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概要と使いどころ
Query the Ensembl database to resolve gene, transcript, and protein IDs, fetch genomic or protein sequences, retrieve gene structures (exons), and get variant consequence and effect predictions (VEP). Use this skill as a primary ID translator, genomic sequence database and variant effect prediction tool.
日本語の概要は準備中です。原文の説明を表示しています。
Apply before writing logic: choosing core types and data structures, sequencing scaffold-vs-feature work, asking what concurrent actors share. Get the data structures right so downstream code becomes obvious.
日本語の概要は準備中です。原文の説明を表示しています。
Apply before writing logic: choosing core types and data structures, sequencing scaffold-vs-feature work, asking what concurrent actors share. Get the data structures right so downstream code becomes obvious.
日本語の概要は準備中です。原文の説明を表示しています。
Read, write, and manipulate medical imaging data (DICOM, NIfTI, NRRD) in MATLAB. Covers Image Processing Toolbox functions (dicomreadVolume, niftiread, dicomContours, dicomanon) and Medical Imaging Toolbox enhanced APIs (medicalVolume, medicalImage, medicalref3d, extractSlice, updateOrientation). Use when reading medical files, listing DICOM series, extracting spatial referencing, changing orientation, working with RT structures, or anonymizing DICOM data. Some features require Medical Imaging Toolbox — see skill body and references for details.
日本語の概要は準備中です。原文の説明を表示しています。
Query InterPro REST API for protein domain architecture, family classification, and member-DB integration. Search entries, retrieve a protein's domains, list family members, get taxonomic distribution, link to PDB. Unifies Pfam, PANTHER, PIRSF, PRINTS, PROSITE, SMART, CDD, NCBIfam. Use uniprot-protein-database for sequences; pdb-database for 3D structures.
日本語の概要は準備中です。原文の説明を表示しています。
Generate formal specifications (definitions, predicates, invariants, pre/post-conditions) in Isabelle/HOL or Coq from informal requirements, source code, pseudocode, or mathematical descriptions. Use when users need to: (1) Formalize algorithms or data structures, (2) Create function specifications with contracts, (3) Generate predicates and properties for verification, (4) Translate informal requirements into formal logic, (5) Specify invariants for loops or data structures, or (6) Create formal definitions for mathematical concepts. Supports both Isabelle/HOL and Coq equally.
日本語の概要は準備中です。原文の説明を表示しています。
Fetch and analyze protein structures from RCSB PDB. Use this skill when: (1) Need to download a structure by PDB ID, (2) Search for similar structures, (3) Prepare target for binder design, (4) Extract specific chains or domains, (5) Get structure metadata. For sequence lookup, use uniprot. For binder design workflow, use binder-design.
日本語の概要は準備中です。原文の説明を表示しています。
Apply before writing logic: choosing core types and data structures, sequencing scaffold-vs-feature work, asking what concurrent actors share. Get the data structures right so downstream code becomes obvious.
日本語の概要は準備中です。原文の説明を表示しています。
Attributed C-Sets as algebraic databases. Category-theoretic data structures generalizing graphs and dataframes with Gay.jl color integration.
日本語の概要は準備中です。原文の説明を表示しています。
TanStack Table best practices for building headless, type-safe data tables in React with sorting, filtering, pagination, row selection, and column management. Use when building data grids, implementing client-side or server-side table features, defining column structures, managing table state, or optimizing table rendering performance.
日本語の概要は準備中です。原文の説明を表示しています。
Use when working with Redis - in-memory database, caching, pub/sub, sessions, rate limiting, RESP3, asyncio, Redis Stack
日本語の概要は準備中です。原文の説明を表示しています。
Data structures and serialization formats for agent-to-agent communication. Covers message envelopes, structured output schemas, capability declarations, task handoff payloads, error/retry signaling, and context windows as data structures. Deep comparison of A2A protocol, MCP, OpenAI function calling, and LangChain message types. Teaches when to use rigid schemas vs free-form with validation, typed vs untyped, streaming vs batch. Activate on: "agent message format", "agent communication schema", "agent-to-agent protocol", "A2A protocol", "MCP message format", "structured output for agents", "agent interop", "interchange format", "agent serialization", "task handoff format", "capability declaration". NOT for: what agents say to each other (use agent-conversation-protocols), orchestration topology (use multi-agent-coordination), building agent infrastructure (use agentic-infrastructure-2026).
日本語の概要は準備中です。原文の説明を表示しています。
Apply before writing logic: choosing core types and data structures, sequencing scaffold-vs-feature work, asking what concurrent actors share. Get the data structures right so downstream code becomes obvious.
日本語の概要は準備中です。原文の説明を表示しています。
Use when working with Baserow — baserow open-source database platform management covering workspace organization, database and table inventory, field configuration analysis, view management, webhook monitoring, and user access auditing. Use when reviewing database structures, investigating API integration issues, monitoring webhook deliveries, or auditing workspace permissions.
日本語の概要は準備中です。原文の説明を表示しています。
Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, computing graph algorithms (shortest paths, centrality, clustering), detecting communities, generating synthetic networks, or visualizing network topologies. Applicable to social networks, biological networks, transportation systems, citation networks, and any domain involving pairwise relationships.
日本語の概要は準備中です。原文の説明を表示しています。
Biological knowledge: query curated assertions and reference databases for genes, variants, pathways, regulation, cell types, reference atlases, perturbation-derived relationships, phenotypes, therapeutic targets, drugs, interactions, annotations, signatures, compounds, and predicted structures. Use for identifiers, marker sets, gene sets, associations, ontologies, database facts, and cross-database coverage.
日本語の概要は準備中です。原文の説明を表示しています。
Complete guide for Testcontainers NoSQL integration testing. Use when containerized integration testing for MongoDB or Redis. Covers MongoDB document operations, Redis five data structures, Collection Fixture pattern. Includes BSON serialization, index performance testing, data isolation strategy, and container lifecycle management. Keywords: testcontainers mongodb, testcontainers redis, mongodb integration test, redis integration test, nosql testing, MongoDbContainer, RedisContainer, IMongoDatabase, IConnectionMultiplexer, BSON serialization, BsonDocument, document model testing, cache testing, Collection Fixture
日本語の概要は準備中です。原文の説明を表示しています。
Data structures and serialization formats for agent-to-agent communication. Covers message envelopes, structured output schemas, capability declarations, task handoff payloads, error/retry signaling, and context windows as data structures. Compares the version-pinned A2A, MCP, and JSON-RPC role boundaries covered by this bundle; OpenAI and LangChain-specific APIs require their own current sources. Teaches when to use rigid schemas versus free-form content with validation, typed versus untyped boundaries, and streaming versus batch. Activate on: "agent message format", "agent communication schema", "agent-to-agent protocol", "A2A protocol", "MCP message format", "structured output for agents", "agent interop", "interchange format", "agent serialization", "task handoff format", "capability declaration". NOT for: what agents say to each other (use agent-conversation-protocols), orchestration topology (use multi-agent-coordination), building agent infrastructure (use agentic-infrastructure-2026).
日本語の概要は準備中です。原文の説明を表示しています。
Redisを使ったキャッシュ、アクセス回数制限、複数処理の同時実行制御、メッセージ配信を設計し、キーの有効期限や接続管理も見直すスキル。
Queries 20+ bioinformatics resources through CLI/Python. Supports quick lookups of gene info, BLAST/BLAT, viral sequence downloads, PDB/mmCIF structures, G2P residue annotations, enrichment analysis, OpenTargets, COSMIC, CELLxGENE, and 8cube mouse specificity/expression data. Best for interactive exploration and simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bioservices.
日本語の概要は準備中です。原文の説明を表示しています。
Analyze and design control flows and data structures. Produces compact ASCII tree diagrams showing triggers, call chains, payload shapes, state mutations, and re-render effects. Use when user asks to diagram, trace, visualize, or design a flow or data structure.
日本語の概要は準備中です。原文の説明を表示しています。
Use when you want to search for or download experimentally-determined 3D structures for biomolecules (proteins, nucleic acids, bound ligands). Supports searching by sequence similarity, structure similarity, chemical and other attributes. Also use to get metadata about biomolecular structure experiments.
日本語の概要は準備中です。原文の説明を表示しています。
Access AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.
日本語の概要は準備中です。原文の説明を表示しています。
Use when building and refining exhibits for an Administrative Science Quarterly (ASQ) manuscript — qualitative data structures and data-to-theory tables, process models, and quantitative tables. Designs exhibits; it does not run the analysis behind them.
日本語の概要は準備中です。原文の説明を表示しています。