1.8万 件 ・ 関連度順
概要と使いどころ
Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.
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Research transit, walking, cycling, pedestrian infrastructure, and airport access for a site. Use for mobility, accessibility, or walkability questions tied to a location.
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Unified Python interface to 40+ bioinformatics web services: UniProt proteins, KEGG pathways, ChEMBL/ChEBI/PubChem, BLAST, cross-database ID mapping, GO annotations, PPI. For deep single-DB queries use dedicated tools (gget for Ensembl, pubchempy for PubChem); bioservices excels at cross-database workflows.
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Query the ZINC22 virtual compound library (CartBlanche API, billions of make-on-demand + purchasable molecules). Look up substances by ZINC ID, resolve a SMILES to its ZINC ID (exact match), inspect purchasability/catalogs, and assemble compound sets for docking. Property (MW/logP) filtering is done locally with RDKit. For bioactivity use chembl-database-bioactivity; for approved drugs use drugbank-database-access.
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Query ChEMBL (2M+ compounds, 19M+ bioactivity measurements, 13K+ targets) via the public REST/JSON API with plain `requests` — no SDK install required. Search compounds, retrieve IC50/Ki/EC50 bioactivities, find target inhibitors, run SAR, access drug mechanism/indication data.
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Predict RNA secondary structure, MFE folding, base-pair probabilities, RNA-RNA interactions via ViennaRNA Python bindings. Pipeline: sequence → MFE → partition function and pair-probability matrix → dot-bracket → duplex. Use for siRNA/sgRNA targeting, ribozyme design, RNA accessibility. Use RNAfold CLI for batch use without Python.
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Python library for biology: sequence manipulation (DNA/RNA/protein), pairwise/multiple alignment, phylogenetic trees (NJ, UPGMA), diversity (Shannon, Faith PD, Bray-Curtis, UniFrac), ordination (PCoA, CCA, RDA), stats (PERMANOVA, ANOSIM, Mantel), file I/O (FASTA, FASTQ, Newick, BIOM). Use for microbiome, community ecology, or phylogenetics.
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Analyze contractor bids against CWICR benchmarks. Identify pricing anomalies, compare bid components, and support bid evaluation decisions.
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Writes, explains, debugs, and optimizes BI calculations - Power BI / Fabric DAX measures and calculated columns, Tableau calculated fields (FIXED/INCLUDE/EXCLUDE LOD expressions, table calculations), and Looker LookML measures, dimensions, and derived tables. Use it whenever the request involves DAX, CALCULATE, a Power BI measure, a Tableau calc or LOD, LookML, or a business metric such as YoY, YTD, rolling 12 months, running total, percent of total, distinct customers, ranking, new vs returning customers, closing balances, or basket analysis. Use it especially when someone says a measure "shows the wrong total", "is blank", "ignores my slicer/filter", "repeats the same value on every row", or "is slow" - those are filter context, context transition, LOD order-of-operations, or fanout bugs this skill is built to diagnose. Produces the formula, the context it evaluates in, and a hand-checkable test with expected numbers.
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BigQuery/Snowflake接続、EDA、可視化、Marimoノートブック作成を行うサブエージェント。 データ分析関連の4つのルール（data_analysis, visualization, notebook, marimo_variable_naming）を統合。 「データ分析して」「BigQueryに接続」「EDAを実行」「Marimoで分析」等のリクエストで発動。
Route Biopython computational biology workflows across sequence objects, file formats, alignments, structures, web databases, BioSQL, motifs, restriction enzymes, and specialized modules.
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Use Biotite for computational molecular biology workflows: sequence analysis, structure analysis, biological database access, file-format conversion, application wrappers, and optional molecular interfaces.
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Use bitsandbytes for k-bit PyTorch quantization, Hugging Face quantized model loading, 8-bit and paged optimizers, direct quantized layers/functions, and backend installation diagnostics.
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Applies Han's shared Human-Readable Output Standard to a target you already have — a file on disk, text pasted into the prompt, or a draft already produced in the conversation — by dispatching the readability-editor to rewrite its prose so the main point comes first, headings are descriptive, each paragraph carries one idea, and sentences stay short and active, while preserving every fact. Use when you want to make a document or draft readable, edit or polish prose for readability, clean up writing, tighten wording, or re-apply the readability standard to something already written. Rewrites prose only, leaving code, diagrams, and citation identifiers unchanged. Does not write new feature or system documentation — use project-documentation. Does not restructure code or review it — use refactor to restructure code and code-review to audit it. Does not judge the underlying work or raise findings; it only rewrites the writing.
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Guide for mobile-specific consent management covering Apple ATT framework for iOS, Android permission model, in-app consent flows, SDK consent propagation to third-party libraries, and IDFA/GAID handling. Addresses platform-specific requirements alongside GDPR and ePrivacy compliance for mobile applications.
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Executes GDPR Article 20 data portability requests, covering machine-readable format requirements (JSON, CSV, XML), direct controller-to-controller transfer mechanisms, and scope limitations to data provided by the subject on consent or contract basis. Activate for portability, data export, Art. 20, data transfer queries.
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Governs biometric data processing for employee timekeeping and access control under Art. 9 GDPR special category rules. Covers fingerprint, facial recognition, iris scanning, and voice recognition. Applies necessity tests, evaluates less intrusive alternatives, and implements employee objection procedures. Keywords: biometric data, Art. 9, fingerprint, facial recognition, access control, timekeeping, special category.
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Guides the combined DPIA and AI Act conformity assessment for AI systems processing personal data. Covers EDPB-EDPS Joint Opinion 5/2021, training data lawfulness under Art. 6 and Art. 9, Art. 22 automated decision-making, algorithmic bias detection, and NIST AI RMF MAP function. Keywords: AI privacy, DPIA, AI Act, algorithmic bias, automated decision-making, Art. 22, training data, NIST AI RMF.
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You are an accessibility expert specializing in WCAG compliance, inclusive design, and assistive technology compatibility. Conduct audits, identify barriers, and provide remediation guidance.
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Writes and reviews composables for Compose and CMP: the Route/Screen/leaf split, state-read placement and stability, loading/empty/error UX states, LazyColumn lists and grids, animation choice, accessibility and semantics, design-system tokens, CMP Res resources, Coil images, and keyboard/focus. Use when touching @Composable code, recomposition, stability, LazyColumn, animation, shimmer or skeleton, accessibility, theme, colors, Res.string, Coil, focus, or keyboard. Do NOT use for MVI, error tiers, or module graph (compose-architecture), ViewModel or data work (compose-feature, compose-data), Gradle or module work (compose-project), or expect/actual splits (compose-platform).
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Use Jacobian's MCP operations for nontrivial mathematical computation, finite search, structural analysis, formal checking, probability, or optimization.
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Get content from Bilibili videos: official subtitles, danmaku (density/peaks/sample), comments. When no subtitles exist (no 投稿字幕), fall back to downloading audio + ASR transcription via FunASR.
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Fix deployed Rust binaries not reflecting code changes when using docker buildx. Use when: (1) Code changes are verified locally (tests pass) but production behavior doesn't change after deploy, (2) Docker image has a new tag but contains old compiled binary, (3) Dockerfile uses multi-stage build with dependency pre-compilation layer and source copy layer. Docker buildx layer caching can serve stale compilation output even when source files change, especially with cross-compilation (--platform linux/amd64).
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Think and work like an expert Microbial Physiologist. Use when a task calls for Microbial Physiologist judgment. Reasons from Monod/chemostat (μ = D), YX/S and Pirt maintenance, Crabtree/overflow, 13C-MFA and FBA, and BMSAB taxonomy; treats OD-as-biomass yield error, FBA-as-measured-flux, washout misread, and portable ms across media as first-class failure modes.
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