Find proteomics projects, which study proteins on a broad scale, in PRIDE Archive and summarize their metadata. Search by keyword or use a PXD accession to inspect a specific project's registered information.
Submit compact PRIDE Archive API requests for proteomics project discovery and project-level metadata. Use when a user wants concise PRIDE summaries
Review the instructions the agent will receive before you install.
scripts/rest_request.py for all PRIDE Archive calls.base_url=https://www.ebi.ac.uk/pride/ws/archive/v2.projects for discovery and keep page sizes modest.projects and projects/<PXD accession>.base_url, pathmethod, params, headers, json_body, form_body, record_path, response_format, max_items, max_depth, timeout_sec, save_raw, raw_output_path{"base_url":"https://www.ebi.ac.uk/pride/ws/archive/v2","path":"projects","params":{"keyword":"proteomics","pageSize":10},"max_items":10}{"base_url":"https://www.ebi.ac.uk/pride/ws/archive/v2","path":"projects/PXD001357"}ok, source, path, method, status_code, warnings, and either compact records or a compact summary.raw_output_path when save_raw=true.ok=false with error.code and error.message.echo '{"base_url":"https://www.ebi.ac.uk/pride/ws/archive/v2","path":"projects","params":{"keyword":"proteomics","pageSize":10},"max_items":10}' | python scripts/rest_request.py
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