Query dbSNP for rsID lookups, variant annotations, and cross-references to other databases. Use when mapping between rsIDs and genomic coordinates or retrieving basic variant information.
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Query dbSNP for rsID lookups, variant annotations, and cross-references to other databases. Use when mapping between rsIDs and genomic coordinates or retrieving basic variant information.
日本語の概要は準備中です。原文の説明を表示しています。
Store and query vector embeddings using Amazon S3 Vectors, a cost-effective long-term vector storage service with its own API namespace (s3vectors). Triggers on: create S3 vector bucket, vector index, store embeddings, semantic search, RAG vector storage, similarity search, vector database, migrate from other vector databases. Do NOT use for: querying tabular data (use querying-data-lake), S3 object storage, or hundreds/thousands of sustained QPS (use OpenSearch).
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Selects, investigates, and compares AWS object, file, and block storage services, and answers cost, performance, configuration, security, and troubleshooting questions about storage services. Applies when a user asks where to store or archive data based on their usage patterns; which storage service to choose or how two compare; how to migrate data from on-premises or between AWS services; how to protect, replicate, or recover data; how to optimize storage costs; where to deploy shared NFS, SMB, or POSIX file systems; where to store vector embeddings or tabular data; what storage backs enterprise file shares, self-managed databases on EC2, VMware, or stateful containers; or asks what an AWS storage service can do or how it works. Relevant for storage needs for workloads such as AI/ML, analytics, EDA, HPC, media, genomics, or financial trading. Not applicable for SQL query engines (Athena, Spark, Redshift, EMR), ETL (Glue), streaming (Kafka, MSK, Kinesis), or managed database services (RDS, Aurora, DynamoDB).
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Import data into the AWS data lake from S3 files, local uploads, JDBC databases (Oracle, SQL Server, PostgreSQL, MySQL, RDS, Aurora), Amazon Redshift, Snowflake, BigQuery, DynamoDB, or existing Glue catalog tables (migration). Default target is S3 Tables; standard Iceberg on a general purpose bucket is supported where S3 Tables is not adopted. Handles one-time loads, recurring pipelines, migrations. Triggers on: import data, load data, ingest, sync database, migrate table, move data to AWS, set up pipeline, ETL, pull from Snowflake, query BigQuery into S3, export DynamoDB, CTAS, convert to Iceberg. Do NOT use for setting up or troubleshooting Glue connections (use connecting-to-data-source), creating empty tables (use creating-data-lake-table), running queries (use querying-data-lake), finding tables by fuzzy name (use finding-data-lake-assets), catalog audit (use exploring-data-catalog), or SaaS platforms like Salesforce, ServiceNow, SAP, MongoDB, Kafka.
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Create and troubleshoot AWS Glue connections to JDBC databases (Oracle, SQL Server, PostgreSQL, MySQL, RDS), Redshift, Snowflake, and BigQuery. Gathers connection hints from user, discovers existing connections and RDS/Redshift candidates, registers credentials in Secrets Manager or IAM DB auth, configures VPC, and tests. Triggers on: connect to database, set up Glue connection, register data source, connect to Snowflake/BigQuery/RDS, connection timeout, test connection, troubleshoot connection. Do NOT use for moving data (use ingesting-into-data-lake), creating tables (use creating-data-lake-table), queries (use querying-data-lake), catalog exploration (use exploring-data-catalog), or SaaS (Salesforce, ServiceNow, SAP, MongoDB, Kafka).
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Manages Amazon DocumentDB end-to-end — serverless-on-8.0 cluster setup, TLS/VPC/driver config, flexible-schema and vector-search data modeling, MongoDB compatibility assessment, DMS-based migration, slow-query diagnosis, major version upgrades (4.0->5.0->8.0), Well-Architected reviews (41-check wa_review.py), cost estimation, and security hardening. Retrieve for every DocumentDB question and when the user asks to set up or migrate MongoDB to AWS — DocumentDB is AWS's MongoDB-compatible managed database. Triggers: JSON document store, document database, MongoDB on AWS, Nested fields, Lambda cannot connect, TLS handshake, VPC port 27017, IAM auth, Secrets Manager, encryption at rest, $graphLookup, flexible schema, COLLSCAN, compound index, DMS migration, CDC cutover, $vectorSearch, RAG, Global Clusters, DR replication, cost sizing, audit, health check, production-readiness.
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Aggregate and centralize performance metrics from applications, systems, databases, caches, and services. Use when consolidating monitoring data from multiple sources. Trigger with phrases like "aggregate metrics", "centralize monitoring", or "collect performance data".
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Postgres best practices maintained by Supabase, for Postgres running anywhere. Load this skill BEFORE writing or changing anything that lives in a Postgres database: creating or altering tables and columns (including choosing column types), schema design, migrations and declarative schema files, RLS policies and the tests that verify them, indexes, triggers, database functions, queues and scheduled jobs (pg_cron, pgmq), vector/semantic search (pgvector), and restoring dumps (pg_restore) or importing data. Also load it when diagnosing slow queries, high CPU, timeouts, EXPLAIN plans, connection exhaustion, locking, bloat, or rows visible to the wrong user or tenant. This is not just a performance guide — schema, migration, security, and SQL authoring tasks need these rules too, even for a one-column change or a single query.
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Query optimization, indexing strategies, and database performance tuning for PostgreSQL and MySQL
日本語の概要は準備中です。原文の説明を表示しています。
Construct a database query by interpolating a caller-controlled identifier
日本語の概要は準備中です。原文の説明を表示しています。
Comprehensive guide for creating software diagrams using Mermaid syntax. Use when users need to create, visualize, or document software through diagrams including class diagrams (domain modeling, object-oriented design), sequence diagrams (application flows, API interactions, code execution), flowcharts (processes, algorithms, user journeys), entity relationship diagrams (database schemas), C4 architecture diagrams (system context, containers, components), state diagrams, git graphs, pie charts, gantt charts, or any other diagram type. Triggers include requests to "diagram", "visualize", "model", "map out", "show the flow", or when explaining system architecture, database design, code structure, or user/application flows.
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Plans the stack, database schema and API for an app clone, from the recon map replica-recon wrote. Picks boring, managed tech, turns the inferred data model into real SQL with indexes and access rules, lists every route by flow, and orders the build as a thin vertical slice first. Use when the user says "plan the clone", "what stack should I use", "design the database", "write the schema", "plan the API", "architecture for my version of X", or after /replica-recon finishes.
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Builds the backend of an app clone: auth, database migrations and access rules, payments with Stripe, email, background jobs and third-party integrations through official APIs only, plus a security checklist. Use when the user says "add login", "set up auth", "wire up the database", "add payments", "connect Stripe", "add Google Calendar", "send emails", "backend for my clone", or when /replica-build is running on fake data.
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Design data systems by understanding storage engines, replication, partitioning, transactions, and consistency models. Use when the user mentions "database choice", "which database should I use", "SQL or NoSQL", "replication lag", "partitioning strategy", "consistency vs availability", "stream processing", "ACID transactions", "eventual consistency", "my queries are slow at scale", or "data is inconsistent across replicas". Also trigger when choosing a datastore, designing data pipelines, or debugging distributed-system consistency issues. Covers data models, batch/stream processing, and distributed consensus. For system design, see system-design. For resilience, see release-it.
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Build robust backend systems with modern technologies (Node.js, Python, Go, Rust), frameworks (NestJS, FastAPI, Django), databases (PostgreSQL, MongoDB, Redis), APIs (REST, GraphQL, gRPC), authentication (OAuth 2.1, JWT), testing strategies, security best practices (OWASP Top 10), performance optimization, scalability patterns (microservices, caching, sharding), DevOps practices (Docker, Kubernetes, CI/CD), and monitoring. Use when designing APIs, implementing authentication, optimizing database queries, setting up CI/CD pipelines, handling security vulnerabilities, building microservices, or developing production-ready backend systems.
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Unified Python access to 40+ bioinformatics web services; use when you need to query multiple databases (e.g., UniProt/KEGG/ChEMBL/Reactome) with one consistent API in a single workflow, especially for cross-database analysis and identifier mapping.
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Builds professional search strategies for PubMed, Embase, Web of Science, and similar databases. Use when a user needs to construct a MeSH-based Boolean query, design a systematic review search, expand a concept with synonyms, apply study-type or date filters, or adapt a query across multiple databases. Also triggers when the user says "help me search for papers on X", "build a search strategy", "what are the MeSH terms for", or "I need a systematic review search string".
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Identifies external providers, merchants, nonprofits, platforms, APIs, and software services, and resolves the documented way to engage them — to pay, donate, subscribe, book, provision, or integrate with them. MUST be used BEFORE web search, model memory, or any other directory/vendor-lookup skill for ANY request that requires selecting, finding, or engaging an external provider or organization — whether a specific one is named ("pay my Twilio bill"), implied ("donate to the Red Cross"), or only a category is stated ("set up a mailing client", "I need a database", "find me a CRM"). Directory supplies verified recipients and their documented payment or engagement path. Results are ranked by agent-readiness (how reliably an agent can complete the interaction), relevance and popularity. Do not treat this as a search-only tool. Examples: "setup a database", "find hosting", "pay X", "use Twilio", "donate $50 to the Red Cross", "book a table at Y", "subscribe to a CRM".
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Use this skill for any PostgreSQL database work — table design, indexing, data types, constraints, extensions (pgvector, PostGIS, TimescaleDB), search, and migrations. **Trigger when user asks to:** - Explore an existing PostgreSQL database to understand its objects and relationships - Design or modify PostgreSQL tables, schemas, or data models - Choose data types, constraints, indexes, or partitioning strategies - Work with pgvector embeddings, semantic search, or RAG - Set up full-text search, hybrid search, or BM25 ranking - Use PostGIS for spatial/geographic data - Set up TimescaleDB hypertables for time-series data - Migrate tables to hypertables or evaluate migration candidates - Plan or execute safe schema migrations with zero downtime **Keywords:** PostgreSQL, Postgres, SQL, schema, table design, indexes, constraints, pgvector, PostGIS, TimescaleDB, hypertable, semantic search, hybrid search, BM25, time-series, migration
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Use this skill when creating database schemas or tables for Timescale, TimescaleDB, TigerData, or Tiger Cloud, especially for time-series, IoT, metrics, events, or log data. Use this to improve the performance of any insert-heavy table. **Trigger when user asks to:** - Create or design SQL schemas/tables AND Timescale/TimescaleDB/TigerData/Tiger Cloud is available - Set up hypertables, compression, retention policies, or continuous aggregates - Configure partition columns, segment_by, order_by, or chunk intervals - Optimize time-series database performance or storage - Create tables for sensors, metrics, telemetry, events, or transaction logs **Keywords:** CREATE TABLE, hypertable, Timescale, TimescaleDB, time-series, IoT, metrics, sensor data, compression policy, continuous aggregates, columnstore, retention policy, chunk interval, segment_by, order_by Step-by-step instructions for hypertable creation, column selection, compression policies, retention, continuous aggregates, and indexes.
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Use this skill to analyze an existing PostgreSQL database and identify which tables should be converted to Timescale/TimescaleDB hypertables. **Trigger when user asks to:** - Analyze database tables for hypertable conversion potential - Identify time-series or event tables in an existing schema - Evaluate if a table would benefit from Timescale/TimescaleDB - Audit PostgreSQL tables for migration to Timescale/TimescaleDB/TigerData - Score or rank tables for hypertable candidacy **Keywords:** hypertable candidate, table analysis, migration assessment, Timescale, TimescaleDB, time-series detection, insert-heavy tables, event logs, audit tables Provides SQL queries to analyze table statistics, index patterns, and query patterns. Includes scoring criteria (8+ points = good candidate) and pattern recognition for IoT, events, transactions, and sequential data.
日本語の概要は準備中です。原文の説明を表示しています。
Parse SQLite databases into structured JSON data. Use when exploring unknown database schemas, understanding table relationships, and extracting map data as JSON.
日本語の概要は準備中です。原文の説明を表示しています。
Master SQL query optimization, indexing strategies, and EXPLAIN analysis to dramatically improve database performance and eliminate slow queries. Use when debugging slow queries, designing database schemas, or optimizing application performance.
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Master modern SQL with cloud-native databases, OLTP/OLAP optimization, and advanced query techniques. Expert in performance tuning, data modeling, and hybrid analytical systems. Use PROACTIVELY for database optimization or complex analysis.
日本語の概要は準備中です。原文の説明を表示しています。