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概要と使いどころ
Genomic data analyses requires integrated visualization of known genomic information and new experimental data. Gviz uses the biomaRt and the rtracklayer packages to perform live annotation queries to Ensembl and UCSC and translates this to
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hoodscanR is an user-friendly R package providing functions to assist cellular neighborhood analysis of any spatial transcriptomics data with single-cell resolution. All functions in the package are built based on the SpatialExperiment object, allowing integration into various spatial transcriptomics-related packages from Bioconductor. The package can result in cell-level neighborhood annotation output, along with funtions to perform neighborhood colocalization analysis and neighborhood-based ce
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Provides Bayesian PCA, Probabilistic PCA, Nipals PCA, Inverse Non-Linear PCA and the conventional SVD PCA. A cluster based method for missing value estimation is included for comparison. BPCA, PPCA and NipalsPCA may be used to perform PCA o
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The FDA Adverse Event Reporting System (FAERS) is a database used for the spontaneous reporting of adverse events and medication errors related to human drugs and therapeutic biological products. faers pacakge serves as the interface between the FAERS database and R. Furthermore, faers pacakge offers a standardized approach for performing pharmacovigilance analysis.
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Systematic 3D interaction calls and differential analysis for Hi-C and HiChIP. The HiC-DC+ (Hi-C/HiChIP direct caller plus) package enables principled statistical analysis of Hi-C and HiChIP data sets – including calling significant interactions within a single experiment and performing differential analysis between conditions given replicate experiments – to facilitate global integrative studies. HiC-DC+ estimates significant interactions in a Hi-C or HiChIP experiment directly from the raw con
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Harmonize data management of multiple experimental assays performed on an overlapping set of specimens. It provides a familiar Bioconductor user experience by extending concepts from SummarizedExperiment, supporting an open-ended mix of st
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ChIPseeker is a Bioconductor package for annotating ChIP-seq data analysis. Peak Annotation is performed by the annotatePeak function. The position and strand information of nearest genes are reported, in addition to the distance from the p
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Expert knowledge for Azure Nutanix development including decision making. Use when selecting NC2 on Azure regions, VM SKUs, and planning capacity, performance, availability, or cost, and other Azure Nutanix related development tasks. Not for Azure VMware Solution (use azure-vmware-solution), Azure Baremetal Infrastructure (use azure-baremetal-infrastructure), Azure Virtual Machines (use azure-virtual-machines), Azure Stack Edge (use azure-stack-edge).
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Expert knowledge for Azure Large Instances development including troubleshooting, limits & quotas, and integrations & coding patterns. Use when configuring Epic SKUs, sizing volume groups, tuning EHR storage, or resolving Epic–ALI connectivity/perf issues, and other Azure Large Instances related development tasks. Not for Azure Baremetal Infrastructure (use azure-baremetal-infrastructure), Azure Virtual Machines (use azure-virtual-machines), Azure Virtual Machine Scale Sets (use azure-vm-scalesets), Azure HPC Cache (use azure-hpc-cache).
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Expert knowledge for Azure Managed Lustre development including troubleshooting, best practices, decision making, architecture & design patterns, limits & quotas, security, configuration, and integrations & coding patterns. Use when mounting AML filesystems, linking Blob, using AKS CSI, setting quotas, or tuning Lustre performance, and other Azure Managed Lustre related development tasks. Not for Azure NetApp Files (use azure-netapp-files), Azure Virtual Machines (use azure-virtual-machines), Azure Virtual Network (use azure-virtual-network), Azure Virtual Network Manager (use azure-virtual-network-manager).
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Expert knowledge for Azure Blob Storage development including troubleshooting, best practices, decision making, limits & quotas, security, configuration, integrations & coding patterns, and deployment. Use when choosing Blob tiers, configuring NFS/SFTP or BlobFuse, securing with SAS/RBAC, tuning performance, or using SDK/CLI, and other Azure Blob Storage related development tasks. Not for Azure Files (use azure-files), Azure Queue Storage (use azure-queue-storage), Azure Table Storage (use azure-table-storage), Azure NetApp Files (use azure-netapp-files).
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Remove signs of AI-generated writing from text. Use when editing or reviewing text to make it sound more natural and human-written. Based on Wikipedia's comprehensive "Signs of AI writing" guide. Detects and fixes patterns including: inflated symbolism, promotional language, superficial -ing analyses, vague attributions, em dash overuse, rule of three, AI vocabulary words, negative parallelisms, and excessive conjunctive phrases.
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Improve the agent itself, or audit its recent performance - better skills, prompts, workflows, and config, plus a quality/reliability/memory-hygiene review of what it did and what failed
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Amazon Buy Box strategy and optimization framework. Eligibility factor analysis, competitive pricing strategies, FBA vs FBM impact assessment, seller performance optimization, and Buy Box winning tactics. Use when the user asks about Amazon Buy Box, winning Buy Box, Buy Box eligibility, or Buy Box optimization.
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Amazon sales volume estimator for sellers and product researchers. Estimate monthly sales and revenue from BSR (Best Seller Rank), ASIN, or keyword. Three modes: (A) BSR Calculator — input BSR + marketplace + price + category to get instant sales estimate, (B) ASIN Lookup — input ASIN to auto-fetch data and estimate sales, (C) Keyword Market Analysis — input keyword to analyze total market size and competition. Works on 12 Amazon marketplaces. No API key required. Use when: (1) estimating how many units a product sells per month, (2) sizing a market or niche opportunity, (3) analyzing competitor sales performance, (4) comparing sales across price points, (5) identifying top sellers vs long-tail distribution.
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Comprehensive Amazon advertising strategy and campaign optimization. Sponsored Products, Sponsored Brands, Sponsored Display campaign management, budget allocation, ACoS optimization, and performance tracking. Use when the user asks about Amazon PPC, advertising strategy, campaign optimization, or Amazon ads management.
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Plan shoot-ready Amazon product photography, listing image sets, infographics, lifestyle scenes, and production briefs. Use when a seller asks for an Amazon photo shot list, creative direction, image-pack plan, photography budget, DIY-versus-done-for-you decision, or handoff to a photographer or image-generation workflow. Do not use for listing copy or image-only performance auditing.
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Amazon keyword rank tracking and performance analysis. Comprehensive ranking factor analysis, change diagnosis, improvement strategy development, and competitive position monitoring. Use when the user asks about keyword rankings, position tracking, ranking changes, or competitive analysis.
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Amazon PPC campaign builder and optimizer for sellers. Two modes: (A) Build — design a complete campaign structure from scratch with keyword groupings, bid calculations, and negative keyword lists, (B) Optimize — audit existing campaigns using search term reports, identify keyword funnel opportunities, calculate bid adjustments, and generate a week-by-week action plan. Integrates with amazon-keyword-research for keyword input. No API key required. Use when: (1) setting up Amazon PPC campaigns for a new product, (2) auditing existing campaign performance and ACoS, (3) optimizing keyword bids and negative keywords, (4) building Auto/Manual/Exact campaign structures, (5) analyzing search term reports for opportunities, (6) calculating break-even ACoS and target ACoS, (7) scaling profitable campaigns to Sponsored Brands or Display.
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Amazon Sponsored Display campaign strategy and optimization. Audience targeting, retargeting campaigns, creative optimization, and performance management. Use when the user asks about Amazon display ads, audience targeting, retargeting, or Sponsored Display campaigns.
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Provides guidance for writing and benchmarking optimized CUDA kernels for NVIDIA GPUs (H100, A100, T4) targeting HuggingFace diffusers and transformers libraries. Kernels must be kernel-builder/ABI3-compliant: no pybind11, no setup.py, TORCH_LIBRARY_EXPAND bindings only. Supports models like LTX-Video, Stable Diffusion, LLaMA, Mistral, and Qwen. Includes integration with HuggingFace Kernels Hub (get_kernel) for loading pre-compiled kernels. Includes benchmarking scripts to compare kernel performance against baseline implementations.
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Provides guidance for writing, optimizing, and benchmarking C++ CPU kernels with SIMD intrinsics (AVX2/AVX512) for the Hugging Face kernels ecosystem. Includes a two-phase workflow: Phase 1 correctness (generic → AVX2) and Phase 2 performance exploration (AVX512 with branching trial loop), runtime CPU dispatch, OpenMP threading, and brgemm integration for GEMM-heavy kernels.
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Generate high-performing headline variations across different angles. Trigger on "headlines", "hooks", "ad copy", "email subject lines".
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An SEO agent skill for quick, lightweight, default single-page SEO audits. Performs basic on-page and site-level checks and outputs a structured basic SEO audit report. Use when the user asks for "SEO audit", "SEO check", "check my page SEO", "page analysis", or wants a first-pass review of a URL. If the user requests "deep audit", "full report", "technical SEO audit", or "advanced SEO", use seo-audit-full instead.
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