add-curve-format
FreeAdd support for a new curve data format in the Curves package converter system
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Use whenever you need the Datagrok browser to actually execute JavaScript — adding viewers, filtering, modifying the view, or returning a result widget to the chat. Open this skill before calling the datagrok_exec tool.
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See how to installReview the instructions the agent will receive before you install.
The ONLY way code runs in the Datagrok browser is via the datagrok_exec tool.
Regular markdown code blocks do NOT execute.
Call datagrok_exec to perform an action the user asked for (add a viewer, filter,
open a file, run a function). For informational questions — "how do I…", "what
is…", "explain…", "can you…" — do not call datagrok_exec; find the page via
workspace/help/INDEX.md, read it, use it to find needed material, then answer in plain text.
| Variable | Type | Available |
|---|---|---|
grok | module | Always |
ui | module | Always |
DG | module | Always |
view | DG.ViewBase | Always — check view.type for specific view type |
t | DG.DataFrame | Only when view.type === 'TableView' |
The code runs in an async IIFE, so await works directly.
The tool returns {success, returnValue?, verified?, error?}.
success only means the JS did not throw — NOT that the intended effect happened. A typo'd
viewer name, a no-op, or an action that ran twice all return success: true. returnValue is
whatever object your own code chose to return; it populates the chat confirmation shown to the
user, but it is not proof — it is self-reported by the same code that took the action. Make your
code return a plain confirmation object so the user sees accurate details:
| Action | Return |
|---|---|
| open / load table | {name, rowCount} |
| add viewer | {type} |
| filter | {filteredRowCount, totalRowCount} |
| upload DataFrame | {tableInfoId} |
| save layout | {layoutId} |
| open app / view | {viewName, viewType} |
| color / sort / pin | {column} |
Error: {success: false, error: "..."} — report verbatim, do not silently retry.
Never pre-announce success before calling the tool.
Proof does not come from your own action code — it comes from re-reading live state in a fresh
scope. For any state-changing datagrok_exec, pass the verify parameter with the call:
{assertion, description}. The browser runs your action code, then immediately runs the assertion
in a fresh scope (globals grok, ui, DG, view, t) that cannot see your action's
variables, and returns its result as verified: {passed, observed?} — one round-trip, no
separate verify call needed.
The assertion is yours to design for whatever you changed: re-read that thing and return the
observed result (truthy = verified).
verified.passed: true → report the observed value, not the value you intended.
verified.passed: false (or missing) → the action is NOT confirmed — but do not assume it
failed: a faulty assertion (wrong property, wrong count, missing return) reads exactly the same.
Never re-run state-changing action code on a failed verify. First re-read the affected state
with a read-only check (a corrected datagrok_verify assertion); only if that shows the change is
genuinely absent, fix and re-run the action — re-running one that already worked creates duplicate
viewers/columns/rows. The standalone datagrok_verify tool exists for that fix-loop and for
MCP calls that changed platform state (it takes the same {assertion, description}). The runtime
blocks the turn from ending until a verification passes (bounded retries — if they run out, the
response is shown to the user flagged as unverified, so never present unverified work as done).
Only return an HTMLElement when the explicit user goal is to see output in the chat
("show me the molecule", "display the table", "draw a plot"). Never return HTMLElements for
intermediate results, confirmation data, or actions where the platform UI is the destination.
An HTMLElement return replaces the confirmation object — no returnValue is sent.
Raw scalars, strings, or DG.DataFrame will NOT render; convert via the table below:
| Result type | How to render |
|---|---|
| scalar | ui.divText(String(value)) |
| key-value pairs | ui.tableFromMap({key: value}) |
| list of items | ui.divV(items.map((x) => ui.divText(x))) |
DG.DataFrame | DG.Viewer.grid(df).root |
DG.Viewer / DG.Widget | obj.root |
DG.ViewBase (incl. apps) | open via grok.shell.addView(v) — do NOT return |
| molecule (SMILES / molblock) | grok.chem.drawMolecule(smiles, 300, 200) |
| macromolecule (HELM) | see HELM output below |
| graphics | see Graphics output below |
If an operation already exists as a top-menu command (aggregate, join, cluster,
add column, …), invoke it instead of building a custom ui.dialog. Walk the menu
with find() (chain through | groups), matching leaf text exactly:
grok.shell.topMenu.find('Data').find('Aggregate Rows...').click();
grok.shell.topMenu.find('Edit').find('Go To').find('Row...').click();
| Menu | Commands |
|---|---|
Edit | Undo, Redo, Add New Column..., Add Rows..., Column Properties..., Find and Replace..., Go To | Row..., Go To | Next Selected, Go To | Prev Selected, Remove | Selected Rows, Remove | Selected Columns, Remove | Selected Rows or Columns |
View | Columns, Console, Context Panel, Schema, Tables, Variables, Toolbox, Windows, Home, Reset Filter, Edit Tooltip..., Embed..., Full Screen, Presentation Mode, Layout | Save to Gallery, Layout | Open Gallery, Layout | Clone View, Layout | Download, Layout | Clear |
Select | All, None, Invert, All Columns, Duplicates..., Missing Values..., Random Rows..., Extract Selected Rows, Filter to Column..., Selection to Column..., Selection to Filter |
Data | Aggregate Rows... (also pivot), Join Tables..., Link Tables..., Compare Tables..., Compare Columns..., Append Tables..., Unpivot..., Split Column..., Split Column by RegExp..., Categorize..., Anonymize..., Batch Edit... |
ML | Analyze | PCA..., Analyze | PLS..., Analyze | ANOVA..., Analyze | Multivariate Analysis..., Cluster | DBSCAN..., Cluster | MCL..., Models | Train Model..., Models | Apply Model..., Notebooks | New Notebook..., Reduce Dimensionality..., Impute Missing Values..., Pareto Front... |
For task-specific API surface, open the matching skill before writing code:
| User intent | Skill |
|---|---|
| Find / describe / add / remove / rename columns; set semType/units/format/friendly name; color coding | datagrok-df-and-columns |
| Calculated (formula-driven) columns | datagrok-calc-column |
| Filter rows (range, categorical, contains, substructure, predicate) | datagrok-filtering |
| Select rows; current row; selection ↔ filter | datagrok-selection |
| Add / configure / find / close viewers | datagrok-viewers |
| Grid sort, visibility, widths, pins, freeze; grid-only cell tint | datagrok-grid-customization |
| Cheminformatics: SMILES/MolBlock/InChI/canonicalize | datagrok-chem-data / datagrok-chem-toolkit |
Each datagrok_exec call runs in its own scope (a fresh new Function(...) IIFE).
Calls execute sequentially, but JS variables declared in one call are NOT visible in the next.
Persists across calls:
view reference and the t DataFrame reference (column additions,
filter changes, and other mutations are visible to later calls)Does NOT persist: const/let/var bindings, helper functions, cached values.
A second call must re-derive from t.
Before consuming a query/function result, check the wrapper's return type in the apiRef:
// CORRECT — wrapper returns Promise<string>
const helm = await grok.data.query('Biologics:GetBiologicsPeptideHelmByIdentifier',
{ peptideIdentifier: 'GROKPEP-000002' });
// WRONG — assuming a DataFrame because most queries return one
const df = await grok.data.query('Biologics:GetBiologicsPeptideHelmByIdentifier', {...});
const helm = df.columns.byIndex(0).get(0);
Datagrok apps are functions with meta.role: app. Calling one via
grok.functions.call('Pkg:appName') may return a DG.ViewBase (or nothing if
the app opens its own view). A returned view is NOT yet attached to the
workspace — hand it to grok.shell.addView(). Do NOT return the view from
the code; open it.
const result = await grok.functions.call('Pkg:appName');
if (result instanceof DG.ViewBase)
grok.shell.addView(result);
const helmInput = await ui.input.helmAsync('', { editable: false });
helmInput.stringValue = helmString;
return helmInput.root;
Returned graphics elements may render blank without intrinsic dimensions. Extract Base64-encoded image data and wrap with explicit width and height:
const b64 = await grok.functions.call('Chem:ChemistryGasteigerPartialCharges', {mol: 'CCC', contours: 10});
return ui.image('data:image/png;base64,' + b64, 300, 200);
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Add support for a new curve data format in the Curves package converter system
The English summary is being prepared. Showing the original description.
Create info panels that appear in the context panel based on semantic types
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Add a new single-objective optimization algorithm to the sci-comp library. Use when the user asks to implement a new optimizer (e.g. gradient descent, BFGS, simulated annealing, differential evolution).
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Add unit tests to a Datagrok package
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Answer a "how do I …" question about the platform with a Gherkin scenario on @datagrok-libraries/bdd that is filmed into a how-to video (grok-bdd guide), so the answer is demonstrated, sent as a video plus numbered steps, and kept as a regression test; the same scenarios, filmed in help mode, are the GIFs of the help pages
The English summary is being prepared. Showing the original description.
Translate hand-written Playwright specs (or any existing UI tests) into Gherkin features on @datagrok-libraries/bdd, then prove the features test what they claim by backward-matching them against the originals with independent reviewers, and fix the gaps in the core, the library and the features
The English summary is being prepared. Showing the original description.