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概要と使いどころ
Use when you must prove an analysis ran on the intended data or lock a dataset version. Builds a deterministic content-hash manifest (file SHA-256, schema, per-column value hashes), verifies later copies against it for drift, and diffs two manifests.
日本語の概要は準備中です。原文の説明を表示しています。
Renamed to /model-assessment in v6 (removed in v7).
日本語の概要は準備中です。原文の説明を表示しています。
Use when writing a literature review article (narrative, scoping PRISMA-ScR or systematic). Scaffolds a 7-part skeleton with a scope and non-overlap statement, summary-table stubs and reporting-guideline wiring, without inventing citations. Original research is /write-paper.
日本語の概要は準備中です。原文の説明を表示しています。
Use when building, auditing or freezing a journal submission package from the canonical manuscript. Detects drift between the source and the per-journal submission copy, builds byte-preserving packages with manifests, and records current, stale or frozen status.
日本語の概要は準備中です。原文の説明を表示しています。
Use when checking whether a manuscript's references are real. Audits each citation against PubMed and CrossRef, flags fabricated or mismatched entries and writes qc/reference_audit.json. Audit-only; never edits references or refs.bib. Citation-key checks are /manage-refs.
日本語の概要は準備中です。原文の説明を表示しています。
Use when a manuscript comes back with reviewer or editor comments. Numbers every comment, classifies it MAJOR/MINOR/REBUTTAL, drafts a point-by-point response with tracked manuscript changes, routes new analyses to /analyze-stats and writes the cover letter.
日本語の概要は準備中です。原文の説明を表示しています。
Use when finding papers or building a reference list. Searches PubMed, Semantic Scholar and bioRxiv/medRxiv, includes only references verified through an API, and generates BibTeX. Auditing an existing reference list is /verify-refs.
日本語の概要は準備中です。原文の説明を表示しています。
Use when drafting an IRB or ethics research protocol. Writes Background, Study Design, Sample Size and Statistical Plan in full prose and leaves institution-specific sections as TODO skeletons. Filling an institutional Word form is /fill-protocol.
日本語の概要は準備中です。原文の説明を表示しています。
Use when checking your own manuscript before submission from a reviewer's perspective. Returns anticipated Major/Minor comments with fixes, including numerical, citation and leakage checks, with an optional multi-reviewer panel. Someone else's paper is /peer-review.
日本語の概要は準備中です。原文の説明を表示しています。
Use when references must be written, rendered or converted. Checks [@key] citation keys, renders the reference list with a journal CSL via pandoc, converts [N] markers, injects Zotero Word field codes and runs manuscript-DOCX cross-reference QC. Read-only auditing is /verify-refs.
日本語の概要は準備中です。原文の説明を表示しています。
Renamed to /model-assessment in v6 (removed in v7).
日本語の概要は準備中です。原文の説明を表示しています。
Use when a trained medical-imaging model needs its documentation. Fills a Model Card and a Datasheet for its dataset from facts you supply, adds a METRIC-informed data-quality pass and gates that no required section is empty. Never invents numbers, provenance or licence.
日本語の概要は準備中です。原文の説明を表示しています。
Use when validating or evaluating a trained medical-imaging model. Audits split leakage and validation design, computes task-correct held-out metrics (Dice + HD95, AUROC + AUPRC, FROC, calibration), and covers uncertainty/OOD and Grad-CAM explainability, each with a gate.
日本語の概要は準備中です。原文の説明を表示しています。
Use when data needs statistical analysis. Runs reproducible Python/R code for Table 1, diagnostic accuracy, agreement, regression, survival, propensity score, survey-weighted and repeated-measures models, with publication tables. Sample size is /calc-sample-size; pooling studies is /meta-analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Use when designing or auditing how an LLM or multimodal LLM is evaluated on a clinical task (report generation, VQA, text extraction). Covers reference standard, clinical-efficacy metrics beyond BLEU/ROUGE, hallucination, contamination and prompt sensitivity. Imaging models are /model-assessment.
日本語の概要は準備中です。原文の説明を表示しています。
Use when running a systematic review and meta-analysis, DTA or intervention. Covers PROSPERO protocol, search, screening, extraction, risk of bias (QUADAS-3, RoB 2, ROBINS-I), bivariate/HSROC or random-effects pooling, forest plots, heterogeneity and PRISMA reporting. Topic scouting is /ma-scout.
日本語の概要は準備中です。原文の説明を表示しています。
Use when reviewing someone else's manuscript for a journal, such as after a review invitation or for a revised R1/R2 version. Drafts a structured, constructive review in the journal's format. Never for your own manuscript; that is /self-review.
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Use when one validated cohort analysis must be repeated across many exposure/outcome pairs. Generates one R/Python script per combination from a single methodology template, changing only the variables, and aggregates the results into a summary matrix.
日本語の概要は準備中です。原文の説明を表示しています。
Use when you need a runnable PyTorch training repo for a medical-imaging task (segmentation, classification, detection, synthesis, self-supervised, or fine-tuning a pretrained backbone). Emits a patient-level seed-locked split, train/evaluate scripts, config and a Methods stub.
日本語の概要は準備中です。原文の説明を表示しています。
Use when managing a manuscript project over time. Scaffolds the project structure, tracks writing progress across phases, maintains project memory files, and generates submission checklists and backwards timelines (commands init, status, sync-memory, checklist, timeline).
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Use when a paper needs publication-ready figures or a visual abstract. Makes ROC, forest, calibration, Kaplan-Meier and Bland-Altman plots, CONSORT/STARD/PRISMA flow diagrams, confusion matrices, pipeline diagrams and journal visual abstracts, checking the journal's AI-image policy first.
日本語の概要は準備中です。原文の説明を表示しています。
Use when a manuscript needs a copy-edit for consistency and non-native English clarity. Flags abbreviation, US/UK spelling, en-dash range, P/p, hyphenation, number-style and unit-spacing issues, then polishes style only. AI-tell removal is /humanize.
日本語の概要は準備中です。原文の説明を表示しています。
Renamed to /imaging-data in v6 (removed in v7).
日本語の概要は準備中です。原文の説明を表示しています。
Use when preparing an academic talk such as a journal club, grand rounds, seminar, conference presentation, or lecture/teaching deck. Analyzes the source, drafts audience-adapted speaker scripts, builds or augments the PPTX with speaker notes and prepares Q&A.
日本語の概要は準備中です。原文の説明を表示しています。