「batch」の検索結果

Analyzes pooled CRISPR screens with MAGeCK (Li et al 2014), covering count generation (mageck count), the RRA two-condition workflow (mageck test using alpha-RRA over per-sgRNA negative-binomial p-values), the MLE multi-condition workflow (mageck mle with explicit design matrix and beta-score output), normalization choice (median vs total vs control-sgRNA vs spike-in), sgRNA efficiency injection, paired-sample testing, time-course design, drug-screen versus dropout-screen design matrices, MAGeCKFlute and MAGeCK-VISPR downstream visualization, and decision logic for when to use MAGeCK vs JACKS / BAGEL2 / drugZ / Chronos. Use when running a fresh CRISPR screen analysis, picking RRA vs MLE for the experimental design, choosing a normalization method from QC signatures, debugging MLE convergence failure or NaN beta scores, comparing MAGeCK output across tools, or building a batch-aware multi-cell-line / multi-condition MLE design matrix.

日本語の概要は準備中です。原文の説明を表示しています。

Build genome-browser-style multi-track figures with pyGenomeTracks (config-driven), Gviz (R), and IGV batch screenshotting. Covers BigWig coverage tracks, BED/peak overlays, gene-model rendering, Hi-C matrix tracks, BedPE link arcs, spike-in-aware normalization, and the bamCoverage --normalizeUsing trap. Use when producing publication figures of genomic loci with stacked aligned tracks (coverage, peaks, genes, interactions) for ChIP-seq, ATAC-seq, RNA-seq, Hi-C, or generic locus visualization.

日本語の概要は準備中です。原文の説明を表示しています。

Creates DE-specific diagnostic and result visualizations using DESeq2/edgeR built-in functions and lightweight ggplot2 wrappers. Covers MA plot (with the shrunken-LFC compression effect), volcano (with the apeglm caveat that p-values are unchanged), PCA on VST/rlog (never raw counts), sample distance heatmaps, top-DE-gene heatmaps with the row-scaling trap, dispersion / BCV plot interpretation, p-value histogram diagnostics, plotCounts for individual genes, blind=TRUE vs FALSE rationale, and the n=3 visualization stake. Use when generating DE diagnostic plots, choosing VST vs rlog for visualization, troubleshooting suspicious plot patterns (shifted MA cloud, batch-dominated PCA, anti-conservative p-value histogram), or building a standard QC figure panel.

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Queries myvariant.info BioThings aggregator for ClinVar, gnomAD, dbSNP, dbNSFP, COSMIC, CADD, and CIViC annotations in batched, version-tracked requests. Use when annotating variant lists from multiple databases simultaneously without managing per-source APIs, and when reproducibility-grade analyses require recording source data versions via _meta.

日本語の概要は準備中です。原文の説明を表示しています。

Bulk-query Ensembl BioMart (and other BioMart instances) for cross-database ID mapping, gene/transcript/exon coordinates, and ortholog tables. Use when batch-converting Ensembl IDs to other namespaces (HGNC, RefSeq, UniProt, Entrez), pulling gene coordinate tables for thousands of genes, building ortholog wide-tables across species, or replacing slow Ensembl REST loops with one-shot bulk export. Encodes BioMart's XML query format, R biomaRt vs Python pybiomart trade-off, mart-vs-dataset hierarchy, and the URL endpoint that's BioMart-specific (separate from rest.ensembl.org).

日本語の概要は準備中です。原文の説明を表示しています。

Visualizes ChIP-seq data using deepTools (computeMatrix, plotHeatmap, plotProfile, bamCoverage, bamCompare), pyGenomeTracks (modern INI-driven track plots), Gviz (R browser-style), EnrichedHeatmap (ComplexHeatmap-based), ChIPseeker tag heatmaps, and IGV batch screenshots. Handles bigWig normalization choices (CPM, BPM, RPGC, spike-in scaled), bamCompare operations (log2 ratio, subtract) with SES scaling, k-means clustering of heatmaps for biological subgrouping, and spike-in-scaled tracks for global-shift experiments. Use when generating publication-quality ChIP-seq signal heatmaps, profile plots, genome-browser tracks, or comparing samples visually.

日本語の概要は準備中です。原文の説明を表示しています。

Identify differentially accessible chromatin regions across conditions using DiffBind, csaw, DESeq2, or edgeR. Use when comparing ATAC-seq accessibility between treatment groups, choosing between consensus-peak vs sliding-window approaches, picking the correct normalization (full library vs reads-in-peaks), correcting batch with SVA/RUVseq, or interpreting log2FC and FDR thresholds in a chromatin context.

日本語の概要は準備中です。原文の説明を表示しています。

Optimize AgentDB performance with quantization (4-32x memory reduction), HNSW indexing (150x faster search), caching, and batch operations. Use when optimizing memory usage, improving search speed, or scaling to millions of vectors.

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自动识别并归类多张商品照片，或读取商品清单，为本次全部商品逐款制作、检查并整理电商图片。同款多照合并参考，不同款分套，保存进度以便中断后继续。

日本語の概要は準備中です。原文の説明を表示しています。

Azure AI Document Translation SDK for batch translation of documents with format preservation. Use for translating Word, PDF, Excel, PowerPoint, and other document formats at scale.

日本語の概要は準備中です。原文の説明を表示しています。

Azure AI Transcription SDK for Python. Use for real-time and batch speech-to-text transcription with timestamps and diarization.

日本語の概要は準備中です。原文の説明を表示しています。

Azure Tables SDK for Python (Storage and Cosmos DB). Use for NoSQL key-value storage, entity CRUD, and batch operations.

日本語の概要は準備中です。原文の説明を表示しています。

Automate SEO research with Ahrefs -- analyze backlink profiles, research keywords, track domain metrics history, audit organic rankings, and perform batch URL analysis through the Composio Ahrefs integration.

日本語の概要は準備中です。原文の説明を表示しています。

Build production Apache Airflow DAGs with best practices for operators, sensors, testing, and deployment. Use when creating data pipelines, orchestrating workflows, or scheduling batch jobs.

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Save, load, update, delete, merge, and navigate entity objects using TMS Aurelius ORM (TObjectManager). Use when the user asks how to persist or retrieve data with Aurelius, manage object lifetime, work with associations or collections at runtime, handle transactions, use cached updates, or control concurrency. Does NOT cover query DSL or criteria/projections (those are in a separate skill). Triggers on requests like "save an entity with Aurelius", "load a customer from the database", "add items to a collection", "how do I update an object", "flush changes", "delete a record with Aurelius", "merge a transient object", "how do transactions work in Aurelius", "batch updates Aurelius".

日本語の概要は準備中です。原文の説明を表示しています。

Execute implementation plans in batches with review checkpoints

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Find the first batch of foreign-trade prospect companies from public web, LinkedIn, and user-authorized data sources such as customs exports, trade show lists, association directories, CRM/Excel files, or historical customer data, then output a conservative, structured candidate list ready for lead screening.

日本語の概要は準備中です。原文の説明を表示しています。

Codex workflow tips from Boris Cherny (creator of Codex) and the Codex team. Use when: setting up Codex, optimizing workflows, running parallel sessions, configuring AGENTS.md, using skills/commands, subagents, hooks, MCP integrations, or learning best practices. Covers: git worktrees, plan mode, verification, permissions, Slack MCP, BigQuery, prompting tips, plugins, custom agents, sandboxing, keybindings, status lines, output styles, customization, /simplify for code quality, /batch for parallel code migrations, /loop for scheduled tasks, code review agents, /btw for mid-task questions, /effort max reasoning, remote control sessions, voice mode, setup scripts, session naming, /color, PostCompact hook, auto mode, /schedule cloud jobs, iMessage plugin, auto-memory, and auto-dream, mobile app, session teleporting, Cowork Dispatch, Chrome extension, Desktop app, /branch forking, --bare SDK startup, --add-dir multi-repo, --agent custom agents, /voice input.

日本語の概要は準備中です。原文の説明を表示しています。

Claude Code workflow tips from Boris Cherny (creator of Claude Code) and the Claude Code team. Use when: setting up Claude Code, optimizing workflows, running parallel sessions, configuring CLAUDE.md, using skills/commands, subagents, hooks, MCP integrations, or learning best practices. Covers: git worktrees, plan mode, verification, permissions, Slack MCP, BigQuery, prompting tips, plugins, custom agents, sandboxing, keybindings, status lines, output styles, customization, /simplify for code quality, /batch for parallel code migrations, /loop for scheduled tasks, code review agents, /btw for mid-task questions, /effort max reasoning, remote control sessions, voice mode, setup scripts, session naming, /color, PostCompact hook, auto mode, /schedule cloud jobs, iMessage plugin, auto-memory, and auto-dream, mobile app, session teleporting, Cowork Dispatch, Chrome extension, Desktop app, /branch forking, --bare SDK startup, --add-dir multi-repo, --agent custom agents, /voice input.

日本語の概要は準備中です。原文の説明を表示しています。

Pre-spend contradiction gate for AI-video runs: checks every prompt in the batch, blocks on style / character / physics mismatch. Triggers 'validate the prompts', 'check the storyboard'.

日本語の概要は準備中です。原文の説明を表示しています。

Construa, depure e otimize aplicativos com Claude API / SDK Anthropic. Aplicativos construídos com esta skill devem incluir cache de prompt. Também lida com migração de código Claude API existente entre versões de modelo (4.5 → 4.6, 4.6 → 4.7, substituições de modelo descontinuado). TRIGGER quando: código importa `anthropic`/`@anthropic-ai/sdk`; usuário solicita Claude API, SDK Anthropic ou Managed Agents; usuário adiciona/modifica/afina um recurso Claude (cache, thinking, compaction, tool use, batch, files, citations, memory) ou modelo (Opus/Sonnet/Haiku) em um arquivo; dúvidas sobre prompt caching / cache hit rate em um projeto SDK Anthropic. SKIP: arquivo importa `openai`/SDK de outro provedor, nome de arquivo como `*-openai.py`/`*-generic.py`, código agnóstico de provedor, programação geral/ML.

日本語の概要は準備中です。原文の説明を表示しています。

Use when the user asks to generate or edit images via the OpenAI Image API (for example: generate image, edit/inpaint/mask, background removal or replacement, transparent background, product shots, concept art, covers, or batch variants); run the bundled CLI (`scripts/image_gen.py`) and require `OPENAI_API_KEY` for live calls.

日本語の概要は準備中です。原文の説明を表示しています。

Plataforma GPU serverless em nuvem para executar workloads de ML. Use quando você precisar de acesso GPU sob demanda sem gerenciamento de infraestrutura, fazendo deploy de modelos de ML como APIs, ou executando jobs em batch com auto-scaling.

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Processamento escalável de dados para workloads de ML. Execução em streaming em CPU/GPU, suporta Parquet/CSV/JSON/imagens. Integra-se com Ray Train, PyTorch, TensorFlow. Escala de uma única máquina para centenas de nós. Use para inferência em lote, pré-processamento de dados, carregamento de dados multi-modal ou pipelines distribuídos de ETL.

日本語の概要は準備中です。原文の説明を表示しています。