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概要と使いどころ
Infer and visualize intercellular communication from scRNA-seq with CellChat (R). Build CellChat from Seurat/counts → subset CellChatDB ligand-receptor pairs → over-expressed genes per group → communication probabilities → pathway signaling → network centrality (senders/receivers/influencers) → chord/heatmap/bubble plots → cross-condition compare. Human, mouse. Use liana for pure-Python.
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Query OpenAlex REST API for 250M+ scholarly works, authors, institutions, journals, concepts. Search by keyword, author, DOI, ORCID, or ID; filter by year, OA, citations, field; retrieve citations, references, author disambiguation. Free, no auth. For PubMed use pubmed-database; preprints use biorxiv-database.
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MS data processing with PyOpenMS for LC-MS/MS proteomics and metabolomics — mzML/mzXML I/O, signal processing (smoothing, peak picking, centroiding), feature detection/linking, peptide/protein ID with FDR, untargeted metabolomics. Use matchms for simple spectral matching.
日本語の概要は準備中です。原文の説明を表示しています。
scikit-learn compatible Python toolkit for time series ML: classify, cluster, regress, segment, transform with 30+ algorithms (ROCKET, InceptionTime, KNN-DTW, HIVE-COTE, WEASEL). Handles panel, multivariate, and unequal-length series. Maintained successor to sktime. Alternatives: sktime (larger ecosystem), tslearn (fewer algorithms), catch22 (features only).
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Search the PRIDE Archive v3 REST API for proteomics datasets: discover projects by keyword + faceted filters (organism, instrument, disease, software), fetch project metadata, list and download RAW/PEAK/RESULT/FASTA files (with FTP/Aspera URLs), look up which projects mention a UniProt accession, and find similar projects. PRIDE v3 no longer exposes peptide/PSM-level identification endpoints — for spectrum-level data download the project's RESULT files. Use uniprot-protein-database for protein sequences; interpro-database for domain architecture.
日本語の概要は準備中です。原文の説明を表示しています。
Architecture patterns, design principles, and proven recipes for building robust robotics software. Use this skill when designing robot software architectures, choosing between behavioral frameworks, structuring perception-planning-control pipelines, implementing state machines, designing safety systems, or architecting multi-robot systems. Trigger whenever the user mentions behavior trees, finite state machines, subsumption architecture, sensor fusion, robot safety, watchdogs, heartbeats, graceful degradation, hardware abstraction layers, real-time constraints, or software architecture for robots. Also applies to sim-to-real transfer, digital twins, and robot fleet management.
日本語の概要は準備中です。原文の説明を表示しています。
Foundational software design principles applied specifically to robotics module development. Use this skill when designing robot software modules, structuring codebases, making architecture decisions, reviewing robotics code, or building reusable robotics libraries. Trigger whenever the user mentions SOLID principles for robots, modular robotics software, clean architecture for robots, dependency injection in robotics, interface design for hardware, real-time design constraints, error handling strategies for robots, configuration management, separation of concerns in perception-planning- control, composability of robot behaviors, or any discussion of software craftsmanship in a robotics context. Also trigger for code reviews of robotics code, refactoring robot software, or designing APIs for robotics libraries.
日本語の概要は準備中です。原文の説明を表示しています。
Best practices for Docker-based ROS2 development including multi-stage Dockerfiles, docker-compose for multi-container robotic systems, DDS discovery across containers, GPU passthrough for perception, and dev-vs-deploy container patterns. Use this skill when containerizing ROS2 workspaces, setting up docker-compose for robot software stacks, debugging DDS communication between containers, configuring NVIDIA Container Toolkit for GPU workloads, forwarding X11/Wayland for rviz2 and GUI tools, or managing USB device passthrough for cameras and serial devices. Trigger whenever the user mentions Docker with ROS2, docker-compose for robots, Dockerfile for colcon workspaces, container networking for DDS, devcontainer for ROS2, multi-stage builds for ROS2, or deploying ROS2 in containers. Also trigger for CI/CD with Docker-based ROS2 builds, CycloneDDS or FastDDS configuration in containers, or shared memory in Docker. Covers Humble, Jazzy, and Rolling distributions across Ubuntu 22.04 and 24.04 base images.
日本語の概要は準備中です。原文の説明を表示しています。
Testing strategies, patterns, and tools for robotics software. Use this skill when writing unit tests, integration tests, simulation tests, or hardware-in-the-loop tests for robot systems. Trigger whenever the user mentions testing ROS nodes, pytest with ROS, launch_testing, simulation testing, CI/CD for robotics, test fixtures for sensors, mock hardware, deterministic replay, regression testing for robot behaviors, or validating perception/planning/control pipelines. Also covers property-based testing for kinematics, fuzz testing for message handlers, and golden-file testing for trajectories.
日本語の概要は準備中です。原文の説明を表示しています。
SST v4 (Ion) expert for managing AWS resources as code with the Pulumi-backed framework. Use when writing or editing sst.config.ts, building infra/ modules (sst.aws.Function/Bucket/Dynamo/Cron/Service/Router, sst.Secret, sst.Linkable, raw aws.* Pulumi resources), wiring resource links, scoping IAM, or running sst deploy/dev/diff/remove. Essential when the user mentions SST, sst.config.ts, $config, $transform, $interpolate, sst.aws.*, sst.Secret, Pulumi/Ion, "sst deploy", a failed SST deploy (ConflictException on a resource-type change, "Identifier '__filename' has already been declared", MalformedPolicyDocument on an Output<T>), or wants to scaffold/troubleshoot AWS infrastructure with SST. Also use when a request to "deploy my AWS stack" or "add a Lambda/bucket/table" is made in a repo that already contains an sst.config.ts (using $config) or an sst dependency. Do NOT use when the task is primarily AWS CDK, Terraform, raw CloudFormation, or SAM with no SST present — those have their own tooling.
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Provides AWS CloudFormation patterns for security infrastructure including KMS encryption, Secrets Manager, IAM security, VPC security, ACM certificates, parameter security, outputs, and secure cross-stack references. Use when implementing security best practices, encrypting data, managing secrets, applying least privilege IAM policies, securing VPC configurations, managing TLS/SSL certificates, and implementing defense in depth strategies.
日本語の概要は準備中です。原文の説明を表示しています。
Provides patterns for unit testing REST controllers using MockMvc and @WebMvcTest. Generates controller tests that validates request/response mapping, validation, exception handling, and HTTP status codes. Use when testing web layer endpoints in isolation for API endpoint testing, Spring MVC tests, mock HTTP requests, or controller layer unit tests.
日本語の概要は準備中です。原文の説明を表示しています。
Provides comprehensive code review capability for NestJS applications, analyzing controllers, services, modules, guards, interceptors, pipes, dependency injection, and database integration patterns. Use when reviewing NestJS code changes, before merging pull requests, after implementing new features, or for architecture validation. Triggers on "review NestJS code", "NestJS code review", "check my NestJS controller/service".
日本語の概要は準備中です。原文の説明を表示しています。
Provides patterns and code examples for building Next.js 16+ applications with App Router architecture. Use when creating projects with App Router, implementing Server Components and Client Components ("use client"), creating Server Actions for forms, building Route Handlers (route.ts), configuring caching with "use cache" directive (cacheLife, cacheTag), setting up parallel routes (`@slot`) or intercepting routes, migrating to proxy.ts, or working with App Router file conventions (layout.tsx, page.tsx, loading.tsx, error.tsx).
日本語の概要は準備中です。原文の説明を表示しています。
Provides patterns for unit testing service layer with Mockito. Creates isolated tests that mock repository calls, verify method invocations, test exception scenarios, and stub external API responses. Use when testing service behaviors and business logic without database or external services.
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Work with fonts in the Shift font editor. Use for questions about the font, glyph, source, selection, or view open in the running Shift app (through its local MCP server), for reading, authoring, or compiling saved .shift documents and other font files with shift-cli, and for font concepts such as contours, components, masters, and variable fonts.
日本語の概要は準備中です。原文の説明を表示しています。
Canonical rules for finding, creating, and updating Shift GitHub issues. Use whenever the user asks to file, create, open, update, triage, or search for an issue, or when substantial work needs an issue before a pull request. Prevents duplicates and defines acceptance criteria and pull-request closure semantics.
日本語の概要は準備中です。原文の説明を表示しています。
Use after completing an analysis or before reporting a finding, to have a skeptical reviewer attack the conclusion before you believe it
日本語の概要は準備中です。原文の説明を表示しています。
Generative design for construction: text-to-BIM concepts, option generation, and AI-assisted design iteration with cost and carbon feedback. Use when exploring early design options with AI.
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Create game-ready fixed-cell pixel-art character spritesheets from text concepts, reference images, or existing character art. Use when Codex needs to design, generate, clean up, validate, and package 2D game characters with native 32x32, 64x64, or 128x128 cells; 4-way or 8-way directions; idle, walk/run, jump, attack, archer, caster, or other animation strips; transparent GIF/WebP previews; and per-direction targeted regeneration.
日本語の概要は準備中です。原文の説明を表示しています。
Pulls financial statement numbers for US public companies straight from SEC EDGAR's free official XBRL APIs (companyfacts, companyconcept, frames, submissions) into a cited table. Every value carries its accession number, form, fiscal period, filed date, XBRL tag and a link to the filing, and the tool handles fiscal-year ends, quarterly vs YTD vs TTM, derived Q4, restatements and units. Use this whenever the user wants 10-K numbers or 10-Q numbers, says "pull financials for", asks for public company revenue, net income, EPS, cash, debt or capex, wants comps or a competitor side-by-side, a credit check, prospect research, or model inputs, or mentions SEC filings or EDGAR, even if they never say XBRL. Free and primary-source, no paid data terminal needed. Do not use it for private companies, stock prices or valuation multiples.
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Turn a marketing brief or product offer into a finished short-form video ad built in HyperFrames — hook, script, shot-by-shot storyboard, scene-by-scene HTML composition, captions, and voiceover. Outputs platform cuts (vertical 9:16, square, 16:9). Use when you need a launch ad, product promo, social video, or paid-creative concept ready to render.
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Generates customized client onboarding checklists with phased tasks, ownership assignments, dependencies, acceptance criteria, and email templates. Adapts to consulting, SaaS, or agency engagement models.
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Turn a process walkthrough -- meeting transcript, screen-recording transcript, rough notes, or a folder of scattered how-to docs -- into a clean standard operating procedure: numbered steps, roles, decision points, exceptions, and a consistent template across your whole SOP library.
日本語の概要は準備中です。原文の説明を表示しています。