본문으로 건너뛰기
cccskills
무료GitHub에 공개

vasp-static

VASP single-point energy calculation. Used standalone, as a pre-step for DOS/band structure, or to evaluate energy at a fixed geometry.

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG스타 208(GitHub 208 + cccskills 0)

실행 점수 미검증

설치 방법 보기

포함된 파일(1)

  • SKILL.md5.9 KB

SKILL.md(원문)

설치하기 전에 에이전트에게 전달되는 지시 내용을 확인할 수 있습니다.

VASP Single Point Calculation

Compute the total energy (and optionally charge density, wavefunction) at a fixed geometry. No ionic relaxation.

When to Use

  1. After geometry optimization — get a precise energy at the relaxed geometry with tighter settings
  2. Before DOS calculation — generate CHGCAR with fine k-mesh for subsequent non-SCF DOS
  3. Before band structure — generate CHGCAR for non-SCF band calculation
  4. Convergence testing — test ENCUT, k-points, or other parameters at fixed geometry
  5. Energy evaluation — compare energies of different configurations without relaxing

Discussion Checkpoints

🔴 Must discuss with user:

  • Functional consistency — must match the functional used in the preceding geo_opt; mixing PBE geometry with SCAN single point introduces systematic errors

🟡 Recommend confirming:

  • LORBIT (default: 11) — needed for projected DOS; set to 11 for per-atom orbital projections, omit if only total energy is needed
  • NEDOS (default: 3001) — increase for DOS analysis to resolve fine features; 301 is sufficient for energy-only calculations
  • ISMEAR — use -5 (tetrahedron) for DOS calculations, 0 (Gaussian) for general single points, 1 (Methfessel-Paxton) for metals
  • LCHARG / LWAVE — set True if this single point feeds into a subsequent DOS or band structure calculation

🟢 Safe defaults:

  • NSW = 0 (no ionic relaxation)
  • IBRION = -1 (no ionic optimizer)
  • EDIFF = 1E-5
  • ISMEAR = 0, SIGMA = 0.05

Basic Single Point

from catgo.workflow import Workflow
from catgo.workflow.builtins import geo_opt, single_point

wf = Workflow("Single point energy")
struct = wf.add_task("structure_input", structure=structure_json)
sp = wf.add_task(single_point, structure=struct.output.structure,
                 system_name="TiO2_SP")
wf.submit()

MCP equivalent:

catgo_workflow_engine(action="create", params={"name": "Single point"})

catgo_workflow_engine(action="add_task", params={
  "workflow_id": "wf_xxx",
  "task_type": "single_point",
  "software": "vasp",
  "structure": "<json>",
  "system_name": "TiO2_SP"
})

catgo_workflow_engine(action="submit", params={"workflow_id": "wf_xxx"})

After Optimization

Chain a single point after relaxation for a more accurate energy:

opt = wf.add_task(geo_opt, structure=struct.output.structure,
                  ISIF=2, system_name="relax")
sp = wf.add_task(single_point, structure=opt.output.structure,
                 ENCUT=600,     # Higher cutoff for precise energy
                 EDIFF=1e-6,    # Tighter SCF convergence
                 system_name="SP_precise")

Pre-DOS Single Point

Generate a converged charge density with a fine k-mesh for subsequent DOS:

sp = wf.add_task(single_point, structure=opt.output.structure,
                 LCHARG=True,    # Write CHGCAR (needed for DOS)
                 LWAVE=True,     # Write WAVECAR (optional, speeds up DOS)
                 ISMEAR=-5,      # Tetrahedron method (accurate DOS)
                 NEDOS=3001,     # Dense energy grid
                 EDIFF=1e-6,     # Tight convergence
                 system_name="SP_for_DOS")

Pre-Band Structure Single Point

Generate CHGCAR for non-SCF band calculation:

sp = wf.add_task(single_point, structure=opt.output.structure,
                 LCHARG=True,    # Write CHGCAR
                 ICHARG=2,       # Self-consistent (generate charge)
                 system_name="SP_for_bands")

Convergence Testing

Test multiple ENCUT values at a fixed geometry:

wf = Workflow("ENCUT convergence")
struct = wf.add_task("structure_input", structure=structure_json)

for encut in [400, 450, 500, 550, 600]:
    wf.add_task(single_point, structure=struct.output.structure,
                ENCUT=encut, system_name=f"ENCUT={encut}")

wf.submit()

MCP equivalent:

catgo_workflow_engine(action="create", params={"name": "ENCUT convergence"})

catgo_workflow_engine(action="add_task", params={
  "workflow_id": "wf_xxx",
  "task_type": "structure_input",
  "structure": "<json>"
})

# Repeat for each ENCUT value
catgo_workflow_engine(action="add_task", params={
  "workflow_id": "wf_xxx",
  "task_type": "single_point",
  "software": "vasp",
  "structure": "{{t_001.output.structure}}",
  "ENCUT": 400,
  "system_name": "ENCUT=400"
})
# ... repeat for 450, 500, 550, 600

Key Parameters

ParameterDefaultPurpose
NSW0No ionic steps (fixed geometry)
IBRION-1No ionic optimizer
EDIFF1e-5SCF convergence (use 1e-6 for precise energy)
NEDOS3001Number of DOS points (increase for DOS calculations)
LCHARGFalseWrite CHGCAR (set True for DOS/band pre-calc)
LWAVEFalseWrite WAVECAR (set True to restart from wavefunction)
ISMEAR0Gaussian smearing (use -5 for DOS with tetrahedron)
LORBIT11Write projected DOS (DOSCAR with per-atom projections)

ISMEAR Guidance

System typeISMEARSIGMANotes
Insulator/semiconductor00.05Gaussian smearing (default)
Metal10.2Methfessel-Paxton
DOS calculation-5N/ATetrahedron with Blochl corrections
Molecule in box00.01Small sigma, Gamma-only

Rule: ISMEAR=-5 requires at least 3 k-points per direction. Do not use for Gamma-only calculations.

Output

The single_point task produces:

  • output.energy — total DFT energy in eV
  • output.structure — the (unchanged) input structure

Troubleshooting

ProblemFix
SCF not convergingTry ALGO=All, increase NELM=400, or AMIX=0.1
Negative NBANDS warningIncrease NBANDS explicitly
Memory errorReduce NCORE, or increase node count
Wrong energy for magnetic systemSet ISPIN=2, provide MAGMOM

리뷰

아직 리뷰가 없습니다. 사용해 본 소감을 남겨 주세요.

댓글

로그인 없이 쓸 수 있습니다. 사용 후기, 질문, 작동하지 않은 환경 등을 편하게 남겨 주세요.

아직 댓글이 없습니다. 첫 댓글을 남겨 보세요.

보내면 바로 공개됩니다. 이메일 주소나 전화번호 같은 개인 정보는 쓰지 마세요. URL은 2개까지입니다.

0 / 1,000자

이 양식은 reCAPTCHA로 보호되며 Google 개인정보처리방침 및 서비스 약관이 적용됩니다.

같은 저장소의 스킬

abinit

무료

Generate and manage ABINIT DFT calculations. Use when the user requests ABINIT, or needs DFPT phonons, GW calculations, or BSE optical spectra.

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG2082026년 10월 23일 업데이트

Use when the user asks to place an adsorbate molecule on a surface, find adsorption sites, or set up a surface+adsorbate model for DFT.

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG2082026년 10월 23일 업데이트

Use when the user asks for adsorption energy, binding energy, or wants to compare how strongly a molecule binds to a surface.

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG2082026년 10월 23일 업데이트

Use when the user asks to analyze computational results: Gibbs free energy, OER/HER/CO2RR overpotentials, adsorption energy, convergence tests, DOS/d-band analysis, or Bader charge analysis.

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG2082026년 10월 23일 업데이트

Use AmberTools antechamber for molecular force field parameterization. Generates GAFF/GAFF2 parameters and AM1-BCC or RESP charges for use in AMBER or LAMMPS classical MD simulations.

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG2082026년 10월 23일 업데이트

atom-ops

무료

One-shot recipes for adding, deleting, moving, and replacing individual atoms in the active CatGo viewer structure. Use whenever the user asks to "add an atom", "delete atoms", "remove this atom", "move atom N", "replace H with Li", or any single-atom edit — including "add a hydrogen on top of atom 12" / "delete atoms 5–9" / "swap the oxygen at site 3 for fluorine". Skips the discovery loop (no need to list structure tools or check adsorption sites first); goes straight to the matching `catgo_structure` action. Triggers in Chinese on 加原子, 删原子, 减原子, 移动原子, 替换原子, 增加氢, 删除氧, 把 ... 换成 ....

한국어 요약은 준비 중입니다. 원문 설명을 표시하고 있습니다.

Hello-QM/catgo-LRG2082026년 10월 23일 업데이트

Hello-QM의 스킬 모두 보기

이 스킬의 문제 신고