'dora' 검색 결과

Foodora-only CLI for checking past orders and active order status (Deliveroo WIP).

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Use for pull-request, merge, version and release mechanics in the Syntropic137 repo, and for CI or release-pipeline failures. Trigger phrases include "open a PR", "submit my changes", "address the review comments", "Copilot left comments", "merge this PR", "push this nit straight to main", "CI is red", "the release gate failed", "smoke test broke", "why is this PR BLOCKED", "bump the version", "cut a release", "release v1.x", "write the release notes", "main -> release PR", "approve the release gate", "the release published a bad asset", "triage the open PRs", "PR backlog", "which PRs are ready to merge", "merge order", "DORA metrics", "deploy frequency", "lead time", "change failure rate", "time to restore", "why didn't the issue auto-close". Covers trunk-based `main`, the `release` branch, local gates (`just qa-ci`, `just preflight`), GitHub Actions gates, review and merge policy, and post-release verification. Do NOT use for deciding what to dispatch, running the orchestrator loop, or deciding when to deploy a beta or run a pit stop (see `orchestrating`); for whether a task belongs in a workspace or locally (see `dogfooding`); for using the `syn` CLI as an end user (see the syntropic137 plugin skills).

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Decides whether and how to polish a draft genome assembly to raise consensus accuracy (QV) with read-type-matched tools - Racon and medaka (ONT consensus), dorado polish, Polypolish and pypolca (Illumina, repeat-aware), Pilon (legacy short-read), NextPolish/NextPolish2, Hapo-G (haplotype-aware), ntEdit, and DeepPolisher/PEPPER-Margin-DeepVariant for human. Covers the do-not-polish-HiFi rule, the medaka basecaller-model footgun, held-out Merqury QV as the only honest stop signal, and the haplotype-collapse trap. Use when correcting homopolymer indels or residual SNPs in a long-read assembly, deciding if a HiFi assembly needs polishing, or choosing an ONT vs hybrid vs short-read polishing chain.

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Assembles genomes de novo from noisy long reads (Oxford Nanopore R9/R10/Dorado, PacBio CLR) with Flye (repeat graph), Canu (correct-trim-assemble OLC), NextDenovo, Shasta, Raven, wtdbg2, or miniasm, and reconciles bacterial assemblies into a consensus with Trycycler/Autocycler. Covers matching the input flag to the basecaller era (--nano-hq vs --nano-raw), why a raw long-read assembly is contiguous but low-QV and not finished until polished, haplotig false-duplication and purge_dups, coverage and read-N50 as non-substitutable inputs, and mid-read adapter de-chimerization. Use when assembling a bacterial or eukaryotic genome from ONT or PacBio noisy reads, choosing a long-read assembler, or diagnosing an over-collapsed or duplicated assembly. For PacBio HiFi use hifi-assembly instead.

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Decides whether and how to polish a draft genome assembly to raise consensus accuracy (QV) with read-type-matched tools - Racon and medaka (ONT consensus), dorado polish, Polypolish and pypolca (Illumina, repeat-aware), Pilon (legacy short-read), NextPolish/NextPolish2, Hapo-G (haplotype-aware), ntEdit, and DeepPolisher/PEPPER-Margin-DeepVariant for human. Covers the do-not-polish-HiFi rule, the medaka basecaller-model footgun, held-out Merqury QV as the only honest stop signal, and the haplotype-collapse trap. Use when correcting homopolymer indels or residual SNPs in a long-read assembly, deciding if a HiFi assembly needs polishing, or choosing an ONT vs hybrid vs short-read polishing chain.

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Assembles genomes de novo from noisy long reads (Oxford Nanopore R9/R10/Dorado, PacBio CLR) with Flye (repeat graph), Canu (correct-trim-assemble OLC), NextDenovo, Shasta, Raven, wtdbg2, or miniasm, and reconciles bacterial assemblies into a consensus with Trycycler/Autocycler. Covers matching the input flag to the basecaller era (--nano-hq vs --nano-raw), why a raw long-read assembly is contiguous but low-QV and not finished until polished, haplotig false-duplication and purge_dups, coverage and read-N50 as non-substitutable inputs, and mid-read adapter de-chimerization. Use when assembling a bacterial or eukaryotic genome from ONT or PacBio noisy reads, choosing a long-read assembler, or diagnosing an over-collapsed or duplicated assembly. For PacBio HiFi use hifi-assembly instead.

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World-Class Risk Management Playbook. Use for: business continuity planning (BCP), disaster recovery (DR), scenario planning, fraud prevention & detection, reputational risk management, geopolitical risk assessment, insurance & risk transfer, crisis communication, enterprise risk management (ERM), risk registers, BIA, RTO/RPO, ISO 22301, ISO 31000, COSO ERM, NIST CSF, DORA, operational resilience, three lines of defence, risk appetite, internal controls, segregation of duties, synthetic identity fraud, deepfake fraud, AML/CFT, KYC, sanctions screening, social listening, vendor risk, geopolitical exposure mapping, parametric insurance, cyber insurance, D&O, KRIs, risk dashboards. Trigger when discussing ANY risk management, business continuity, disaster recovery, fraud prevention, reputational risk, geopolitical risk, insurance strategy, crisis management, operational resilience, or enterprise risk topic. If in doubt, use this skill.

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Reorder Foodora orders + track ETA/status with ordercli. Never confirm without explicit user approval. Triggers: order food, reorder, track ETA.

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