「boundaries」の検索結果

Delimits putative species boundaries from molecular data within the de Queiroz 2007 unified-lineage framework using ASAP (Puillandre 2021 successor to ABGD), mPTP C++ (Kapli 2017 successor to bPTP; bPTP is Python NOT R), GMYC single/multi-threshold (Pons 2006; Fujisawa 2013), multilocus BPP v4 with prior calibration from data (NOT defaults; Yang 2015), SNAPP + BFD* for SNP delimitation, DELINEATE (Sukumaran 2021) speciation-process modeling to address Sukumaran & Knowles 2017 PNAS critique that MSC delimits structure not species, integrative-taxonomy congruence (Padial 2010; Carstens 2013), Dsuite for introgression testing before sister claims (Malinsky 2021), and Meyer & Paulay 2005 barcoding-gap-absence caveat. Use when delineating species from DNA barcoding data, resolving cryptic complexes, choosing among ASAP/mPTP/BPP/DELINEATE, calibrating BPP priors, distinguishing introgression from ILS, or applying the Sukumaran-Knowles oversplitting correction.

日本語の概要は準備中です。原文の説明を表示しています。

Plot per-gene mutation distributions on a protein-domain map (lollipop / needle plots) showing mutation position, recurrence count, and variant classification with maftools, g3-lollipop, trackViewer, and ProteinPaint. Use when visualizing recurrent mutation hotspots on a single gene's protein, marking domain boundaries from UniProt/Pfam, comparing missense vs truncating distributions, or contrasting two cohorts on the same lollipop.

日本語の概要は準備中です。原文の説明を表示しています。

Provides and generates complete CRUD workflows for Spring Boot 3 services. Creates feature-focused architecture with Spring Data JPA aggregates, repositories, DTOs, controllers, and REST APIs. Validates domain invariants and transaction boundaries. Use when modeling Java backend services, REST API endpoints, database operations, web service patterns, or JPA entities for Spring Boot applications.

日本語の概要は準備中です。原文の説明を表示しています。

Refactor Spring Boot and Java code to improve maintainability, readability, and adherence to enterprise best practices. This skill transforms messy Spring Boot applications into clean, well-structured solutions following SOLID principles and Spring Boot 3.x conventions. It addresses fat controllers, improper transaction boundaries, field injection anti-patterns, and scattered configuration. Leverages Java 21+ features including record patterns, pattern matching for switch, virtual threads, and sequenced collections.

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Use when generating or modifying any Spring Boot class — controllers, services, repositories, DTOs, mappers, or configuration. Enforces strict layer separation and prevents business logic from leaking across boundaries.

日本語の概要は準備中です。原文の説明を表示しています。

X-ray any AI model's behavioral patterns — refusal boundaries, hallucination tendencies, reasoning style, formatting defaults. No API key needed.

日本語の概要は準備中です。原文の説明を表示しています。

Review a task implementation against approved specs, task boundaries, and verification evidence. Use after an implementer finishes a task, after remediation, or before accepting a task as complete.

日本語の概要は準備中です。原文の説明を表示しています。

Produce a deterministic, read-only evidence map of the repository for SDD Composy (languages, manifests, commands, modules, boundaries, staleness) and publish the context bundle only on request. Use before a PRD or TechSpec, or when the map is stale — 'mapear o repositório', 'atualizar o contexto do código', 'what does this codebase look like for SDD'. Do NOT use for architecture decisions, code review, or repository exploration without an SDD workspace.

日本語の概要は準備中です。原文の説明を表示しています。

Design an approval-gated feature specification from approved requirements. Use when PWDEV Flow discovery is complete and the user needs architecture decisions, component boundaries, quality constraints, and a definition of done.

日本語の概要は準備中です。原文の説明を表示しています。

Build modern Next.js 13+ applications using App Router architecture with Server Components, Client Components, and advanced routing patterns. Use when implementing server-first rendering, creating nested layouts, building parallel routes, implementing intercepting routes, using React Server Components, optimizing data fetching with server-side async components, implementing streaming with Suspense, managing client-side interactivity boundaries, or leveraging Next.js 13+ app directory features for performant, SEO-friendly React applications.

日本語の概要は準備中です。原文の説明を表示しています。

Three-axis orchestrator: (1) clean section boundaries — naming, routes, views, ViewModels, DB ownership, cross-section access; (2) internal cohesion — no EF in service layer, caching in service only, proper interfaces, reusable ViewComponents, architecture-test coverage; (3) focused tests — grouped under the section, covering invariants/negatives/triggers, pruned of redundancy. Push-and-bot-review loop. Use when a sizable PR landed, a section shows arch drift, or /pr-review returned a non-trivial violation list. Camps is the gold-standard reference.

日本語の概要は準備中です。原文の説明を表示しています。

Identify section boundaries and content sequences within a scraped webpage for AEM Edge Delivery Services import. Performs two-level analysis (sections, then sequences per section) and surveys available blocks.

日本語の概要は準備中です。原文の説明を表示しています。

Turborepo monorepo build system guidance. Triggers on: turbo.json, task pipelines, dependsOn, caching, remote cache, the "turbo" CLI, --filter, --affected, CI optimization, environment variables, internal packages, monorepo structure/best practices, and boundaries. Use when user: configures tasks/workflows/pipelines, creates packages, sets up monorepo, shares code between apps, runs changed/affected packages, debugs cache, or has apps/packages directories.

日本語の概要は準備中です。原文の説明を表示しています。

Review trust boundaries, input validation, permissions, abuse resistance, secrets, and safe failure behavior.

日本語の概要は準備中です。原文の説明を表示しています。

Place contracts and behavior across authority, prediction, presentation, localization, and assembly boundaries.

日本語の概要は準備中です。原文の説明を表示しています。

Resolve localized text at presentation boundaries using English-source keys, with Russian localization only when requested, and correct lifecycle refresh.

日本語の概要は準備中です。原文の説明を表示しています。

Prove repository ownership, module ownership, assembly boundaries, edit-marker rules, extension points, and test placement.

日本語の概要は準備中です。原文の説明を表示しています。

Harden an application against common security risks — validate inputs at boundaries, least-privilege access, safe secrets handling, dependency hygiene, and secure defaults. Load when shipping user-facing code, adding auth/session flows, handling untrusted data, exposing APIs, or the user asks for "security hardening", "OWASP hardening", "secure this feature". Not for skill-library security gates (use secure-skill family).

日本語の概要は準備中です。原文の説明を表示しています。

Design stable APIs and module boundaries — contract-first types, consistent errors, boundary validation, additive changes. Load when designing REST or GraphQL endpoints, public module interfaces, component props, or FE/BE contracts. Also triggers on "API design", "interface design", "design the API", "module boundary", "API contract", "define the interface". Complements feature-spec (product layer). Routes breaking retirement to api-deprecation-and-migration when it exists.

日本語の概要は準備中です。原文の説明を表示しています。

Build the smallest, highest-signal context package for an AI coding task — goal, constraints, repo facts, boundaries, and a verification plan. Load when prompts are underspecified, the agent is missing key files or decisions, the user says "use the right context", "here's the repo", or when work is drifting due to missing constraints. Also triggers on "context engineering", "gather context", "what do you need from me", "before you start". Not for cross-session continuity (use memory-startup/memory-recall).

日本語の概要は準備中です。原文の説明を表示しています。

X-ray any AI model's behavioral patterns — refusal boundaries, hallucination tendencies, reasoning style, formatting defaults. No API key needed.

日本語の概要は準備中です。原文の説明を表示しています。

Expert C4 Component-level documentation specialist. Synthesizes C4 Code-level documentation into Component-level architecture, defining component boundaries, interfaces, and relationships.

日本語の概要は準備中です。原文の説明を表示しています。

Renders Hi-C contact matrices honestly and reproducibly with matplotlib, cooltools, HiCExplorer, pyGenomeTracks, FAN-C, CoolBox, and plotgardener. Covers the raw/ICE-balanced/observed-over-expected transform choice, LogNorm vs symmetric-diverging colormaps with vmax/percentile clipping, resolution-to-feature matching (compartments 100-500kb, TADs 10-40kb, loops 5-10kb), square vs rotated-triangle track-stacking, NaN/white-stripe handling, virtual 4C, APA/saddle/on-diagonal pileups, two-condition side-by-side and log2-ratio maps, and interactive (HiGlass) vs scripted-static publication figures. Use when plotting a contact matrix, choosing a normalization or color scale, building a multi-track Hi-C figure, making a virtual 4C profile, piling up loops/boundaries, or comparing two conditions.

日本語の概要は準備中です。原文の説明を表示しています。

Delimits putative species boundaries from molecular data within the de Queiroz 2007 unified-lineage framework using ASAP (Puillandre 2021 successor to ABGD), mPTP C++ (Kapli 2017 successor to bPTP; bPTP is Python NOT R), GMYC single/multi-threshold (Pons 2006; Fujisawa 2013), multilocus BPP v4 with prior calibration from data (NOT defaults; Yang 2015), SNAPP + BFD* for SNP delimitation, DELINEATE (Sukumaran 2021) speciation-process modeling to address Sukumaran & Knowles 2017 PNAS critique that MSC delimits structure not species, integrative-taxonomy congruence (Padial 2010; Carstens 2013), Dsuite for introgression testing before sister claims (Malinsky 2021), and Meyer & Paulay 2005 barcoding-gap-absence caveat. Use when delineating species from DNA barcoding data, resolving cryptic complexes, choosing among ASAP/mPTP/BPP/DELINEATE, calibrating BPP priors, distinguishing introgression from ILS, or applying the Sukumaran-Knowles oversplitting correction.

日本語の概要は準備中です。原文の説明を表示しています。