「ker」の検索結果

Install bioinformatics tools for ENCODE data analysis. Covers CLI tools (BWA, STAR, samtools, MACS2), R/Bioconductor packages (DESeq2, Seurat, ChIPseeker), Python packages (Scanpy, deeptools), and Nextflow pipeline infrastructure. Generates conda environments, R install scripts, and Python requirements. Use when the user needs to set up a bioinformatics workstation, install tools for a specific assay, create reproducible environments, or troubleshoot dependency issues. Trigger on: install tools, set up environment, conda create, bioinformatics setup, install R packages, install Bioconductor, install pipeline tools.

日本語の概要は準備中です。原文の説明を表示しています。

Execute ENCODE ATAC-seq processing pipeline from FASTQ to peaks and signal tracks. Child of pipeline-guide. Provides stage-by-stage Nextflow execution with Docker containers and cloud deployment. Handles Tn5 transposase offset correction, mitochondrial read removal, and nucleosome-free fragment selection. Use when users need to process ATAC-seq data following ENCODE standards. Trigger on: ATAC-seq pipeline, run ATAC-seq, process ATAC-seq, chromatin accessibility, open chromatin, Tn5 shift, TSS enrichment.

日本語の概要は準備中です。原文の説明を表示しています。

Execute ENCODE ChIP-seq processing pipeline from FASTQ to peaks and signal tracks. Child of pipeline-guide. Provides stage-by-stage Nextflow execution with Docker containers and cloud deployment. Use when users need to process ChIP-seq data following ENCODE standards, run peak calling with MACS2, perform IDR analysis, or generate signal tracks. Trigger on: ChIP-seq pipeline, run ChIP-seq, process ChIP-seq, MACS2 peak calling, IDR analysis, ChIP-seq FASTQ processing.

日本語の概要は準備中です。原文の説明を表示しています。

Execute ENCODE RNA-seq pipeline from FASTQ to gene quantification and signal tracks. Child of pipeline-guide. Provides Nextflow execution with Docker and cloud deployment. Use when processing RNA-seq data with STAR alignment, RSEM/Kallisto quantification, or generating expression matrices. Trigger on: RNA-seq pipeline, gene expression, STAR alignment, RSEM quantification, transcript quantification, TPM, FPKM, RNA processing, run RNA-seq.

日本語の概要は準備中です。原文の説明を表示しています。

Execute CUT&RUN processing pipeline from FASTQ to peaks and signal tracks. Child of pipeline-guide. Provides Nextflow execution with Docker and cloud deployment. Use when processing CUT&RUN or CUT&Tag data, an alternative to ChIP-seq with lower background. Trigger on: CUT&RUN pipeline, CUT&Tag, SEACR, Henikoff, targeted chromatin, pA-MNase, process CUT&RUN.

日本語の概要は準備中です。原文の説明を表示しています。

Execute ENCODE Whole Genome Bisulfite Sequencing (WGBS) pipeline from FASTQ to methylation calls. Child of pipeline-guide. Provides Nextflow execution with Docker and cloud deployment. Use when processing WGBS/bisulfite-seq data, calling methylation levels, generating bedMethyl files. Trigger on: WGBS pipeline, bisulfite sequencing, methylation calling, DNA methylation pipeline, bismark, bwa-meth, bedMethyl.

日本語の概要は準備中です。原文の説明を表示しています。

Execute ENCODE DNase-seq pipeline from FASTQ to hotspots and footprints. Child of pipeline-guide. Provides Nextflow execution with Docker and cloud deployment. Use when processing DNase-seq data, calling DNase hypersensitive sites, performing footprinting analysis. Trigger on: DNase-seq pipeline, DNase hypersensitive, DHS, Hotspot2, footprinting, DNase I, chromatin accessibility DNase.

日本語の概要は準備中です。原文の説明を表示しています。

Scaffold or migrate a repository onto release-please. Generates release-please-config.json, .release-please-manifest.json, and a release-please.yml workflow, plus an opt-in menu of tag-keyed deploy/publish templates (Docker/ECR matrix, frontend host deploy, npm OIDC publish, GitHub Release asset, Fly.io deploy, generic). Supports monorepo (mutual exclude-paths matrix), single-package, and mixed-language (node/simple/python) repos. Use when user runs /release-please-setup, mentions "release please", "set up release please", "automate releases", "conventional-commit releases", "monorepo release automation", or "migrate to release-please".

日本語の概要は準備中です。原文の説明を表示しています。

Install Taskfile (task) and scaffold or audit Taskfile.yml configurations with ecosystem-aware templates. Auto-detects Node.js/pnpm, JVM/Gradle, Python/uv, Docker, and recommends single-file or multi-file (includes) patterns based on project complexity. Use when user runs /devtools:taskfile-setup, mentions "taskfile setup", "setup task runner", "audit taskfile", "scaffold taskfile", "add taskfile", "taskfile.yml", or "developer tasks".

日本語の概要は準備中です。原文の説明を表示しています。

Per-type rich result eligibility checker. Given a URL or page type, determine WHICH Google rich results the page is eligible for, validate existing JSON-LD against Google's required/recommended properties per type, and produce a gap report. Use when user says "rich results", "rich snippets", "eligible rich results", "structured data types", or "schema eligibility".

日本語の概要は準備中です。原文の説明を表示しています。

Comprehensive guide for building, configuring, customizing, and deploying Docsify documentation sites. Use when the user wants to (1) initialize a new Docsify site, (2) add or organize Markdown pages, sidebars, navbars, or cover pages, (3) configure `window.$docsify` options, (4) customize themes / CSS variables / fonts, (5) install built-in or third-party Docsify plugins (search, GA, emoji, zoom, copy-code, comments, pagination, tabs, etc.), (6) write a custom Docsify plugin using lifecycle hooks, (7) use Docsify Markdown helpers (callouts, link attributes, image attributes, heading IDs, task lists, embed files with `:include`), (8) deploy to GitHub Pages, GitLab Pages, Netlify, Vercel, Firebase, Docker, Nginx, etc., (9) enable PWA / offline mode, virtual routes, or Vue compatibility, or (10) upgrade a Docsify site from v4 to v5. Triggers on mentions of "docsify", "_sidebar.md", "_navbar.md", "_coverpage.md", "$docsify", or `docsify-cli`.

日本語の概要は準備中です。原文の説明を表示しています。

Use this skill any time a .pptx file is involved in any way — as input, output, or both. This includes: creating slide decks, pitch decks, or presentations; reading, parsing, or extracting text from any .pptx file (even if the extracted content will be used elsewhere, like in an email or summary); editing, modifying, or updating existing presentations; combining or splitting slide files; working with templates, layouts, speaker notes, or comments. Trigger whenever the user mentions "deck," "slides," "presentation," or references a .pptx filename, regardless of what they plan to do with the content afterward. If a .pptx file needs to be opened, created, or touched, use this skill.

日本語の概要は準備中です。原文の説明を表示しています。

Add SLSA build-provenance attestations to existing GitHub Actions workflows. Use when the user wants to add artifact attestations, build provenance, or SLSA attestations to Docker container image builds in GitHub Actions CI/CD pipelines.

日本語の概要は準備中です。原文の説明を表示しています。

FrontendHire's job-search operating system (fh) — a strict pipeline tracker, deterministic weekly metrics, and a review ritual. Runs the search as a measured system where the philosophy is law. Use for logging applications/leads/referral asks, the weekly review, status/metrics, and the onboarding interview.

日本語の概要は準備中です。原文の説明を表示しています。

Writes, debugs, and refactors JavaScript code using modern ES2023+ features, async/await patterns, ESM module systems, and Node.js APIs. Use when building vanilla JavaScript applications, implementing Promise-based async flows, optimising browser or Node.js performance, working with Web Workers or Fetch API, or reviewing .js/.mjs/.cjs files for correctness and best practices.

日本語の概要は準備中です。原文の説明を表示しています。

Read and search messages, channels, and threads in the user's Slack workspace. Use to catch up on team discussions and decisions, post channel messages, and reply to coworkers through Slack's official MCP server.

日本語の概要は準備中です。原文の説明を表示しています。

Generate spoken audio from text, single or multi-speaker, including voice notes or messages for chat, audio for artifacts, and audio from cron jobs. For podcasts, briefings, or narrated summaries, use podcast.

日本語の概要は準備中です。原文の説明を表示しています。

Read and manage software issues, tickets, projects, and planning data in Linear. Use to review sprints and cycles, identify ticket rollover and release blockers, and update issue status, assignees, priorities, and milestones through Linear's official MCP server.

日本語の概要は準備中です。原文の説明を表示しています。

Retrieve lab biomarker results and clinician notes from Function Health.

日本語の概要は準備中です。原文の説明を表示しています。

Orchestrate AI coding agents (Claude Code, Codex, OpenCode) in isolated sandboxes using the @ai-hero/sandcastle SDK. Use when the user needs to (1) run agents AFK in Docker/Podman containers, (2) build multi-agent pipelines with plan-execute-review patterns, (3) run parallel agents on separate worktrees, (4) create iterative agent loops with maxIterations, (5) extract structured output from agent runs, (6) set up sandcastle in a new or existing project, or (7) write prompt files with template args and shell expressions.

日本語の概要は準備中です。原文の説明を表示しています。

Set up and run local LLMs with Harbor. Use when the user wants to run models locally, install Harbor, start Open WebUI, llama.cpp, Ollama, vLLM, Docker Model Runner, MLX, or oMLX, pull GGUF or HuggingFace models, add SearXNG web search, Speaches TTS/STT, or Open Terminal code execution, launch Codex/Claude/Grok/OpenCode against a Harbor backend, or troubleshoot GPU, VRAM, and service startup.

日本語の概要は準備中です。原文の説明を表示しています。

Run a full pre-launch quality gate before shipping — chains product review, growth audit, UX audit, security scan, and deployment preflight into a go/no-go launch decision. Stops on critical blockers. Use before v1 launch, beta release, major version rollout, or feature launch.

日本語の概要は準備中です。原文の説明を表示しています。

Detect project stack and generate GitHub Actions CI/CD workflows — PR checks with lint/test/build/security, deploy pipelines for Vercel/AWS/GCP/Fly/Docker, dependency caching, matrix testing, preview deploys, and Dependabot config

日本語の概要は準備中です。原文の説明を表示しています。

Inventory and prioritize all technical debt in a codebase. Scans for TODO/FIXME/HACK markers and stale comments, outdated and deprecated dependencies with CVE detection, high-churn files and cyclomatic complexity hotspots, duplicated code blocks.

日本語の概要は準備中です。原文の説明を表示しています。