「processing」の検索結果

Aligns and QCs methylated-RNA-immunoprecipitation (MeRIP / m6A-seq) IP and input libraries using STAR or HISAT2 splice-aware mapping, samtools sort/index, IP/input matched-pair tracking, antibody-lot metadata recording, replicate concordance via deepTools multiBamSummary + plotCorrelation, IP enrichment QC via plotFingerprint and per-transcript IP/input ratio distributions, library-complexity saturation curves via PreSeq, and the explicit do-NOT-deduplicate convention for standard non-UMI MeRIP. Use when preparing paired IP and input BAM files for exomePeak2 / MeTPeak / MACS3 peak calling, evaluating MeRIP replicate concordance and IP enrichment, deciding whether to deduplicate (standard MeRIP typically NOT), choosing genome-vs-transcriptome alignment for downstream peak vs m6Anet workflows, recording antibody clone and lot metadata for cross-batch reconciliation, detecting failed IPs via saturation curves and IP/input distribution shape, or generating IP-over-Input bigWig tracks for visualisation.

日本語の概要は準備中です。原文の説明を表示しています。

Reads, inspects, and writes Flow Cytometry Standard (FCS) files from conventional, spectral, and mass cytometry (CyTOF), and parses FlowJo/Cytobank/Diva workspaces. Covers FCS 2.0/3.0/3.1/3.2 internals ($PnE linear-vs-log, $DATATYPE, $SPILLOVER vs SPILL vs $COMP, $TIMESTEP), channel/parameter metadata, the silent linearize/truncate defaults, and R (flowCore, flowWorkspace, CytoML) plus Python (FlowKit, readfcs) readers. Use when loading flow or mass cytometry data, mapping detector channels to antibodies, extracting the event matrix, choosing a reader, or bridging FCS to the scanpy/AnnData ecosystem before preprocessing.

日本語の概要は準備中です。原文の説明を表示しています。

Processes eDNA metabarcoding from raw paired-end reads to species tables, navigating ASV (DADA2, UNOISE3) vs OTU (swarm v2) decision (Callahan 2017 vs Schloss multi-copy-16S critique), marker/primer choice (Leray COI, MiFish 12S, 515F/806R 16S, ITS2) with primer-specific bias, OBITools3 v3 command-name break (obi stats plural; .tar.gz taxonomy), tag-jumping with dual-indexing (Schnell 2015; NovaSeq 10x MiSeq), decontam as screening-not-classifier (Davis 2018), read-counts-not-abundance critique (Lamb 2019), site-occupancy modeling (Ficetola 2015), Naive-Bayes calibration limits (Bokulich 2018), and eDNA decay (Strickler 2015). Use when going from raw eDNA FASTQ to species tables, picking marker + denoising pipeline, deciding whether read counts represent abundance, applying occupancy modeling, configuring OBITools3 v3, or interpreting decontam output. Not for clinical 16S microbiome (see microbiome/amplicon-processing).

日本語の概要は準備中です。原文の説明を表示しています。

Preprocess CLIP-seq reads (eCLIP, iCLIP, iCLIP2, iCLIP3, irCLIP, PAR-CLIP, FLASH) with protocol-specific UMI extraction, adapter trimming, length filtering, and post-alignment PCR-duplicate collapse. Use when raw CLIP FASTQ must be turned into deduplicated, crosslink-preserving BAM input for peak calling; choosing between two-pass and single-pass adapter trimming; deciding minimum read length; or mapping UMI patterns to specific eCLIP/iCLIP/iCLIP2/iCLIP3 library preps.

日本語の概要は準備中です。原文の説明を表示しています。

Identify direct miRNA-target interactions from AGO HITS-CLIP, AGO-CLEAR-CLIP (chimeric reads), HEAP (Halo-Ago2 mouse), chimeric eCLIP / miR-eCLIP (deep miRNA-target profiling), or CLASH using chimeric-read processing pipelines, seed-pairing analysis, and 3' auxiliary pairing rules. Use when distinguishing direct miRNA targets from indirect, integrating CLIP-derived target maps with TargetScan / miRDB / DIANA predictions, applying canonical 7mer-8mer seed matching with 3' UTR context, or recovering miRNA-mRNA chimeras at scale.

日本語の概要は準備中です。原文の説明を表示しています。

Process many sequence files in batch (count, merge, split, convert, summarize) with memory-safe streaming and on-disk indexing using Biopython, pysam, or pyfastx. Use when iterating over a directory of FASTA/FASTQ files, merging or splitting datasets, building random access across many or huge files, or automating per-file operations without exhausting RAM.

日本語の概要は準備中です。原文の説明を表示しています。

AWS serverless and event-driven architecture expert based on Well-Architected Framework. Use when building serverless APIs, Lambda functions, REST APIs, microservices, or async workflows. Covers Lambda with TypeScript/Python, API Gateway (REST/HTTP), DynamoDB, Step Functions, EventBridge, SQS, SNS, and serverless patterns. Essential when user mentions serverless, Lambda, API Gateway, event-driven, async processing, queues, pub/sub, or wants to build scalable serverless applications with AWS best practices.

日本語の概要は準備中です。原文の説明を表示しています。

Trim PCR primers from aligned reads in amplicon-panel BAMs using samtools ampliconclip. Use when processing SARS-CoV-2 ARTIC, hereditary cancer panels, ctDNA hot-spot panels, or any amplicon assay where primer-derived bases would falsely confirm reference at primer footprints.

日本語の概要は準備中です。原文の説明を表示しています。

Process and generate multimedia content using Google Gemini API. Capabilities include analyze audio files (transcription with timestamps, summarization, speech understanding, music/sound analysis up to 9.5 hours), understand images (captioning, object detection, OCR, visual Q&A, segmentation), process videos (scene detection, Q&A, temporal analysis, YouTube URLs, up to 6 hours), extract from documents (PDF tables, forms, charts, diagrams, multi-page), generate images (text-to-image, editing, composition, refinement). Use when working with audio/video files, analyzing images or screenshots, processing PDF documents, extracting structured data from media, creating images from text prompts, or implementing multimodal AI features. Supports multiple models (Gemini 2.5/2.0) with context windows up to 2M tokens.

日本語の概要は準備中です。原文の説明を表示しています。

An infographic skill for AI agents — works inside Claude Code, Codex, Hermes, OpenClaw, Cursor, and any agent host that loads skills. Create professional infographics as self-contained HTML files with PNG exports. Use when the user asks to create, design, generate, build, or make an infographic, data visualization, visual explainer, chart poster, cheatsheet, or pocket guide. Trigger phrases include "make this visual", "turn this into a graphic", "visualize this data", "infographic for X", "cheatsheet for X", or when the user provides structured data (tokenomics allocations, ecosystem/partner lists, timelines, comparisons, step-by-step processes) AND asks for a visual output. Covers tokenomics, ecosystem overviews, game overviews, cheatsheets, airdrop guides, comparisons, and process flows. Do NOT trigger for plain text answers, markdown tables, bulleted summaries, questions asking for advice or explanations about a topic (even when the topic is tokenomics, ecosystem, vesting, etc.), inline chat diagrams, or data processing with no visual output requested. The signal is "asks for a visual", not "mentions a keyword".

日本語の概要は準備中です。原文の説明を表示しています。

Azure AI Text Analytics SDK for sentiment analysis, entity recognition, key phrases, language detection, PII, and healthcare NLP. Use for natural language processing on text.

日本語の概要は準備中です。原文の説明を表示しています。

Build or modify backend APIs, services, jobs, persistence, and integrations while preserving contracts, authorization, data integrity, and failure behavior. Use for server-side features, database changes, background processing, backend defects, and service refactors; do not use for frontend-only or infrastructure-only work.

日本語の概要は準備中です。原文の説明を表示しています。

Setup and optimize cryptocurrency mining operations — AI-powered mining (soul.md protocol), parallel agent deployment, accumulation strategies, and performance optimization.

日本語の概要は準備中です。原文の説明を表示しています。

Use when performing video/audio processing tasks.

日本語の概要は準備中です。原文の説明を表示しています。

Expert-level database systems theory covering relational model, query processing and optimization, transaction management, concurrency control, recovery, and NoSQL systems.

日本語の概要は準備中です。原文の説明を表示しています。

Expert-level semiconductor materials covering band theory, silicon processing, compound semiconductors, wide bandgap materials, and semiconductor device fundamentals.

日本語の概要は準備中です。原文の説明を表示しています。

Expert-level neural engineering covering neural interfaces, brain-computer interfaces, neural signal processing, deep brain stimulation, and neuroprosthetics.

日本語の概要は準備中です。原文の説明を表示しています。

Expert-level polymer chemistry knowledge. Use when working with polymerization mechanisms, polymer structure, molecular weight, mechanical properties, thermal analysis, rubber elasticity, polymer processing, or biopolymers. Also use when the user mentions 'polymerization', 'monomer', 'molecular weight', 'glass transition', 'crystallinity', 'elastomer', 'thermoplastic', 'thermoset', 'chain growth', 'step growth', 'living polymerization', or 'polymer blend'.

日本語の概要は準備中です。原文の説明を表示しています。

Expert-level bioinformatics covering sequence analysis, structural bioinformatics, database searching, phylogenetic analysis, NGS data processing, single-cell analysis, and machine learning in biology.

日本語の概要は準備中です。原文の説明を表示しています。

Execute the implementation plan by processing and executing all tasks defined in tasks.md

日本語の概要は準備中です。原文の説明を表示しています。

Execute the implementation plan by processing and executing all tasks defined in tasks.md

日本語の概要は準備中です。原文の説明を表示しています。

Use when choosing .NET concurrency patterns for async I/O, queues, pipelines, or thread safety. Keywords: async/await, channels, dataflow, Rx, lock contention, producer consumer, parallel processing.

日本語の概要は準備中です。原文の説明を表示しています。

When processing code review feedback (bot or human) before changing anything — triages, verifies and pushes back with technical reasoning — even when the user just says 'fix the comments'.

日本語の概要は準備中です。原文の説明を表示しています。

Modelo de reconhecimento de fala de propósito geral da OpenAI. Suporta 99 idiomas, transcrição, tradução para inglês e identificação de idioma. Seis tamanhos de modelo, de tiny (39M parâmetros) a large (1550M parâmetros). Use para speech-to-text, transcrição de podcasts ou processamento de áudio multilíngue. Melhor para ASR robusto e multilíngue.

日本語の概要は準備中です。原文の説明を表示しています。