Bridge Claude Code auto-memory into AgentDB with ONNX embeddings, deduplicate, and enable unified cross-project search
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概要と使いどころ
Bridge Claude Code auto-memory into AgentDB with ONNX embeddings, deduplicate, and enable unified cross-project search
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Generate embeddings via npx ruvector@0.2.25 embed text (ONNX all-MiniLM-L6-v2, 384-dim), normalize, and store in HNSW index
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Replay a recorded session trajectory against the same URL or a mutated variant; uses browser-selectors embedding similarity to recover from DOM drift
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Vector search via embeddings_* (large-scale HNSW) and ruvllm_hnsw_* (WASM router for ≤11 hot patterns), with RaBitQ 1-bit quantization for 32× memory reduction
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Build or revise a slide deck (pptx by default; pdf or html on request). Use whenever a build task's artifact kind is presentation, or the user asks for a deck, slides, or a presentation. Covers per-slide HTML authoring, the StylePlan theme system, font embedding, deck assembly, render gates, and the PPTX export.
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Command-line interface for Ollama - Local LLM inference and model management via Ollama REST API. Designed for AI agents and power users who need to manage models, generate text, chat, and create embeddings without a GUI.
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Applies UMAP-learn to nonlinear dimensionality reduction, 2D/3D embeddings, clustering preprocessing, supervised or semi-supervised UMAP, DensMAP, AlignedUMAP, and Parametric UMAP workflows.
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Supports work with Outpost Bio's open microbiome foundation models - the Waypoint checkpoints (Waypoint-6m, Waypoint-45m, Waypoint-170m), the Atlas pretraining corpus, the Compass eight-task benchmark, or the `waypoint` CLI from the `waypoint-bio` package. Covers embedding microbiome samples, fine-tuning on taxonomic abundance data, benchmarking a checkpoint on Compass, pretraining a GPT-2 model on taxonomic abundance profiles, and converting MetaPhlAn, Kraken2, QIIME 2, or MGnify abundance tables into waypoint format.
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Builds with and operates Pi, the minimal terminal coding harness. Use for installing Pi, configuring providers/models/settings/environment variables, creating Pi skills/extensions/packages/themes/prompt templates, embedding Pi through the SDK, integrating over RPC or JSON event streams, parsing sessions, running local models through the llama.cpp router, developing custom Pi providers and TUI components, or using ecosystem packages such as pi-subagents (delegation/orchestration), pi-mcp-adapter (MCP servers), pi-interview (interactive forms), and pi-web-access (web search, fetching, video understanding).
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Featurizes small molecules with Molfeat for QSAR/QSPR, chemical similarity, virtual screening, and molecular ML. Covers ECFP/MACCS fingerprints, RDKit descriptors, pharmacophores, pretrained embeddings, configuration persistence, and molecule-to-label alignment.
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Analyzes user-requested Screenpipe history windows to detect repeated research workflows, match existing scientific skills, and stage new skill drafts or composition recipes for review. Requires a reachable Screenpipe HTTP API, normally on localhost:3030. Detection and embedding inference run locally; the selected LLM receives redacted app/title cluster summaries and matched skill descriptions. Use only when the user explicitly asks to analyze their recent work and propose skills.
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Queries the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene expression slices, Census summary counts, source H5AD URIs/downloads, embeddings, spatial Census data, or reference atlas comparisons across organisms, tissues, diseases, assays, and cell types. For analyzing your own local single-cell data use scanpy, anndata, or scvi-tools.
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Uses the Biohub esm Python SDK for ESM3 protein generation, ESMC embeddings, and ESMFold2 all-atom folding. Applies to local model inference and Biohub hosted clients, including former Forge workflows; distinguishes the separate legacy fair-esm distribution.
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Azure OpenAI SDK for .NET. Client library for Azure OpenAI and OpenAI services. Use for chat completions, embeddings, image generation, audio transcription, and assistants.
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Build production RAG pipelines and persistent agent memory using Pinecone as the vector database backend. ALWAYS USE THIS SKILL when the user mentions Pinecone, wants to index documents for semantic search, build a retrieval-augmented generation system, store agent memory across sessions, implement hybrid search, or connect an LLM to a searchable knowledge base — even if they don't say "Pinecone" explicitly. Also use when the user asks about vector databases for RAG, namespace isolation for multi-tenant agents, embedding pipelines, or scaling a knowledge base beyond what local storage can handle. DO NOT use for local-only vector stores (Chroma, FAISS, pgvector) or pure keyword search with no semantic component.
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Build agentic applications with GitHub Copilot SDK. Use when embedding AI agents in apps, creating custom tools, implementing streaming responses, managing sessions, connecting to MCP servers, or creating custom agents. Triggers on Copilot SDK, GitHub SDK, agentic app, embed Copilot, programmable agent, MCP server, custom agent.
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High-performance vector similarity search engine for RAG and semantic search. Use when building production RAG systems requiring fast nearest neighbor search, hybrid search with filtering, or scalable vector storage with Rust-powered performance.
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Memory is the cornerstone of intelligent agents. Without it, every interaction starts from zero. This skill covers the architecture of agent memory: short-term (context window), long-term (vector stores), and the cognitive architectures that organize them. Key insight: Memory isn't just storage - it's retrieval. A million stored facts mean nothing if you can't find the right one. Chunking, embedding, and retrieval strategies determine whether your agent remembers or forgets. The field is fragm
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Use when the user wants to connect cognee to external services — switching LLM or embedding providers (OpenAI, Azure, Gemini, Anthropic, Ollama, OpenRouter), changing databases (Postgres, PGVector, Neo4j, Neptune, Turso), S3 storage, or the MCP server for IDE integration.
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Use when cognee is slow, expensive, or hitting rate limits — speeding up or throttling ingestion (remember/cognify batching, chunk size, LLM and embedding rate limits, per-stage models), cutting read latency, estimating cost before ingesting, running work in the background, or planning how to scale a deployment.
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Build a TYPED citation/reference graph over an ingested corpus — not just embeddings. Flat similarity retrieval cannot tell you that document A *overrules* B, *distinguishes* C, or *relies_on* D. This skill extracts every inter-document reference, classifies the edge TYPE with LLM judgment, and writes first-class typed edges via `gbrain link`, so `gbrain graph-query --type` can walk the argument ("everything this brief relies on, minus anything overruled since"). Every cite-heavy corpus is the same shape: law, academic papers, patents, regulatory filings, a book's bibliography.
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Entry point for 9Router — local/remote AI gateway with OpenAI-compatible REST for chat, image, TTS, embeddings, web search, web fetch. Use when the user mentions 9Router, NINEROUTER_URL, or wants AI without writing provider boilerplate. This skill covers setup + indexes capability skills; fetch the relevant capability SKILL.md from the URLs below when needed.
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Zoom Virtual Agent Android integration via WebView. Use for Java/Kotlin bridge callbacks, native URL handling, support_handoff relay, and lifecycle-safe embedding.
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Zoom Meeting SDK for Android native apps. Use when embedding Zoom meetings in Android with default/custom UI, PKCE + SDK auth, join/start flows, and Meeting SDK API integration.
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