「indexing」の検索結果

Build and analyze pangenomes for prokaryotes (Panaroo, PPanGGOLiN, PEPPAN, GET_HOMOLOGUES, anvi'o pangenomics) and eukaryotes (Minigraph-Cactus, PGGB, vg pangenome graphs). Implement Tettelin core/accessory/cloud genome decomposition (Tettelin 2005), Heap's law open/closed pangenome modeling, gene presence/absence GWAS (Scoary, pyseer), pangenome graph variant calling (vg, PanGenie), and structural-variation graph indexing. Use when assembling species- or genus-level pan-gene catalogs, separating core from accessory/shell/cloud genes, testing gene-content associations with phenotypes, building pangenome graphs from haplotype-resolved assemblies, calling SVs from pangenome graphs, or selecting between bacterial-pangenome and eukaryotic-pangenome workflows.

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Process many sequence files in batch (count, merge, split, convert, summarize) with memory-safe streaming and on-disk indexing using Biopython, pysam, or pyfastx. Use when iterating over a directory of FASTA/FASTQ files, merging or splitting datasets, building random access across many or huge files, or automating per-file operations without exhausting RAM.

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Sort alignment files by coordinate or read name using samtools and pysam. Use when preparing BAM files for indexing, variant calling, or paired-end analysis.

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Create and use BAI/CSI indices for BAM/CRAM files using samtools and pysam. Use when enabling random access to alignment files or fetching specific genomic regions.

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Optimize AgentDB performance with quantization (4-32x memory reduction), HNSW indexing (150x faster search), caching, and batch operations. Use when optimizing memory usage, improving search speed, or scaling to millions of vectors.

日本語の概要は準備中です。原文の説明を表示しています。

Expert patterns for Algolia search implementation, indexing strategies, React InstantSearch, and relevance tuning

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Data structures and algorithms for AI agent episodic memory. Covers vector stores (HNSW, IVF, PQ), temporal indexing, knowledge graphs with triple stores, hierarchical summarization, forgetting curves, working/long-term/ procedural memory, and memory consolidation. Deep analysis of MemGPT/Letta, Zep/Graphiti, Mem0, and the Stanford generative agents memory architecture. Teaches the CS fundamentals behind how agents remember, retrieve, and forget. Activate on: "agent memory", "episodic memory", "vector search algorithm", "HNSW", "memory retrieval", "forgetting curve", "knowledge graph memory", "MemGPT", "Letta", "Zep", "Mem0", "memory consolidation", "temporal retrieval", "agent long-term memory", "memory layer". NOT for: conversation protocol design (use agent-conversation-protocols), agent infrastructure selection (use agentic-infrastructure-2026), building RAG pipelines (use ai-engineer).

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Schema design, normalization decisions, indexing strategies, and migration safety for relational databases. Use when designing tables, choosing between normalize vs denormalize, selecting index types, planning zero-downtime migrations, or setting up connection pooling. Activate on "schema design", "normalization", "denormalization", "foreign key", "index strategy", "migration", "connection pooling", "composite key", "surrogate key", "soft delete", "polymorphic association". NOT for PostgreSQL-specific query tuning or EXPLAIN analysis (use postgresql-optimization), NoSQL or document database design, or cloud database provisioning.

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Use when working with database architecture, MariaDB/MySQL tuning, indexing strategies, slow queries, or multi-connection patterns — even when the user just says 'this query is slow'.

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[Debugging] Use when analyzing or optimizing performance bottlenecks: database queries, N+1 fan-out, indexing, API latency, memory/GC, concurrency and pool saturation, algorithmic complexity (O(n²)), network/protocol round trips, frontend rendering and Core Web Vitals, caching, and distributed/resilience paths. Calibration constants and domain laws (latency ladder, Little's Law, utilization knee, CWV thresholds, symptom→cause triage) live in references/performance-knowledge.md.

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Semantic search over Qdrant Cloud collections using the Python client. Covers vector search, filtered search, prefetch+RRF fusion, group API, recommend API, discovery API, batch queries, scroll, and payload indexing. Use when building search features, adding new query types, or working with qdrant-client.

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プロジェクトの構造インデックスと依存関係トレースにより、RAG的なコンテキスト取得を実現するスキル

Expert patterns for Algolia search implementation, indexing strategies, React InstantSearch, and relevance tuning Use when: adding search to, algolia, instantsearch, search api, search functionality.

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Diagnose or enable Session Cartographer semantic search in Codex, including least-privilege localhost access to local Qdrant and the embedding server. Use when setup, Qdrant health, localhost reachability, sandbox network denial, or semantic indexing is in question.

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Audit an existing sitemap.xml / robots.txt or generate new ones following sitemaps.org protocol and Google Search Central guidance, with a growth-first default that allows every crawler including AI search and AI training bots. Use this skill whenever the user asks to "build a sitemap", "generate sitemap.xml", "audit the sitemap", "refresh sitemap", "write robots.txt", "check robots", "allow AI crawlers", "block AI crawlers", "fix crawl budget", "submit to Google", or any other discovery / indexing configuration task. Output is a valid sitemap.xml (or sitemap index) and/or robots.txt, plus a written audit when auditing.

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Use when the user asks to "check technical SEO"; audits crawlability, indexing, Core Web Vitals, robots.txt, sitemaps, canonicals, redirects, and migrations. Not for on-page tags or content — use on-page-seo-checker. 技术SEO/网站速度

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Use when the user asks to "audit on-page SEO" or "diagnose why a single page dropped"; scores titles, meta, header structure, keyword placement, links, and images with prioritized fixes. Not for E-E-A-T / publish-readiness scoring — use content-quality-auditor; not for crawl / CWV / indexing — use technical-seo-checker. 页面SEO审计/排名诊断

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Master SQL query optimization, indexing strategies, and EXPLAIN analysis to dramatically improve database performance and eliminate slow queries. Use when debugging slow queries, designing database schemas, or optimizing application performance.

日本語の概要は準備中です。原文の説明を表示しています。

Design a PostgreSQL-specific schema. Covers best-practices, data types, indexing, constraints, performance patterns, and advanced features

日本語の概要は準備中です。原文の説明を表示しています。

Azure AI Search SDK for Python. Use for vector search, hybrid search, semantic ranking, indexing, and skillsets.

日本語の概要は準備中です。原文の説明を表示しています。

Expert patterns for Algolia search implementation, indexing strategies, React InstantSearch, and relevance tuning Use when: adding search to, algolia, instantsearch, search api, search functionality.

日本語の概要は準備中です。原文の説明を表示しています。

Expert patterns for Algolia search implementation, indexing strategies, React InstantSearch, and relevance tuning

日本語の概要は準備中です。原文の説明を表示しています。

Orchestrate AI/ML pipelines for data ingestion, model training, batch inference, and RAG indexing using Prefect, Airflow, or Dagster.

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Use when working with Coveo — coveo enterprise search platform management including sources, indexes, query pipelines, machine learning models, usage analytics, and security providers. Covers indexing health, query performance, ML model status, content freshness, and license utilization.

日本語の概要は準備中です。原文の説明を表示しています。