deferred saves. Includes unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates DDD Repository interfaces and implementation stubs for PHP 8.5. Creates domain interfaces in Domain layer, implementation in Infrastructure.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates ADR Responder classes for PHP 8.5. Creates HTTP response builders with PSR-7/PSR-17 support. Includes unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates Saga pattern components for PHP 8.5. Creates Saga interfaces, steps, orchestrator, state management, and compensation logic with unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Hexagonal Architecture (Ports & Adapters) knowledge base. Provides patterns, antipatterns, and PHP-specific guidelines for Hexagonal Architecture audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates Strategy pattern for PHP 8.5. Creates interchangeable algorithm families with context class, strategy interface, and concrete implementations. Includes unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates Test Data Builder and Object Mother patterns for PHP 8.5. Creates fluent builders with sensible defaults and factory methods for test data creation.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates PSR-20 Clock implementation for PHP 8.5. Creates ClockInterface implementations including SystemClock, FrozenClock, and OffsetClock for time abstraction and testing. Includes unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates DDD Value Objects for PHP 8.5. Creates immutable, self-validating objects with equality comparison. Includes unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Layered Architecture knowledge base. Provides patterns, antipatterns, and PHP-specific guidelines for traditional N-tier/Layered Architecture audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates PSR-3 Logger implementation for PHP 8.5. Creates LoggerInterface implementations with log levels, context interpolation, and LoggerAwareTrait usage. Includes unit tests.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Outbox Pattern knowledge base. Provides patterns, antipatterns, and PHP-specific guidelines for transactional outbox, polling publisher, and reliable messaging audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

PSR-4 autoloading standard knowledge base for PHP 8.5 projects. Provides quick reference for namespace-to-path mapping, composer.json configuration, directory structure, and common mistakes. Use for autoloading audits and project structure reviews.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

PHP Standards Recommendations (PSR) overview knowledge base. Provides comprehensive reference for all accepted PSRs including PSR-1,3,4,6,7,11,12,13,14,15,16,17,18,20. Use for PSR selection decisions and compliance audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

GRASP principles knowledge base for PHP 8.5 projects. Provides quick reference for 9 responsibility assignment patterns (Information Expert, Creator, Controller, Low Coupling, High Cohesion, Polymorphism, Pure Fabrication, Indirection, Protected Variations). Use for architecture audits and design decisions.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Event Sourcing knowledge base. Provides patterns, antipatterns, and PHP-specific guidelines for Event Sourcing architecture audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates README.md files for PHP projects. Creates structured documentation with badges, installation, usage, and examples.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Saga Pattern knowledge base. Provides patterns, antipatterns, and PHP-specific guidelines for saga orchestration, choreography, and distributed transaction audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates troubleshooting guides and FAQ sections for PHP projects. Creates problem-solution documentation.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Generates Getting Started guides for PHP projects. Creates step-by-step tutorials for first-time users.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

PSR-1 and PSR-12 coding standards knowledge base for PHP 8.5 projects. Provides quick reference for basic coding standard and extended coding style with detection patterns, examples, and antipattern identification. Use for code style audits and compliance reviews.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Stability Patterns knowledge base. Provides patterns, antipatterns, and PHP-specific guidelines for Circuit Breaker, Retry, Rate Limiter, Bulkhead, and resilience audits.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026

Detects code smells in PHP codebases. Identifies God Class, Feature Envy, Data Clumps, Long Parameter List, Long Method, Primitive Obsession, Message Chains, Inappropriate Intimacy. Generates actionable reports with refactoring recommendations.

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MikeCheng1208/BattleTree2Updated Jul 22, 2026