3,301 件 ・ 関連度順
概要と使いどころ
Analyze nonlinear dynamical systems — phase portraits, fixed points, stability analysis, bifurcation diagrams, Poincare sections, Lyapunov exponents, and chaos detection. Use for any autonomous or non-autonomous ODE system where qualitative behavior matters.
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Orchestrates an end-to-end immune-repertoire pipeline from FASTQ to clonotypes, diversity, overlap, somatic hypermutation and lineages, routing on two forks. Use when deciding bulk vs single-cell (bulk amplicon/RNA-seq -> MiXCR analyze preset -> VDJtools/immunarch depth-normalized diversity and overlap -> figures; 10x paired VDJ -> MiXCR 10x preset or Cell Ranger -> scirpy gene-expression integration, chain QC, clonotype clusters); and TCR vs BCR (TCR -> exact CDR3-nt+V/J clonotypes, VDJtools diversity is fine; BCR -> somatic hypermutation makes exact clonotypes wrong -> Immcantation distToNearest/findThreshold clonal clustering, germline reconstruction, SHM, Dowser lineages); selecting the MiXCR 4.x preset by chemistry and activating its license; downsampling to equal depth before comparing diversity or overlap; and optionally annotating antigen specificity.
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End-to-end alternative splicing analysis from FASTQ to differential splicing results for short-read bulk RNA-seq. Aligns with STAR 2-pass cohort-style, performs junction QC (RSeQC, MaxEntScan, SpliceAI), runs rMATS-turbo and leafcutter for concordant differential analysis, optionally MAJIQ V3 for complex events / heterogeneous cohorts, isoform-switching with NMD/ORF/domain consequences (IsoformSwitchAnalyzeR v2 + DRIMSeq+DEXSeq+stageR DTU), and sashimi visualizations. Use when performing comprehensive splicing analysis from raw bulk RNA-seq data; for variant-driven splice prediction see splice-variant-prediction; for rare-disease single-patient outlier detection see outlier-splicing-detection; for full-isoform PacBio/ONT analysis see long-read-splicing.
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Cell-free DNA analysis pipeline from plasma sequencing to tumor monitoring. Preprocesses cfDNA reads, analyzes fragment patterns, estimates tumor fraction from sWGS, and optionally detects mutations from targeted panels. Use when analyzing liquid biopsy samples for cancer detection or monitoring.
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Analyze metabolomics data end-to-end — metabolite identification, quantification (TIC normalization, batch correction), differential analysis, and pathway interpretation. Use for processing mass-spec metabolomics output, normalization choice, untargeted metabolomics workflows, and integrating with other omics layers.
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Designs and analyzes stable-isotope-resolved metabolomics (SIRM / isotope tracing / fluxomics) experiments that measure metabolic ACTIVITY via 13C/15N/2H tracers, distinct from steady-state pool profiling. Covers tracer choice, isotopologue vs isotopomer, mass-isotopomer distributions (MID), fractional enrichment, the mandatory natural-abundance + tracer-purity correction (IsoCor, AccuCor), and the metabolic/isotopic steady-state vs non-stationary (INST-MFA) distinction. Use when feeding a labeled tracer and interpreting labeling patterns, correcting raw isotopologue intensities, computing or plotting an MID, or deciding tracing vs abundance profiling. For absolute pool concentration and MRM mechanics see metabolomics/targeted-analysis; for constraint-based genome-scale flux (FBA, not empirical tracing) see systems-biology/flux-balance-analysis; for feature detection see metabolomics/xcms-preprocessing; for pathway enrichment that ignores the pool-vs-flux caveat see metabolomics/pathway-mapping.
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Iterative lead optimization with analyze-reason-generate-verify-evaluate loop. Paper-backed (MT-Mol, DrugR, MultiMol).
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Analyzes chemical libraries by scaffold using Bemis-Murcko scaffolds, generic frameworks, cyclic skeletons, matched molecular pair (MMP) analysis via mmpdb, R-group decomposition, Free-Wilson analysis, scaffold hopping, and chemotype-aware ML train/test splits. Use when identifying chemotype clusters in a library, deriving SAR transformation rules, decomposing series into R-groups, performing scaffold-balanced QSAR splits, or planning analog campaigns.
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Analyze Chronote product adoption with PostHog and Langfuse, including active users, meetings, feature usage, AI telemetry, and privacy-safe resolution of active Discord guild IDs to live server names.
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Analyzes current state and user query to answer BMad questions or recommend the next skill(s) to use. Use when user asks for help, bmad help, what to do next, or what to start with in BMad.
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Validate and analyze budgets for SCF Build Award submissions. Use when reviewing whether a submission's budget is proportional, justified, and well-structured based on patterns from 215 funded Build Awards.
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Analyze the competitive landscape for an SCF submission. Identifies similar projects on Stellar and other chains, assesses overlap and differentiation. Use when reviewing or drafting an SCF submission and you need to map similar projects on Stellar and other chains and articulate the differentiation.
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PM planning workflow — analyze requirements, select tech stack, decompose into prioritized tasks with dependencies, and define API contracts
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When the user wants to create, optimize, or analyze a referral program, affiliate program, or word-of-mouth strategy. Also use when the user mentions 'referral,' 'affiliate,' 'ambassador,' 'word of mouth,' 'viral loop,' 'refer a friend,' or 'partner program.' This skill covers program design, incentive structure, and growth optimization.
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Analyze build vs buy decisions for AI solutions. TRIGGERS - Use when user needs help with ai-build-vs-buy related tasks.
日本語の概要は準備中です。原文の説明を表示しています。
Analyze AI conversations. TRIGGERS - Use when user needs help with ai-conversation-analytics related tasks.
日本語の概要は準備中です。原文の説明を表示しています。
Analyze A/B test results with statistics. TRIGGERS - Use when user needs help with ab-test-analysis related tasks.
日本語の概要は準備中です。原文の説明を表示しています。
Analyze 5G use cases. TRIGGERS - Use when user needs help with 5g-use-case-analysis related tasks.
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Reads and summarises ScenarioRunner output — the criteria pass/fail tables from --output/--file, the machine-readable --json and --junit result files, and the criteria JSON written alongside a --record recording — and runs the metrics module (metrics_manager.py) to compute custom measurements over a recorded run offline, without the simulator. Use when the user asks "did the scenario pass", "why did it fail", "summarise these results", "compare these runs", or wants distance/speed/lane metrics from a recording.
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Deep, excruciating code review. Use anytime to analyze code for correctness, edge cases, security, performance, and design issues. Not tied to baseline—this is pure code analysis.
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Docker image reviews, optimization, and step-building guidance. Analyzes Dockerfiles for best practices, security issues, and anti-patterns.
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Analyze and optimize AGC (Automatic Gain Control) parameters for WaveCap-SDR channels. Use when audio is too quiet, too loud, has pumping artifacts, or when tuning AGC attack/release/target settings for FM/AM/SSB modes.
日本語の概要は準備中です。原文の説明を表示しています。
Analyze changes and create a meaningful commit with agent authorship. Internal skill for evolve_loop.
日本語の概要は準備中です。原文の説明を表示しています。
Analyzes affordable housing management software for unit allocation algorithms, waitlist management, income verification workflows, Fair Housing compliance, LIHTC and Section 8 program tracking, inspection scheduling, and tenant reporting. USE THIS SKILL WHEN: - You are reviewing housing management software or tenant management systems - Someone asks about Section 8, LIHTC, or public housing program compliance - You need to audit unit allocation algorithms for fairness or bias - A project involves waitlist management, income verification, or rent calculations - You are evaluating HUD compliance (50058, EIV, PIC submissions) - Someone mentions Fair Housing, reasonable accommodation, or protected class handling - You need to review HQS/NSPIRE inspection tracking or abatement workflows - A codebase handles tenant eligibility, subsidy calculations, or housing vouchers TRIGGER PHRASES: "affordable housing", "Section 8", "LIHTC", "public housing", "waitlist management", "income verification", "Fair Housing", "HUD compliance", "rent calculation", "housing voucher", "tenant management", "HQS inspection", "unit allocation", "housing authority"
日本語の概要は準備中です。原文の説明を表示しています。