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Style every matplotlib figure like the Stata 18/19 default (stcolor) scheme — Arial embedded as TrueType, white background, recessive light-gray grid below the data, no top/right spines, unframed legends, and the validated blue/red/gray palette. Use whenever a task generates or restyles charts, plots, or figures for papers, reports, or slides, even if the user doesn't mention Stata — this is the house style for all publication figures. Also use when asked to make figures "look like Stata", match the stcolor scheme, or restyle existing matplotlib output.

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Convert between LaTeX and Microsoft Word for academic manuscripts in either direction, and assemble .tex from mixed sources. Fires on: converting .tex/LaTeX to Word/.docx ("tex to docx", "latex to word", "tex2docx", "convert to word", "pandoc convert"); converting .docx manuscripts to LaTeX for editing and back ("convert to latex", "manuscript", "footnotes", "reference doc", the docx-to-tex-to-docx round-trip / academic paper editing pipeline); high-fidelity delivery where plain pandoc loses tables, mangles cross-references, or fails on custom macros — booktabs/regression tables, OMML equations, cleveref, \estauto, \@@input, \thanks, TikZ, native Word tables, longtable, siunitx; and building .tex from mixed PDF/docx/LLM-generated sources. Replaces and reroutes the retired skills manuscript-editing-template-latex, latex-to-docx-fidelity, tex2docx, and latex-from-mixed-sources.

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Iterative manuscript improvement workflow where a reviewer agent critiques, an author agent revises, a verifier checks the revision, and the loop repeats until acceptance or a human-pause condition is reached. Use for virtual peer review, reviewer-author revision loops, rebuttal preparation, resubmission polishing, journal paper improvement, response-to-reviewers drafting, and deciding when additional data, experiments, theory, modeling, or author judgment is required before further revision.

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Use when a task needs the judgment of a Computer and Information Research Scientist — designing an ablation to attribute an empirical gain, budgeting an NSF CISE proposal against page and content limits, deciding what reproducibility artifacts to release with a paper, screening a draft for mathiness or terminology misuse, or scoping the consent/ethics review needed before running an experiment on real users.

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Use when a task needs the judgment of a Biology Professor at a research university — writing or defending an NIH/NSF grant budget, deciding authorship order on a paper, navigating an IACUC or biosafety protocol, mentoring a PhD student through a stalled project, or converting a course when active-learning data doesn't match student pushback.

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Use when a task needs the judgment of an Aviation Inspector — determining whether an air carrier's fleet is in compliance with an Airworthiness Directive across a maintenance-records sample, deciding where the FAA's compliance-and-enforcement ladder places a finding (compliance action vs. Letter of Correction vs. civil penalty vs. certificate action), auditing a Safety Management System for a functioning safety-assurance loop rather than paperwork completeness, scoping a records-sampling strategy across a fleet under surveillance, or deciding whether to ground an aircraft pending an AD compliance finding.

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Generate publication-ready methods sections, figure legends, supplementary tables, and data availability statements from ENCODE analysis provenance. Implements the scientific documentation standards requiring complete metadata reporting. Use when the user needs to write methods, generate figure legends, create supplementary tables, draft data availability statements, compile tool citations, or auto-generate any publication text from their ENCODE analysis. Trigger on: methods section, figure legend, supplementary table, data availability, tool citations, publication writing, manuscript, write methods, methods draft, write up, write-up, paper writing, reproducible methods.

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Teach a topic, video, article, codebase change, spec, or transcript until the user demonstrably understands it, using staged instruction, a running checklist doc, and quizzes. Use whenever the user says "teach me", "explain this in detail", "help me understand X", "/teach-me", "walk me through this", "I want to learn X", "understand this deeply", or pastes a YouTube URL, article, paper, PR, or spec and asks to understand it rather than summarize it. Also use when the user wants study notes or raw material from a source they are learning. Do NOT use for a quick factual lookup, a summary request, or when the user just wants the answer.

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Writing abstracts that get papers read — structured content, the 5-sentence core, and journal-specific constraints.

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Run a Meta-Harness-style optimization loop NATIVELY — automatically search over the scaffolding around a FIXED base model (memory, retrieval, context construction, prompt templates, summarization, tool-selection logic) by proposing candidate variants, scoring each on a cheap deterministic eval, and keeping a Pareto frontier of quality vs cost — using native Agent / Workflow / loop tools instead of a standalone Python harness. Use this whenever the user wants to optimize, evolve, tune, distill, or search over a harness, scaffold, prompt system, memory or retrieval policy, context-assembly code, or summarizer while keeping the model fixed; whenever they mention Meta-Harness, harness optimization, scaffold evolution, automatic prompt/memory optimization, an evolutionary or Pareto search over candidate implementations, or "make the harness/agent better without retraining"; and whenever the gain must come from the code AROUND the model rather than the model weights. Reproduces the Meta-Harness paper's method natively, with no claude_wrapper.py and no metered solver API.

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Reformat LaTeX papers for a specified venue, year, track, and submission stage. Apply official templates and check layout, bibliography, page limits, and anonymization while preserving scientific content.

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Generate and edit images with Dreamfield's OpenAI-compatible gpt-image-2 image API. Use when the user asks Codex to create, test, or save an image from a text description, make wallpaper or illustration assets, perform image-to-image generation from reference images or clipboard images, use masks/inpainting, verify Dreamfield image generation, or troubleshoot image-generation responses such as empty data, b64_json, URL output, quota errors, or content policy errors.

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Academic research assistant — literature review + methodology (quant/qual) + paper outline (IMRaD) + citation + research gap analysis

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GAN-inspired Generator-Evaluator agent harness for building high-quality applications autonomously. Based on Anthropic's March 2026 harness design paper.

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The academic research platform for AI agents. Submit papers, review research, build consensus, and push toward AGI — together.

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You are an academic writing expert specializing in scholarly papers, literature reviews, research methodology, and thesis writing. You must adhere to strict academic standards in all outputs.## Core Requirements1. **Output Format**: Use Markdown exclusively for all writing outputs and always wrap the main content of your response within <ama-doc></ama-doc> tags to clearly distinguish the core i...

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Add real references and standardize citations for research papers and theses (为科研论文和毕业论文添加真实参考文献并规范引用标注)

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Official OpenProof Client. Register agents and publish research to the Founding Corpus. Supports Articles (Markdown) and Papers (LaTeX/JSON).

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Reference for MCP Jupyter tools (kernel management, cell execution, Papermill). Use when executing notebooks, managing kernels, or running code interactively via MCP.

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Auto-search and summarize latest AI/agent papers.

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Fetch daily arXiv announcements (cs.RO), filter by research relevance, generate a structured markdown digest, and sync matched papers to a Zotero collection with arXiv PDFs attached.

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Applies insights from MetaGPT paper on how structured communication, role specialization, and SOPs prevent coordination failures in multi-agent LLM systems

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Build publication-quality figures in R with ggplot2 using the grammar of graphics (data + aesthetics + geometries + scales + facets + themes) with CVD-safe palettes, cairo_pdf TrueType embedding, programmatic aes via tidy evaluation, and the theme_classic publication baseline. Use when producing static figures in R for papers, presentations, or reports.

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Search arXiv preprint repository for papers in physics, mathematics, computer science, quantitative biology, and related fields

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