「similarity」の検索結果

Implement semantic vector search with AgentDB for intelligent document retrieval, similarity matching, and context-aware querying. Use when building RAG systems, semantic search engines, or intelligent knowledge bases.

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Molecular featurization hub (100+ featurizers) for ML. SMILES to fingerprints (ECFP, MACCS, MAP4), descriptors (RDKit 2D, Mordred), pretrained embeddings (ChemBERTa, GIN, Graphormer), pharmacophores. Scikit-learn compatible with parallelization/caching. For QSAR, virtual screening, similarity, and molecular DL.

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Query RCSB PDB (200K+ structures) via the public REST + GraphQL APIs with plain `requests` (no SDK). Search by text, attribute, sequence, or 3D structure similarity (Search API); retrieve metadata via GraphQL (Data API); download PDB/mmCIF from files.rcsb.org. For AlphaFold predictions use alphafold-database-access; for protein sequences only use uniprot-protein-database.

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Query PubChem (110M+ compounds) directly via the PUG-REST/JSON API with plain `requests` — no SDK install required. Search by name/CID/SMILES/InChIKey/formula, retrieve properties (MW, XLogP, TPSA, H-bond counts), do similarity/substructure searches with async ListKey polling, fetch synonyms, descriptions, assay summaries, and download SDF/PNG. For local cheminformatics use rdkit; for bioactivity-centric workflows use chembl-database-bioactivity.

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Cheminformatics toolkit for molecular analysis and virtual screening: SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints (Morgan/ECFP, MACCS), Tanimoto similarity, SMARTS substructure filtering, Lipinski drug-likeness, reaction enumeration, 2D/3D coordinates. For simpler API use datamol; use RDKit for fine-grained sanitization, custom fingerprints, or SMARTS/reaction control.

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Pythonic RDKit wrapper with sensible defaults for drug discovery. SMILES parsing, standardization, descriptors, fingerprints, similarity, clustering, diversity selection, scaffold analysis, BRICS/RECAP fragmentation, 3D conformers, and visualization. Returns native rdkit.Chem.Mol. Prefer datamol for standard workflows; use RDKit directly for advanced control.

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Parse local DrugBank XML for drug info, interactions, targets, and properties. Search by ID/name/CAS, extract DDIs with severity, map targets/enzymes/transporters, compute SMILES similarity. Primary via local XML; REST API rate-limited (3k/month dev). For live bioactivity use chembl-database-bioactivity; for compound properties use pubchem-compound-search.

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MS spectral matching and metabolite ID with matchms. Import spectra (mzML, MGF, MSP, JSON), filter/normalize peaks, score similarity (cosine, modified cosine, fingerprint), build reproducible pipelines, identify unknowns vs spectral libraries. Use pyopenms for full LC-MS/MS proteomics.

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Persistent compounding memory for AI agents. 5 default MCP tools: session_start, session_end, remember, recall, check. Full surface: 6 tools with --full (adds check_action); 13 tools with AR_EXTRAS=1 --full. Two-verb model: inhale (session_start) and exhale (session_end). Correction-first memory with decision trail tracking, watch_for warnings, palace rooms with salience scoring, cross-project insight matching, same-day journal merging, ambient recall hooks. Local markdown only. Zero cloud, zero telemetry, Obsidian-compatible. Optional Supabase backend: when configured via `ar setup supabase`, recall() uses pgvector cosine similarity on OpenAI/Voyage embeddings instead of keyword search — same API, semantic understanding. Gracefully degrades to local search if not configured.

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Implement semantic vector search with AgentDB for intelligent document retrieval, similarity matching, and context-aware querying. Use when building RAG systems, semantic search engines, or intelligent knowledge bases.

日本語の概要は準備中です。原文の説明を表示しています。

Provides Qdrant vector database integration patterns with LangChain4j. Handles embedding storage, similarity search, and vector management for Java applications. Use when implementing vector-based retrieval for RAG systems, semantic search, or recommendation engines.

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Use Databricks built-in AI Functions (ai_classify, ai_extract, ai_summarize, ai_mask, ai_translate, ai_fix_grammar, ai_gen, ai_analyze_sentiment, ai_similarity, ai_parse_document, ai_prep_search, ai_query, ai_forecast) to add AI capabilities directly to SQL and PySpark pipelines without managing model endpoints. Also covers document parsing and building custom RAG pipelines (parse → prep_search → index → query).

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Input your best customers and find 100+ companies that match the profile. Uses firmographic data, tech stack, growth signals, and similarity scoring to identify ideal prospects. Use when building target account lists or expanding to new markets.

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Semantic memory and context - store and retrieve information with embeddings for similarity search. Use for long-term memory, context recall, and knowledge persistence.

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Guides Researchers through Faiss installation, dense and binary similarity search, index training and composition, persistence and evaluation, and explicitly gated CPU/GPU interoperability workflows.

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Guides Gensim topic modelling, document indexing, embeddings, similarity retrieval, downloader, and script workflows for Python NLP and IR tasks.

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Guides agents using the datamol Python package for RDKit-first molecular IO, preparation, fingerprints, similarity, structure generation, visualization, and utility workflows.

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Spectral vector search using graph Laplacian eigenstructure. Use when cosine/L2 similarity misses latent structure in your embeddings.

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This skill should be used when the user asks for a "sensitivity reader", "authenticity reader", "cultural review", "is this portrayal okay", "real people in my novel", "defamation", "can I use song lyrics", "epigraph permission", "permissions", "quote permission", "fair use", "AI disclosure", "do I need to disclose AI", "send to my editor", "editorial round", "Word file for my editor", "editor review copy", "co-author", "collaborate on a book", "shared world", "back up my book", "does this echo my source", "similarity check", "check overlap with my earlier books", or wants to run human editorial, ethics, permissions, or collaboration workflows around a story project. NOT for contracts or selling rights (use publishing), or reader feedback rounds and review copies for readers, including the GitHub review-copy setup (use feedback-triage).

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Analyzes test suites to identify redundant and duplicate test cases using coverage analysis, semantic similarity, and execution results. Use this skill when you need to reduce test suite size, identify redundant tests, optimize test execution time, analyze test coverage overlap, find tests with identical behavior, or improve test suite maintainability. Triggers when users ask to deduplicate tests, find redundant test cases, reduce test suite size, identify duplicate tests, or optimize test coverage.

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Identify bug-introducing commits using semantic analysis that extends traditional SZZ algorithm. Distinguishes semantic changes from refactorings or code movements using control-flow and data-flow similarity analysis. Use when analyzing bug-fix commits to trace back to bug-introducing changes, investigating software evolution, conducting empirical studies on defect prediction, or reducing false positives in bug localization. Supports git repositories and provides explanations for why commits are identified as bug-introducing.

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Cloudflare Vectorize vector database for semantic search and RAG. Use for vector indexes, embeddings, similarity search, or encountering dimension mismatches, filter errors.

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Think and work like an expert Computer Vision Scientist. Use when a task calls for Computer Vision Scientist judgment. Reasons from image formation, projective geometry (pinhole intrinsics and extrinsics, epipolar/PnP/bundle adjustment, similarity-scale ambiguity), and COCO/LVIS AP mechanics through DINOv3/SigLIP 2 foundation baselines, RF-DETR/YOLO26/SAM 3 models, COLMAP 4/GLOMAP and VGGT geometry, pycocotools/TrackEval/BOP evaluation, and CVPR reporting and EU AI Act limits while treating train–test and pretraining leakage, AP evaluation-setting gaming, preprocessing mismatches (EXIF, BGR, aliased resizing), label noise, and camera-convention and scale errors as first-class failure modes.

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Think and work like an expert Aerospace Engineer. Use when a task calls for Aerospace Engineer judgment. Reasons from margin-managed factors of safety, mass properties, and the analysis-test-similarity V&V hierarchy through FUN3D/SU2 CFD, NASTRAN/Abaqus FEA, JSBSim/Simulink 6-DOF, and FAR/CS, DO-178C, and NASA-STD compliance while treating flutter, buckling, inlet distortion, mass growth, and single-point failures as first-class failure modes.

日本語の概要は準備中です。原文の説明を表示しています。