「dataset」の検索結果

Generates complete cross-disease shared-biomarker bioinformatics research designs from a user-provided disease pair and validation direction. Always use this skill whenever a user wants to design, plan, or build a multi-dataset study linking two related diseases through shared DEGs, enrichment, PPI hub genes, public validation, regulatory-network analysis, immune infiltration, drug-gene interaction screening, and optional qRT-PCR or cell-line validation. Covers five study patterns (shared-DEG discovery, hub-gene prioritization, regulatory-network interpretation, immune/drug follow-up, bioinformatics-plus-validation) and always outputs four workload configs (Lite / Standard / Advanced / Publication+) with recommended primary plan, step-by-step workflow, figure plan, validation strategy, minimal executable version, publication upgrade path, and a strictly verified reference literature retrieval layer with real references only.

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Generates complete NHANES-style cross-sectional epidemiology + retrospective clinical validation research designs from a user-provided disease and biomarker direction. Always use this skill whenever a user wants to design, plan, or build a population-level biomarker association study using NHANES or similar survey datasets, especially when the article logic includes disease definition, biomarker formula derivation, multivariable logistic regression, restricted cubic spline analysis, subgroup stability testing, and a secondary hospital-based retrospective validation cohort. Covers five study patterns (cross-sectional association, dose-response / RCS, subgroup-stability, NHANES + retrospective validation, preliminary screening-performance) and always outputs four workload configs (Lite / Standard / Advanced / Publication+) with recommended primary plan, step-by-step workflow, figure plan, validation strategy, minimal executable version, publication upgrade path...

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Assesses whether a medical research topic is worth starting now by separating true novelty from pseudo-novelty, auditing real feasibility under stated resource constraints, and forcing a concrete start / narrow / redesign / stop decision. Always require explicit assumptions and never fabricate references, datasets, resource availability, precedent studies, or publication claims.

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Reverse-engineers the methods section of a biomedical paper into a structured, reproducible workflow. Use this skill when a user wants to understand how a study was actually executed, extract data sources, inclusion/exclusion logic, preprocessing, analytical sequence, software/tools, validation path, and critical parameters, or build a replication checklist from a paper, abstract, DOI, PMID, title, screenshot, or partial methods text. Do not treat this as generic summarization. Focus on reconstructing the operational method pipeline, surfacing missing reproducibility details, and distinguishing explicitly reported steps from inferred or unresolved ones. Never fabricate references, methods details, identifiers, software versions, parameters, datasets, or validation steps.

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Use when building a weighted gene co-expression network from a bulk expression matrix and a sample group file, filtering variable genes by MAD, identifying co-expression modules with WGCNA, correlating modules with traits, and exporting module-level plots and gene tables. NOT for single-cell RNA-seq, differential expression testing, methylation analysis, or datasets that are too small for WGCNA after quality control.

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Explains why studies on the same biomedical topic reach different or opposing conclusions by auditing differences in population, endpoint definition, sample source, assay or platform, study design, statistical model, adjustment strategy, validation chain, and bias control. It separates true contradiction from apparent contradiction caused by framing or methods. Never fabricate references, PMIDs, DOIs, trial identifiers, dataset details, platform details, study features, or conflict explanations that are not supported by the input.

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Use when correcting batch effects in merged bulk expression matrices with sample-level batch metadata while preserving biological group structure and generating before-and-after QC plots. NOT for: single-cell integration, raw FASTQ processing, differential expression without batch labels, or datasets without biological groups.

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Use this skill for setting up vector similarity search with pgvector for AI/ML embeddings, RAG applications, or semantic search. **Trigger when user asks to:** - Store or search vector embeddings in PostgreSQL - Set up semantic search, similarity search, or nearest neighbor search - Create HNSW or IVFFlat indexes for vectors - Implement RAG (Retrieval Augmented Generation) with PostgreSQL - Optimize pgvector performance, recall, or memory usage - Use binary quantization for large vector datasets **Keywords:** pgvector, embeddings, semantic search, vector similarity, HNSW, IVFFlat, halfvec, cosine distance, nearest neighbor, RAG, LLM, AI search Covers: halfvec storage, HNSW index configuration (m, ef_construction, ef_search), quantization strategies, filtered search, bulk loading, and performance tuning.

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Search flights by origin, destination, and departure date using the bundled flights dataset. Use this skill when proposing flight options or checking whether a route/date combination exists.

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Retrieve attractions by city from the bundled dataset. Use this skill when surfacing points of interest or building sightseeing suggestions for a destination.

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Lookup accommodations by city from the bundled dataset. Use this skill when you need to recommend places to stay in a given city or filter lodging options before building an itinerary.

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SkillsBench task authoring — walk a contributor from idea to submission-ready task following CONTRIBUTING.md and the task-implementation rubric. Use when the user wants to create a new SkillsBench task, scaffold a task from an existing workflow (notebook, Excel workbook, document, dataset), convert a prompt or a benchmark item into a SkillsBench task, write skills for a task, or prepare a SkillsBench PR. Pairs with `task-review` (run that as a self-check before submitting).

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Retrieve restaurants by city from the bundled dataset. Use this skill when recommending places to eat or validating dining options for a destination.

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Optimize Python code for reduced memory usage and improved memory efficiency. Use when asked to reduce memory footprint, fix memory leaks, optimize data structures for memory, handle large datasets efficiently, or diagnose memory issues. Covers object sizing, generator patterns, efficient data structures, and memory profiling strategies.

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This skill should be considered when you need to answer reflow machine maintenance questions or provide detailed guidance based on thermocouple data, MES data or defect data and reflow technical handbooks. This skill covers how to obtain important concepts, calculations, definitions, thresholds, and others from the handbook and how to do cross validations between handbook and datasets.

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A toolkit for fuzzy string matching and data reconciliation. Useful for matching entity names (companies, people) across different datasets where spelling variations, typos, or formatting differences exist.

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Multi-hop evidence search + structured extraction over enterprise artifact datasets (docs/chats/meetings/PRs/URLs). Strong disambiguation to prevent cross-product leakage; returns JSON-ready entities plus evidence pointers.

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Use this skill when reading sensor data from CSV files, writing simulation results to CSV, processing time-series data with pandas, or handling missing values in datasets.

日本語の概要は準備中です。原文の説明を表示しています。

Train GPT-2 scale models (~124M parameters) efficiently on a single GPU. Covers GPT-124M architecture, tokenized dataset loading (e.g., HuggingFace Hub shards), modern optimizers (Muon, AdamW), mixed precision training, and training loop implementation.

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Run Chain-of-Verification (CoVe) on a draft or a block of text with factual claims. Spawns the `claim-verifier` agent in a fresh context (never a conversation fork) so it never sees the draft — then reports which claims are supported, contradicted, or unverifiable. Use when user says "verify these citations", "check the claims in X", "did I hallucinate anything", "fact-check this draft", "run CoVe on this", or after any text generation that asserts facts about papers, datasets, or numerical results. NOT for style/grammar review (use `/proofread`) or substance review (use `/review-paper`).

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Generate structured research questions, testable hypotheses, and candidate empirical strategies from a topic, phenomenon, or dataset description. Use when user says "give me research ideas on X", "brainstorm questions about Y", "what could I study with this data?", "I'm looking for a paper idea on...", "generate hypotheses for...". One-shot generation, not multi-turn. For idea-refinement use `/interview-me`.

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End-to-end R data analysis pipeline — exploration → cleaning → regression → publication-ready tables and figures. Use when user says "analyze this dataset", "run a regression on X", "explore this CSV", "full analysis workflow", "get me summary stats and a regression", or points at a `.csv`/`.rds`/`.dta` and asks for empirical results. Produces numbered R scripts in `scripts/R/` and outputs to `output/`.

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Assemble a submission-ready replication package to the AEA Data and Code Availability Standard (DCAS) / openICPSR / Social Science Reproduction Platform expectations — standard replication README, dataset manifest, computational-requirements capture, a Table/Figure → script:line map, and a confidential-data deposit plan. Use when user says "build the replication package", "prepare the openICPSR deposit", "make the AEA data and code package", "DCAS compliance", "assemble the deposit for the journal", or after a paper is accepted and the journal's data editor needs the package. NOT a numeric verifier — it calls /audit-reproducibility to confirm claims reproduce before packaging.

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Multi-agent research orchestration: split a research goal into parallel sub-goals, run each via headless `claude -p` subprocesses, aggregate results into a polished report file. Use for systematic web/document research, competitive or industry analysis, batch link/dataset processing, and long-form evidence synthesis. Triggers: "深度调研", "deep research", "wide research", "多 Agent 调研", "系统调研".

日本語の概要は準備中です。原文の説明を表示しています。