Run the memex session-init ritual at the start of a fresh session: load the bias-log, read the persistent-self trail in order, run the verification scoreboard, and surface the next slice from the docs. Use at the very start of any session that operates on the memex repo, when reconstructing context before doing work, or when an interrupted session needs to re-orient. NOT the `memex init` CLI command (which initializes the store/db) — this is the reconstruct-context ritual.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Organize, extract, prune, and verify Claude Code persistent memory files. Covers MEMORY.md as a concise index, topic extraction to dedicated files, staleness detection, accuracy verification against project state, the dual 200-line / 25KB load cap, and reachability of topic files from the index. Use when MEMORY.md is approaching either load cap, after a session produces durable insights worth preserving, when a topic section has grown beyond 10-15 lines and should be extracted, when project state has changed and memory entries may be stale, or before and after rewriting the index so that no topic file loses its only pointer.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Create, track, switch, sync, and clean up Git branches. Covers naming conventions, safe branch switching with stash, upstream synchronization, and pruning merged branches. Use when starting work on a new feature or bug fix, switching between tasks on different branches, keeping a feature branch up to date with main, or cleaning up branches after merging pull requests.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Create, merge, and deduplicate BibTeX bibliography files using R packages (RefManageR, bibtex). Parse .bib files into structured R objects, merge multiple bibliographies with deduplication by DOI or title similarity, generate entries from DOI/ISBN/arXiv ID, and export clean sorted .bib files. Use when creating a new .bib file for an R Markdown or Quarto project, merging bibliographies from multiple collaborators, deduplicating a .bib that has grown through copy-paste accumulation, or generating BibTeX entries programmatically from DOIs or other identifiers.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Maintain the 8 essential garden hand tools through sharpening, handle care, rust prevention, and seasonal storage. Covers bypass secateurs, hori-hori, hand fork, trowel, pruning saw, sharpening stone, watering can, and soil rake. Use after each garden session for quick cleaning, monthly during the growing season for sharpening and oiling, at end of season for winter storage preparation, before spring for pre-season readiness checks, or whenever a tool feels dull, stiff, or shows rust.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Instrument applications with OpenTelemetry for distributed tracing, including auto and manual instrumentation, context propagation, sampling strategies, and integration with Jaeger or Tempo. Use when debugging latency issues in distributed systems, understanding request flow across microservices, correlating traces with logs and metrics for root cause analysis, measuring end-to-end latency, or migrating from legacy tracing systems to OpenTelemetry.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Record insect sightings with location, date, habitat, photography, behavior notes, preliminary identification, and citizen science submission. Covers GPS coordinates, weather conditions, microhabitat description, macro photography techniques, behavioral observations, preliminary identification to order using body plan, and submission to citizen science platforms such as iNaturalist. Use when encountering an insect you want to document, contributing to citizen science biodiversity databases, building a personal observation journal, or supporting ecological surveys with georeferenced photographic records.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Classify gate call variants in a minified JavaScript bundle. Covers context-window extraction around a flag occurrence, identification of 4–6 reader variants (sync boolean, sync config-object, bootstrap-aware TTL, truthy-only, async bootstrap, async bridge), default-value extraction (boolean / null / numeric / config-object literal), conjunction detection across `&&` predicates, kill-switch inversion detection, and production of a gate-mechanics record that feeds probe- feature-flag-state. Use when a flag's behavior cannot be inferred from its name alone, when the binary uses multiple reader libraries, or when config-object gates carry structured schemas distinct from boolean gates.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Implement policy-as-code enforcement using OPA Gatekeeper or Kyverno to validate and mutate Kubernetes resources according to organizational policies. Covers constraint templates, admission control, audit mode, reporting violations, and integrating with CI/CD pipelines for shift-left policy validation. Use when enforcing resource configuration standards, preventing security misconfigurations such as privileged containers, ensuring compliance before deployment, standardizing naming conventions, or auditing existing cluster resources against policies.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Develop a gas chromatography method from scratch: define analytical objectives, select column chemistry, optimize temperature programming, choose carrier gas and detector, and validate initial system performance for target analytes in a given matrix.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Apply the fail-early (fail-fast) pattern to detect and report errors at the earliest possible point. Covers input validation with guard clauses, meaningful error messages, assertion functions, and anti-patterns that silently swallow failures. Primary examples in R with general/polyglot guidance. Use when writing functions that accept external input, adding input validation before CRAN submission, refactoring code that silently produces wrong results, reviewing PRs for error-handling quality, or hardening internal APIs against invalid arguments.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Configure the putior MCP server to expose 16 workflow visualization tools to AI assistants. Covers Claude Code and Claude Desktop setup, dependency installation (mcptools, ellmer), tool verification, and optional ACP server configuration for agent-to-agent communication. Use when enabling AI assistants to annotate and visualize workflows interactively, setting up a new development environment with putior MCP integration, or configuring agent-to-agent communication via ACP for automated pipelines.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Create a GitHub release with proper tagging, release notes, and optional build artifacts. Covers semantic versioning, changelog generation, and GitHub CLI usage. Use when marking a stable version of software for distribution, publishing a new library or application version, creating release notes for stakeholders, or distributing build artifacts (binaries, tarballs).
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Coordinate safely with a peer interactive session sharing the same git worktree — check first whether a separate worktree removes the problem, then declare path and branch scope before the first edit, survive a contended index lock, and review the whole branch before opening a PR. Activate when starting work in a repository that may already be occupied, when a git command fails with `index.lock: File exists`, when `guard:snapshot` refuses because a snapshot already exists, or when a commit turns out to contain a file this session never edited. When one session leads and the other supports, divide the labour by shape and re-derive every reported number against a named revision before citing it. Distinct from subagent concurrency: a peer session cannot be bracketed, because no baseline exists from before its edits.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Configure MCP (Model Context Protocol) servers for Claude Code and Claude Desktop. Covers mcptools setup, Hugging Face integration, WSL path handling, and multi-client configuration. Use when setting up Claude Code to connect to R via mcptools, configuring Claude Desktop with MCP servers, adding Hugging Face or other remote MCP servers, or troubleshooting MCP connectivity between clients and servers.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Scaffold a new R package with complete structure including DESCRIPTION, NAMESPACE, testthat, roxygen2, renv, Git, GitHub Actions CI, and development configuration files (.Rprofile, .Renviron.example, CLAUDE.md). Follows usethis conventions and tidyverse style. Use when starting a new R package from scratch, converting loose R scripts into a structured package, or setting up a package skeleton for collaborative development.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Extract maximum value from existing code — performance optimization, API surface refinement, and dead weight elimination. The art of turning base code into gold through systematic identification and amplification of value-bearing patterns. Use when optimizing a working but sluggish codebase, refining an API surface that has accumulated cruft, reducing bundle size or memory footprint, or preparing code for open-source release — when code works correctly but doesn't shine and needs polish rather than a full rewrite.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Remove dead code, unused imports, fix lint warnings, and normalize formatting across a codebase without changing business logic or architecture. Use when lint warnings have piled up during rapid development, unused imports and variables clutter files, dead code paths were never removed, formatting is inconsistent, or static analysis tools report fixable hygiene issues.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Configure a Git repository with proper .gitignore, branch strategy, commit conventions, hooks, and remote setup. Covers initial setup and common patterns for R, Node.js, and Python projects. Use when initializing version control for a new project, adding a .gitignore for a specific language or framework, setting up branch protection and conventions, or configuring commit hooks.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Structured GitHub issue creation from review findings or task breakdowns. Groups related findings into logical issues, applies labels, and produces issues with standard templates including summary, findings, and acceptance criteria. Designed to consume output from review-codebase or similar review skills.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Containerize an R-based MCP (Model Context Protocol) server using Docker. Covers mcptools integration, port exposure, stdio vs HTTP transport, and connecting Claude Code to the containerized server. Use when deploying an R MCP server without requiring a local R installation, creating a reproducible MCP server environment, running MCP servers alongside other containerized services, or distributing an MCP server to other developers.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Deploy and configure an API gateway (Kong or Traefik) to handle API traffic management, authentication, rate limiting, request/response transformation, and routing. Covers plugin configuration, upstream services, consumer management, and integration with existing infrastructure. Use when multiple backend services need a unified API endpoint, when centralized authentication or rate limiting is required, when implementing API versioning, or when needing detailed analytics and load balancing for microservices.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Create a Work Breakdown Structure (WBS) and WBS Dictionary from project charter deliverables. Covers hierarchical decomposition, WBS coding, effort estimation, dependency identification, and critical path candidates. Use after a project charter is approved, when planning a classic or waterfall project with defined deliverables, breaking a large initiative into manageable work packages, or establishing a basis for effort estimation and resource planning.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트
Analyze an arbitrary codebase to identify functions, APIs, and data sources suitable for exposure as MCP tools, producing a tool specification document. Use when planning an MCP server for an existing project, auditing a codebase before wrapping it as an AI-accessible tool surface, comparing what a codebase can do versus what is already exposed via MCP, or generating a tool spec to hand off to scaffold-mcp-server.
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pjt222/agent-almanac☆ 422026년 10월 23일 업데이트