「duplicates」の検索結果

Add a source file to the processing queue. Checks for duplicates, creates archive folder, moves source from inbox, creates extract task, and updates queue. Triggers on "/seed", "/seed [file]", "queue this for processing".

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Extract, process, and deduplicate reads using Unique Molecular Identifiers (UMIs) with umi_tools. Use when library prep includes UMIs and accurate molecule counting is needed, such as in single-cell RNA-seq, low-input RNA-seq, or targeted sequencing to distinguish PCR from biological duplicates.

日本語の概要は準備中です。原文の説明を表示しています。

Process Hi-C read pairs using pairtools. Parse alignments, filter duplicates, classify pairs, and generate contact statistics from Hi-C sequencing data. Use when processing raw Hi-C read pairs.

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Audit a local or remote tabular file (CSV/TSV) for common data quality issues — schema, nulls, types, duplicates. Read-only. Use when a dataset needs a quality check before publishing, or a showcase renders wrong (blank cells, garbled numbers, an unsortable date column) and the cause needs isolating.

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Intelligently organizes your files and folders across your computer by understanding context, finding duplicates, suggesting better structures, and automating cleanup tasks. Reduces cognitive load and keeps your digital workspace tidy without manual effort.

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Intelligently organizes your files and folders across your computer by understanding context, finding duplicates, suggesting better structures, and automating cleanup tasks. Reduces cognitive load and keeps your digital workspace tidy without manual effort.

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Keeps a project's to-do list and memory in GitHub issues — files each finding (from a review, an audit, or the user) as its own issue without duplicates, lists the open issues that bear on the current work, and closes an issue with a comment recording what was wrong, what was tried, what worked, and how it was fixed. Use when review findings or a list of problems should become tracked work (a paper's misleading claims, a codebase's bugs, improvements for later), when starting or resuming work and deciding what to do next, or when a fix has landed and its issue should be closed with a record. Needs the GitHub CLI; warns before posting to a public repository.

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Classify and resolve conflicts detected during bundle ingest (structural duplicates, definitional contradictions, near-duplicate clusters, re-ingest changes, evictions).

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Gate a prompt universe for schema and provenance completeness, target or campaign contamination, evidence entailment, naturalness, one-concept clarity, architecture consistency, aided status, answer leakage, and semantic duplicates. Use after realistic prompt generation and before human panel selection.

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Consolidate freshness-gated newsjack signals and route them by client standing before angle generation. Collapses any remaining same-story duplicates, decides strong/partial/none standing with a journalist-shape sanity check, and sorts each story into pitch_ready, big_story (always-surfaced suggestion), or watch. Never writes angles or pitches, and never drops a fresh big story.

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Diagnoses and repairs repository setup and guarded Git workflows for Claude Code or Codex — environment repair, startup sync, hook auditing, collaborator handoff. Use when a repo won't run, a teammate onboards, hook output duplicates, or commit/push/conflict needs guarding. Not for lost-commit recovery (use git-safety-net), GitHub ops (use github-ops), or history scrubbing (use github-sensitive-data-cleanup).

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Qualifies inbound leads against full ICP criteria — company size, industry, use case fit, role/seniority of the person. Checks CRM and existing customer base for duplicates and existing relationships. Outputs a scored CSV with qualification status, reasoning, and pipeline overlap flags. Tool-agnostic — works with any CRM, enrichment tool, or data source.

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Two-phase Apollo.io prospecting: free People Search to discover ICP-matching leads, then selective enrichment to reveal emails/phones (credits per contact). Creates Apollo lists. Deduplicates against existing contacts by LinkedIn URL.

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Turns Hi-C/Micro-C FASTQ into a deduplicated, filtered .pairs file with pairtools and decides whether the library worked. Covers the bwa mem -SP5M / bwa-mem2 / chromap --preset hic alignment idiom (mates mapped as independent single-end reads), pairtools parse vs parse2 and the walks-policy choice (5unique pairwise vs all for Pore-C/Micro-C concatemers), pair-type classification (keep UU and rescued UC), dedup (PCR vs optical/by-tile), select by pair_type/MAPQ/distance, restriction-fragment handling (restrict, Arima dual-enzyme, Micro-C/DNase fragment-free), and allele-specific phasing (pairtools phase to two coolers). The library-QC decision uses % long-range cis as the one-number quality metric, trans as the noise floor, orientation balance as fragment-map-free dangling-end/self-circle QC, and % duplicates as a complexity proxy. Use when processing Hi-C/Micro-C/Omni-C reads into pairs, judging library quality, handling multi-enzyme or restriction-agnostic protocols, or generating allele-specific contacts.

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Computes and interprets sequencing read depth and coverage over a genome, windows, or target regions with mosdepth (windowed depth, cumulative distribution, --quantize callable BEDs), bedtools genomecov/coverage (bedGraph tracks, per-target stats), samtools depth/coverage (per-base depth, per-contig depth+breadth). Covers the breadth-vs-mean distinction, the cumulative-coverage curve, evenness (CV/Fano/fold-80/Gini), what each tool silently counts (duplicates, secondary/supplementary, MAPQ, read span vs fragment, mate-overlap), the samtools-depth 8000-cap version trap, and the bedtools coverage -a/-b orientation flip. Use when assessing sequencing adequacy, building coverage tracks, computing breadth at a depth threshold, defining callable regions, or QCing target-capture uniformity.

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Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.

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Merge two pages that describe the same thing, preserving every distinct claim, redirecting inbound links, and recording the merge. Use this skill when the user approves a duplicate merge, says "these are the same page", "merge X into Y", or asks to clean up near-duplicates that a lint run proposed. Do NOT use to merge pages on your own judgement, to delete a page outright, or to split one page into several.

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When the user wants to configure canonical URLs, fix duplicate content, or consolidate URL signals. Also use when the user mentions "canonical," "canonical URL," "duplicate content," "duplicate content fix," "preferred URL," or "URL consolidation." For GSC duplicates, use google-search-console.

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Categorize invoices and receipts by vendor, expense, and tax bucket, detect duplicates, and produce a tax-ready monthly summary. Use during bookkeeping, tax prep, or expense reimbursement.

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Use when wrapping up a session before ending. 4 parallel subagents detect doc updates, repeated patterns, learning points, and follow-ups, then a verifier deduplicates and presents choices. Triggers on /session-wrap, session wrap, session cleanup, end of session.

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Analyze session work and automatically convert reusable patterns into Claude Code skills. Use when: "세션을 스킬로", "스킬 만들어", "이거 스킬로", "skill factory", "이 작업 자동화해", "스킬 추출", "make this a skill", "extract skill", "convert to skill", "스킬 팩토리", "자동 스킬 생성". Differs from skill-creator (archived) and manage-skills (drift detection): this skill actively analyzes sessions, checks for duplicates, and creates skills via Agent Teams.

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doubletrouble aims to identify duplicated genes from whole-genome protein sequences and classify them based on their modes of duplication. The duplication modes are i. segmental duplication (SD); ii. tandem duplication (TD); iii. proximal duplication (PD); iv. transposed duplication (TRD) and; v. dispersed duplication (DD). Transposon-derived duplicates (TRD) can be further subdivided into rTRD (retrotransposon-derived duplication) and dTRD (DNA transposon-derived duplication). If users want a s

日本語の概要は準備中です。原文の説明を表示しています。

Intelligently organizes your files and folders across your computer by understanding context, finding duplicates, suggesting better structures, and automating cleanup tasks. Reduces cognitive load and keeps your digital workspace tidy without manual effort.

日本語の概要は準備中です。原文の説明を表示しています。

Use when an idea, task, or issue surfaces mid-session and the user wants it captured as a todo instead of doing it now. Infers the area, checks duplicates, and writes the todo file plus a STATE.md update.

日本語の概要は準備中です。原文の説明を表示しています。