「scan」の検索結果

Detect positive (diversifying / episodic / pervasive) selection using codon dN/dS frameworks. Implements PAML codeml site models (M0/M1a/M2a/M7/M8/M8a), branch models, branch-site model A (Zhang 2005), and HyPhy methods (BUSTED, BUSTED-S, BUSTED-MH, BUSTED-PH, MEME, FEL, FUBAR, aBSREL, SLAC, RELAX, GARD, FUBAR-MH). Includes McDonald-Kreitman framework (asymptotic alpha, impMKT, polyDFE, DFE-alpha, GRAPES) for within-species + divergence inference, RERconverge for trait-correlated rate shifts, CSUBST for convergent substitution, and PhyloAcc for accelerated noncoding evolution. Use when testing adaptive evolution at codons, branches, or full gene; running GARD recombination pre-screen; controlling alignment-error and gBGC false positives; reconciling PAML vs HyPhy results; or performing genome-scale selection scans.

日本語の概要は準備中です。原文の説明を表示しています。

Discovers de novo motifs and tests known motif enrichment in ChIP-seq, ATAC-seq, or other peak sequences using HOMER, MEME-ChIP (STREME, CentriMo, TOMTOM, FIMO), monaLisa, and AME. Handles background selection (GC-matched, dinucleotide-shuffled, Markov order-2, peak-flanks), motif databases (JASPAR 2024 CORE PWMs, JASPAR 2026 deep-learning collection, HOCOMOCO v12, HOMER built-in), centrally-enriched motif testing, and differential motif analysis. Use when identifying TF binding motifs in peaks, testing for known TF enrichment, scanning for motif instances, comparing motif content between conditions, or interpreting motifs from deep learning models.

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Assesses RNA-seq data quality specifically for alternative splicing analysis. QC layers include experimental design audit (library prep, read length, depth, replicates), STAR 2-pass cohort-style alignment, junction saturation curves and discovery plateau detection, novel-vs-known junction ratio diagnostics, junction-overhang distribution, splice-site strength scoring (MaxEntScan intrinsic + SpliceAI context-aware), strandedness verification, GENCODE basic vs comprehensive choice, and rRNA contamination screening. Splicing analysis is more demanding than DGE on read length, depth, library prep, alignment strategy, and annotation choice — failures silently bias PSI estimates and inflate novel-junction false positives. Use when evaluating data suitability for splicing analysis, troubleshooting low event detection, or designing sequencing experiments where AS is a primary endpoint.

日本語の概要は準備中です。原文の説明を表示しています。

集群数据管理 Skill —— 涵盖数据使用规范、压缩优化、数据共享（ACL）、文件扫描与清理、文件完整性校验、genozip 基因组压缩等全流程。Use when the user asks about: managing data on the HPC cluster, compressing genomic files (fq/bam/vcf), sharing data between users/groups, scanning for large files or cleaning up disk space, checking file integrity (md5/gzip/bam), using genozip, checking disk quota, or any data lifecycle management task on the NCPGR HPC cluster.

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Find and identify the CBasePlayerController_SetPawn and CBasePlayerController_GetPawn functions in CS2 binary using IDA Pro MCP. Use this skill when reverse engineering CS2 server.dll / libserver.so to locate the pawn-assignment routine by scanning for its distinctive multi-register-push prologue directly (no pre-resolved anchor needed), confirming uniqueness and byte-level match against a known reference signature. Trigger: CBasePlayerController_SetPawn, CBasePlayerController_GetPawn

日本語の概要は準備中です。原文の説明を表示しています。

Find and identify the CBaseEntity_GetChangeAccessorPathInfo_1 virtual function in CS2 binary using IDA Pro MCP. Use this skill when reverse engineering CS2 server.dll or libserver.so to locate the second GetChangeAccessorPathInfo override by scanning CBaseEntity vtable slots near the known CBaseEntity_GetChangeAccessorPathInfo_2 slot for an implementation identical to CBaseEntity_GetChangeAccessorPathInfo_2. Trigger: CBaseEntity_GetChangeAccessorPathInfo_1

日本語の概要は準備中です。原文の説明を表示しています。

Use when the user wants to work with PDF files, including text/table extraction, merging, splitting, rotation, watermarking, creation, form filling, encryption/decryption, image extraction, or OCR for scanned PDFs.

日本語の概要は準備中です。原文の説明を表示しています。

Route a PR review request to the correct tool — code-review plugin (quick parallel scan across all dimensions) or pr-review-toolkit (deep-dive on a specific quality dimension such as type design, error handling, test quality, comments, or simplification). Use when the user asks for a code review, PR review, or mentions a specific quality concern before creating a PR.

日本語の概要は準備中です。原文の説明を表示しています。

AgentShieldを使用してClaude Codeの設定（.claude/ディレクトリ）のセキュリティ脆弱性、設定ミス、インジェクションリスクをスキャン。CLAUDE.md、settings.json、MCPサーバー、フック、エージェント定義をチェック。

Audit and harden a Convex app's authorization: identity-from-arg impersonation, missing per-document ownership checks, public queries leaking data by a client-supplied id, and writes into a parent/container the caller doesn't own. Scans for the 4 shapes, applies requireIdentity/requireOwner, verifies with tsc. TRIGGER on 'secure my app', 'audit auth/authz', 'who can access this data'. SKIP when there is no convex/ directory.

日本語の概要は準備中です。原文の説明を表示しています。

Index-based file discovery using ABOUTME headers. Use INSTEAD of grep or Explore agent when searching for files by purpose or feature. Faster and more accurate than scanning code. Invoke this skill when user asks "which files handle X", "where is Y implemented", or when you need to find files related to a feature or task.

日本語の概要は準備中です。原文の説明を表示しています。

Adds comprehensive accessibility testing to CI/CD pipelines using axe-core Playwright integration or pa11y-ci. Automatically generates markdown reports for pull requests showing WCAG violations with severity levels, affected elements, and remediation guidance. This skill should be used when implementing accessibility CI checks, adding a11y tests to pipelines, generating accessibility reports, enforcing WCAG compliance, automating accessibility scans, or setting up PR accessibility gates. Trigger terms include a11y ci, accessibility pipeline, wcag ci, axe-core ci, pa11y ci, accessibility reports, a11y automation, accessibility gate, compliance check.

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Conduct market research, competitive analysis, investor due diligence, and industry intelligence with source attribution and decision-oriented summaries. Use when the user wants market sizing, competitor comparisons, fund research, technology scans, or research that informs business decisions.

日本語の概要は準備中です。原文の説明を表示しています。

Verification loop for Spring Boot projects: build, static analysis, tests with coverage, security scans, and diff review before release or PR.

日本語の概要は準備中です。原文の説明を表示しています。

Verification loop for Django projects: migrations, linting, tests with coverage, security scans, and deployment readiness checks before release or PR.

日本語の概要は準備中です。原文の説明を表示しています。

Meta-skill que orquestra todos os agentes do ecossistema. Scan automatico de skills, match por capacidades, coordenacao de workflows multi-skill e registry management.

日本語の概要は準備中です。原文の説明を表示しています。

Scan recent git commits for changes that affect user-facing behavior, then draft or update the corresponding documentation pages. Use when docs have fallen behind code changes, after a batch of features lands, or when preparing a release. Trigger keywords - update docs, draft docs, docs from commits, sync docs, catch up docs, doc debt, docs behind, docs drift.

日本語の概要は準備中です。原文の説明を表示しています。

Pre-commit verification pipeline — static security scan, baseline-aware quality gates, independent reviewer subagent, and auto-fix loop. Use after code changes and before committing, pushing, or opening a PR.

日本語の概要は準備中です。原文の説明を表示しています。

Monitor blogs and RSS/Atom feeds for updates using the blogwatcher CLI. Add blogs, scan for new articles, and track what you've read.

日本語の概要は準備中です。原文の説明を表示しています。

Autonomous rule adherence checker. Scans the codebase for rule violations, fixes the highest-impact ones in an isolated worktree, runs full validation, creates a PR. Uses memory to track progress across runs.

日本語の概要は準備中です。原文の説明を表示しています。

AI-assisted pair programming with multiple modes (driver/navigator/switch), real-time verification, quality monitoring, and comprehensive testing. Supports TDD, debugging, refactoring, and learning sessions. Features automatic role switching, continuous code review, security scanning, and performance optimization with truth-score verification.

日本語の概要は準備中です。原文の説明を表示しています。

Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating new PDFs, filling PDF forms, encrypting/decrypting PDFs, extracting images, and OCR on scanned PDFs to make them searchable. If the user mentions a .pdf file or asks to produce one, use this skill.

日本語の概要は準備中です。原文の説明を表示しています。

Fail-closed security auditing for OpenClaw/ClawHub skills & repos: trufflehog secrets scanning, semgrep SAST, prompt-injection/persistence signals, and supply-chain hygiene checks before enabling or installing.

日本語の概要は準備中です。原文の説明を表示しています。

Audit codebases and infrastructure for security issues. Use when scanning dependencies for vulnerabilities, detecting hardcoded secrets, checking OWASP top 10 issues, verifying SSL/TLS, auditing file permissions, or reviewing code for injection and auth flaws.

日本語の概要は準備中です。原文の説明を表示しています。