5,752 件 ・ 関連度順
概要と使いどころ
Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.
日本語の概要は準備中です。原文の説明を表示しています。
Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.
日本語の概要は準備中です。原文の説明を表示しています。
Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.
日本語の概要は準備中です。原文の説明を表示しています。
Access COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.
日本語の概要は準備中です。原文の説明を表示しています。
Implement real-time features using Convex reactive queries that automatically update when data changes, enabling live collaboration, instant updates, and reactive UIs without manual polling. Use when building live dashboards, implementing collaborative editing, creating chat applications, showing real-time notifications, building activity feeds, implementing presence indicators, creating reactive search, or any feature requiring instant data synchronization across clients.
日本語の概要は準備中です。原文の説明を表示しています。
Summarize, organize, and normalize messy research materials into an IEEE-ready writing brief before manuscript drafting. Use when Codex needs to process a folder or collection of experiment logs, code files, AI chat exports, idea notes, literature summaries, related-work notes, copied introduction excerpts, Zotero-derived paper summaries, tables, figures, or scattered Markdown/text records and convert them into structured inputs for ieee-writing, ieee-experiment, ieee-citation, ieee-reviewer, or ieee-response.
日本語の概要は準備中です。原文の説明を表示しています。
Postgres best practices maintained by Supabase, for Postgres running anywhere. Load this skill BEFORE writing or changing anything that lives in a Postgres database: creating or altering tables and columns (including choosing column types), schema design, migrations and declarative schema files, RLS policies and the tests that verify them, indexes, triggers, database functions, queues and scheduled jobs (pg_cron, pgmq), vector/semantic search (pgvector), and restoring dumps (pg_restore) or importing data. Also load it when diagnosing slow queries, high CPU, timeouts, EXPLAIN plans, connection exhaustion, locking, bloat, or rows visible to the wrong user or tenant. This is not just a performance guide — schema, migration, security, and SQL authoring tasks need these rules too, even for a one-column change or a single query.
日本語の概要は準備中です。原文の説明を表示しています。
Research climate, sun, flood, seismic, soil, contamination, and topography for a site. Use for environmental site analysis or hazard questions tied to a location.
日本語の概要は準備中です。原文の説明を表示しています。
Research transit, walking, cycling, pedestrian infrastructure, and airport access for a site. Use for mobility, accessibility, or walkability questions tied to a location.
日本語の概要は準備中です。原文の説明を表示しています。
Research population, income, age, housing, and employment around a site. Use for census, demographic, or local-market questions tied to a location.
日本語の概要は準備中です。原文の説明を表示しています。
Enrich FF&E schedule rows with categories, colors, materials, and style tags. Use to tag, categorize, or fill those missing fields; not to research new products.
日本語の概要は準備中です。原文の説明を表示しています。
Query EBI QuickGO REST API for GO terms and protein annotations. Fetch term metadata by ID, search by keyword, walk ancestor/descendant hierarchies, download annotations filtered by taxon, evidence code, aspect. Use for GO resolution, ontology traversal, annotation retrieval before enrichment. Use gseapy-gene-enrichment for enrichment; uniprot-protein-database for proteins.
日本語の概要は準備中です。原文の説明を表示しています。
Query CELLxGENE Census (61M+ cells). Search by cell type/tissue/disease/organism; get AnnData, stream out-of-core, train PyTorch models. For your own data use scanpy; for annotated data use anndata.
日本語の概要は準備中です。原文の説明を表示しています。
ENA REST API for sequences, reads, assemblies, and annotations. Portal API search, Browser API retrieval (XML/FASTA/EMBL), file reports for FASTQ/BAM URLs, taxonomy, cross-refs. For multi-DB Python use bioservices; for NCBI-only use pubmed-database or Biopython Entrez.
日本語の概要は準備中です。原文の説明を表示しています。
NCBI GEO access via GEOparse and E-utilities. Search by keyword/organism/platform, download GSE series matrices, parse GPL annotations, extract GSM metadata, load expression matrices into pandas. For single-cell use cellxgene-census; for multi-DB access use gget-genomic-databases.
日本語の概要は準備中です。原文の説明を表示しています。
Query NCBI ClinVar via E-utilities for variant clinical significance, pathogenicity, disease associations. Search by gene/rsID/condition/review status; returns ClinSig, submitter data, conditions, HGVS. For GWAS use gwas-database; for variant consequence prediction use Ensembl VEP.
日本語の概要は準備中です。原文の説明を表示しています。
Python library for genomic interval ML. Train/apply region2vec embeddings turning BED regions into vectors, index interval datasets for ML, search embedding space with BEDSpace, and evaluate embedding quality. Use for chromatin accessibility clustering, regulatory element classification, and cross-sample region comparison.
日本語の概要は準備中です。原文の説明を表示しています。
Unified CLI/Python interface to 20+ genomic databases. Gene lookups (Ensembl search/info/seq), BLAST/BLAT, AlphaFold, Enrichr enrichment, OpenTargets disease/drug, CELLxGENE single-cell, cBioPortal/COSMIC cancer, ARCHS4 expression. Spans genomics, proteomics, disease. For batch/advanced BLAST use biopython; for multi-DB Python SDK use bioservices.
日本語の概要は準備中です。原文の説明を表示しています。
ENCODE Portal REST API for regulatory genomics: TF ChIP-seq, ATAC-seq/DNase-seq peaks, histone marks, and RNA-seq across 1000+ cell types. Search experiments by assay/biosample/target; download BED/bigWig; retrieve SCREEN cCREs by region or gene. Use to annotate variants with regulatory tracks, find open chromatin in a cell type, or fetch peak files for ChIP/ATAC analysis. For regulatory variant scoring use regulomedb-database; for GWAS associations use gwas-database.
日本語の概要は準備中です。原文の説明を表示しています。
Structured ideation methods: SCAMPER, Six Thinking Hats, Morphological Analysis, TRIZ, Biomimicry, plus more. Decision framework for picking methods by challenge type (stuck, improving, systematic exploration, contradiction). Use when generating research ideas or exploring interdisciplinary connections.
日本語の概要は準備中です。原文の説明を表示しています。
Query Reactome pathways via REST: pathway queries, entity lookup, keyword search, gene list enrichment, hierarchy, cross-refs. Content + Analysis services. Python wrapper: reactome2py. For KEGG use kegg-database; for PPIs use string-database-ppi.
日本語の概要は準備中です。原文の説明を表示しています。
Query FDA drug labels (DailyMed) via REST API. Search structured product labels (SPLs) by name, NDC, set ID, or RxCUI; get indications, dosage, warnings, adverse reactions, packaging. No auth. For adverse events use fda-database; for DDIs use ddinter-database.
日本語の概要は準備中です。原文の説明を表示しています。
Scientific presentations for conferences, seminars, thesis defenses, and grant pitches. Slide design, talk structure, timing, data viz for slides, QA. PowerPoint and LaTeX Beamer. For posters use latex-research-posters.
日本語の概要は準備中です。原文の説明を表示しています。
Query DDInter drug-drug interactions via REST API (1.7M+ interactions, 2,400+ drugs). Search by drug name/ID for severity (major/moderate/minor), mechanisms, and clinical recommendations. No auth. For FDA labeling use dailymed-database; for pharmacogenomics use clinpgx-database.
日本語の概要は準備中です。原文の説明を表示しています。