Spatially-aware quality control (QC) software for both spot-level and artifact-level QC in spot-based spatial transcripomics, such as 10x Visium. These methods calculate local (nearest-neighbors) mean and variance of standard QC metrics (library size, unique genes, and mitochondrial percentage) to identify outliers spot and large technical artifacts. Scales linearly with the number of spots and is designed to be used with 'SpatialExperiment' objects.
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bioMate-AI/biomate-bioconductor-kb☆ 7962026年6月21日 更新
AUCell allows to identify cells with active gene sets (e.g. signatures, gene modules...) in single-cell RNA-seq data. AUCell uses the "Area Under the Curve" (AUC) to calculate whether a critical subset of the input gene set is enriched with
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bioMate-AI/biomate-bioconductor-kb☆ 7962026年6月21日 更新
MetaboCoreUtils defines metabolomics-related core functionality provided as low-level functions to allow a data structure-independent usage across various R packages. This includes functions to calculate between ion (adduct) and compound ma
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bioMate-AI/biomate-bioconductor-kb☆ 7962026年6月21日 更新
The R implementation for the Grammar of Succint Lipid Nomenclature parses different short hand notation dialects for lipid names. It normalizes them to a standard name. It further provides calculated monoisotopic masses and sum formulas for each successfully parsed lipid name and supplements it with LIPID MAPS Category and Class information. Also, the structural level and further structural details about the head group, fatty acyls and functional groups are returned, where applicable.
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bioMate-AI/biomate-bioconductor-kb☆ 7962026年6月21日 更新
A first step in the data analysis of Mass Spectrometry (MS) based proteomics data is to identify peptides and proteins. With this respect the huge number of experimental mass spectra typically have to be assigned to theoretical peptides derived from a sequence database. Search engines are used for this purpose. These tools compare each of the observed spectra to all candidate theoretical spectra derived from the sequence data base and calculate a score for each comparison. The observed spectrum
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bioMate-AI/biomate-bioconductor-kb☆ 7962026年6月21日 更新
When we combine gene-editing technology and sequencing technology, we need to reconstruct a lineage tree from alleles generated and calculate the similarity between each pair of groups. FindIndel() and IndelForm() function will help you align each read to reference sequence and generate scar form strings respectively. IndelIdents() function will help you to define a scar form for each cell or read. IndelPlot() function will help you to visualize the distribution of deletion and insertion. TagPro
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bioMate-AI/biomate-bioconductor-kb☆ 7962026年6月21日 更新
Amazon deal planning and promotional strategy optimization. Lightning Deals, Best Deals, Coupons, Prime Exclusive Discounts analysis and ROI calculation. Deal eligibility assessment, timing optimization, and promotional campaign planning. Use when the user asks about Amazon deals, Lightning Deals, promotional planning, deal strategy, or Amazon promotions.
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nexscope-ai/Amazon-Skills☆ 7582026年8月26日 更新
Amazon sales volume estimator for sellers and product researchers. Estimate monthly sales and revenue from BSR (Best Seller Rank), ASIN, or keyword. Three modes: (A) BSR Calculator — input BSR + marketplace + price + category to get instant sales estimate, (B) ASIN Lookup — input ASIN to auto-fetch data and estimate sales, (C) Keyword Market Analysis — input keyword to analyze total market size and competition. Works on 12 Amazon marketplaces. No API key required. Use when: (1) estimating how many units a product sells per month, (2) sizing a market or niche opportunity, (3) analyzing competitor sales performance, (4) comparing sales across price points, (5) identifying top sellers vs long-tail distribution.
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nexscope-ai/Amazon-Skills☆ 7582026年8月26日 更新
Create lead magnets and gated content to capture email subscribers and leads. Use when asked to design checklists, templates, calculators, mini-courses, whitepapers, or other downloadable content offers. Trigger phrases: "lead magnet", "gated content", "email capture", "content offer", "free download", "checklist", "template", "whitepaper", "swipe file", "content upgrade", "opt-in offer".
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OpenClaudia/openclaudia-skills☆ 7152026年10月11日 更新
Design, plan, and analyze A/B tests with statistical rigor. Use when the user asks about A/B testing, split testing, experiment design, statistical significance, sample size calculation, test duration, multivariate testing, or conversion experiments. Trigger phrases include "A/B test", "split test", "experiment", "statistical significance", "sample size", "test duration", "which version wins", "conversion experiment", "hypothesis test", "variant testing".
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OpenClaudia/openclaudia-skills☆ 7152026年10月11日 更新
Cash vs points trip cost comparison. Factors in transfer ratios, taxes, fees, CPP valuations, and opportunity cost to recommend the best redemption strategy for flights and hotels.
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borski/travel-hacking-toolkit☆ 6932026年10月12日 更新
Ash Framework — resources, actions, policies, aggregates, calculations, AshPhoenix.Form, LiveView, migrations. Use when generating resources via mix ash.codegen, editing changes, checks, types, validations, or domain code interfaces.
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oliver-kriska/claude-elixir-phoenix☆ 5652026年10月14日 更新
add all numbers in a text file by 10 and save to a new file. Use when user mentions read a file add numbers by 10, process number file, batch calculation.
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cas-bigdatalab/piflow☆ 5412026年9月22日 更新
Minus all numbers in a text file by 5 and save to a new file. Use when user mentions read a file minus numbers by 15, process number file, batch calculation.
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cas-bigdatalab/piflow☆ 5412026年9月22日 更新
Multiply all numbers in a text file by 10 and save to a new file. Use when user mentions multiply numbers by 10, process number file, batch calculation.
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cas-bigdatalab/piflow☆ 5412026年9月22日 更新
Performs security-focused differential review of code changes (PRs, commits, diffs). Adapts analysis depth to codebase size, uses git history for context, calculates blast radius, checks test coverage, and generates comprehensive markdown reports. Automatically detects and prevents security regressions.
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waybarrios/opencode-power-pack☆ 5382026年10月12日 更新
Open, create, read, analyze, edit, or validate Excel/spreadsheet files (.xlsx, .xlsm, .csv, .tsv). Use when the user asks to create, build, modify, analyze, read, validate, or format any Excel spreadsheet, financial model, pivot table, or tabular data file. Covers: creating new xlsx from scratch, reading and analyzing existing files, editing existing xlsx with zero format loss, formula recalculation and validation, and applying professional financial formatting standards. Triggers on 'spreadsheet', 'Excel', '.xlsx', '.csv', 'pivot table', 'financial model', 'formula', or any request to produce tabular data in Excel format.
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vibeeval/vibecosystem☆ 5332026年8月9日 更新
Estimate and communicate business impact of insights. Use when sizing opportunities discovered in analysis, calculating ROI of recommended actions, or prioritizing initiatives by potential impact.
日本語の概要は準備中です。原文の説明を表示しています。
nimrodfisher/data-analytics-skills☆ 4732026年9月25日 更新
Rigorous A/B test statistical analysis. Use when analyzing experiment results, calculating statistical significance, checking for sample ratio mismatch, or validating test design before launch.
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nimrodfisher/data-analytics-skills☆ 4732026年9月25日 更新
Use when you need to review, improve, or refactor Java code for type design quality — including establishing clear type hierarchies, applying consistent naming conventions, eliminating primitive obsession with domain-specific value objects, leveraging generic type parameters, creating type-safe wrappers, designing fluent interfaces, ensuring precision-appropriate numeric types (BigDecimal for financial calculations), and improving type contrast through interfaces and method signature alignment. This should trigger for requests such as Review Java code for type design; Improve type design in Java code; Fix primitive obsession in Java code; Create value objects in Java code. Part of Plinth Toolkit
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jabrena/plinth☆ 4502026年10月13日 更新
Decision rubric for when an LM agent should write-and-run code (Program-of-Thought / code interpreter) versus reason in natural language: classify each step as deterministic- computable (emit + execute code, feed the result back) vs judgment (stay in prose). Use when designing or debugging an agent step that does arithmetic/parsing/data transforms, when prose reasoning hallucinates a computation (under-coding), or when a sandbox round- trip is wasted on a judgment task (over-coding). Search keywords: code interpreter, agent does math wrong, calculator hallucination, when to run code vs reason, program of thought, PoT, tool vs reasoning.
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agentsope/SkillAlchemy☆ 4442026年10月9日 更新
Auto-loaded context for Portfolio Buddy 2 development. Use for ANY task involving: React 19 development, TypeScript, portfolio analysis features, metrics calculations, trading strategy comparison, or working with the Portfolio Buddy 2 codebase. Contains tech stack, known issues, and architectural constraints.
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aiskillstore/marketplace☆ 4322026年10月13日 更新
Trigger for: OT project description, OTA scope, Research OT under 10 U.S.C. 4021, Prototype OT under 10 U.S.C. 4022, follow-on production scope under 10 U.S.C. 4022(f), milestone-based project scope, prototype objective, phase or go/no-go structure, BAA white-paper conversion, SOO conversion, transition planning, or scope reduction before OT cost analysis. Produce a milestone-based .docx plus a separate chat-only handoff to OT Cost Analysis. Use TRL only when the project supports it. Never place cost estimates, funding profiles, contribution calculations, prices, or skill-routing content in the document. Do NOT use for a FAR SOW/PWS, OT cost analysis, IGCE, agreement terms and conditions, or an Agreements Officer's authority, participant-status, successful-completion, or follow-on determination.
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aiskillstore/marketplace☆ 4322026年10月13日 更新
Export trade history and tax calculations in formats compatible with Koinly, CoinTracker, CoinLedger, TokenTax, and IRS Form 8949
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agiprolabs/claude-trading-skills☆ 4132026年9月3日 更新