Results for “scientific”

Work with large scientific arrays by storing data in smaller blocks and reading selected portions. Guides compression, cloud storage, format migration, and NumPy, Dask, or Xarray integration while preserving dimensions, units, and other metadata.

• Reading selected regions of large scientific arrays
• Choosing data blocks and compression settings
• Working with scientific arrays stored on S3 or GCS

Find scientific datasets, AI models, methodology posts, and interactive demos through the Hugging Science catalog. Compare candidates for a research task and verify their licenses, input formats, access requirements, and supported ways to run them.

• Finding models for protein or genome analysis
• Selecting datasets for scientific machine learning
• Comparing resource licenses and runtime requirements

Assess scientific claims by examining study design, statistics, bias, and evidence quality. Use structured appraisal frameworks to identify supported conclusions, explain uncertainties, and propose practical improvements with concerns traced to specific evidence.

• Check whether a paper's conclusions match its evidence
• Review study design before collecting data
• Identify statistical problems and potential biases

Draft and revise scientific manuscripts while linking claims to verified evidence. The skill organizes source records, checks consistency across text and results, tracks reporting requirements, and reviews references and disclosures, with human verification and final approval.

• Drafting manuscript sections from verified evidence
• Checking consistency across text, tables, and results
• Reviewing references and reporting checklist coverage

Turn descriptions of scientific components and relationships into PNG diagram drafts with Nano Banana 2. Gemini 3.7 Flash reviews each draft and may request one revision, while saved image versions and review logs support manual checking.

• Drafting neural network architecture diagrams
• Illustrating biological pathways
• Creating study flowcharts

Create scientific charts in Python with detailed control over axes, colors, labels, legends, and layout. Arrange multiple plots in one figure and export PNG, PDF, or SVG files for papers and presentations.

• Create charts from experimental data
• Arrange multiple plots in one figure
• Adjust colors, labels, and annotations

Create and review scientific figures with Matplotlib, Seaborn, or Plotly. The skill covers panel layouts, uncertainty, missing data, accessible color choices, and exported file checks, helping prepare figures for papers, presentations, or web publication.

• Create multi-panel figures for a paper
• Show uncertainty and missing observations clearly
• Review palette contrast and color-independent cues

Prepare constructive review drafts for scientific manuscripts, protocols, preprints, and proposals. Organize checks of claims, evidence, methods, statistics, reproducibility, ethics, figures, and citations into specific comments that a responsible human reviewer can verify and revise.

• Draft evidence-based comments on a scientific manuscript
• Check methods, statistics, and reproducibility reporting
• Choose reporting guidelines and identify missing information

Research computing toolkit for optoelectronic information science and engineering, MATLAB/Octave, Python scientific analysis, signal processing, image processing, statistics, simulation, optimization, publication figures, sensor/time-series data, citation lookup, and common scientific libraries. Use when the user asks for MATLAB code, scientific Python, data analysis, plots, simulations, formulas, statistics, machine learning, optical/physical/materials computation, or reproducible research workflows.

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Draft, revise, and audit scientific manuscripts or reports with explicit evidence provenance, reporting-guideline coverage, authorship accountability, confidentiality controls, and local consistency checks. Use for manuscript sections, references, declarations, tables, figures, or submission preparation when scientific accuracy and traceability matter.

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Create publication-quality scientific diagrams using Nano Banana 2 AI with smart iterative refinement. Uses Gemini 3.6 Flash for quality review. Only regenerates if quality is below threshold for your document type. Specialized in neural network architectures, system diagrams, flowcharts, biological pathways, and complex scientific visualizations.

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Use when creating scientific magazine cover style images or prompts, research hero visuals, journal-cover-inspired concepts, academic poster covers, PPT covers, and high-impact scientific visual concepts. If the user asks to generate the image, use ChatGPT image generation.

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Use this skill when working with scientific research tools and workflows across bioinformatics, cheminformatics, genomics, structural biology, proteomics, and drug discovery. This skill provides access to 600+ scientific tools including machine learning models, datasets, APIs, and analysis packages. Use when searching for scientific tools, executing computational biology workflows, composing multi-step research pipelines, accessing databases like OpenTargets/PubChem/UniProt/PDB/ChEMBL, performing tool discovery for research tasks, or integrating scientific computational resources into LLM workflows.

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Analyze large scientific tables with Vaex, including datasets that exceed available memory. Build calculated columns, filter rows, compute statistics, visualize aggregated data, and convert files while identifying operations that may still require substantial RAM.

• Computing statistics on tables larger than available memory
• Creating calculated features without storing full columns
• Visualizing large datasets with aggregated grids

Develop and prioritize early research ideas through independent brainstorming, structured discussion, evidence checks, and critical review. Keep assumptions, uncertainty, dissent, and scoring reasons visible, then record the human decision and appropriate next steps.

• Exploring candidate directions for a new research topic
• Organizing ideas before a research team discussion
• Comparing proposals using explicit evaluation criteria

Gather scholarly evidence for a scientific manuscript or research brief. Organize supporting and conflicting findings into references, study comparison tables, and claim-to-source maps, with search records and coverage reports that help identify gaps requiring further review.

• Gather background literature for a manuscript
• Compare supporting, conflicting, and null findings
• Build study comparison tables and claim-to-source maps

Create research presentation slides with clear structure, concise text, figures, and timing guidance. The skill supports PowerPoint, LaTeX Beamer, and image-based PDFs, with workflows for preserving original research charts and reviewing slide layouts.

• Prepare slides for a conference research talk
• Build a thesis or dissertation defense presentation
• Adapt paper content for a seminar presentation

Match scientific labels to ontology identifiers, standardized IDs for concepts such as tissues, cell types, and diseases. Checks existing IDs, labels, obsolete terms, and prefixes to support metadata annotation, submission preparation, and table audits.

• Annotating tissue, cell type, or disease fields with standard IDs
• Auditing metadata tables for incorrect IDs and labels
• Checking obsolete terms and available replacements

Plan and audit HypoGeniC workflows that use language models to propose patterns from labeled text. Check configurations, dataset splits, cost limits, and saved predictions while keeping candidate hypotheses separate from scientific confirmation.

• Reviewing task settings before a HypoGeniC run
• Checking duplicates across training and test data
• Estimating token and cost limits before model calls

Optimize scientific Python workloads for NVIDIA GPUs by choosing suitable libraries and reducing bottlenecks. Compare outputs with the CPU version and measure complete processing time, including data transfers, to determine whether the GPU implementation provides a useful improvement.

• Assess whether slow Python processing would benefit from a GPU
• Move NumPy or pandas workloads to suitable GPU libraries
• Validate GPU results against CPU outputs

Create Markdown research notes, reports, and guides with Mermaid diagrams, which describe relationships as editable text. Choose suitable diagrams for workflows, timelines, or schemas, add accessible descriptions, and check rendering in the intended destination.

• Writing research notes with workflow diagrams
• Diagramming data structures and relationships
• Creating project timelines

Generate photos, illustrations, logos, and presentation visuals through the OpenRouter Image API. Edit or combine reference images, choose among supported models, and check available settings such as resolution, output format, and transparency before generation.

• Creating illustrations and visuals for slides or posters
• Editing colors or styles in existing images
• Combining multiple reference images

Build molecular property prediction workflows with DeepChem for solubility, toxicity, and related chemistry tasks. Prepare molecular representations, choose compatible models, handle missing labels, and evaluate predictions using data splits designed for the intended scientific question.

• Predicting solubility from molecular structures
• Comparing graph models on MoleculeNet datasets
• Checking data splits for information leakage

Retrieve facts from named scientific, regulatory, economic, and other databases through documented APIs. Get results with recorded filters, retrieval dates, and record counts so another person can repeat the lookup and assess its completeness.

• Look up gene or compound records by identifier
• Collect clinical trials matching defined criteria
• Retrieve economic statistics with documented sources