4,163 件 ・ 関連度順
概要と使いどころ
Design reproducible evaluations for AI agents with representative task sets, explicit rubrics, appropriate graders, baselines, regression gates, and failure analysis. Use when defining agent quality, comparing prompts or models, validating a release, measuring tool-use reliability, investigating regressions, or deciding whether an agent is ready for production.
日本語の概要は準備中です。原文の説明を表示しています。
Design privacy-aware observability for AI agents using traces, spans, structured events, metrics, cost attribution, dashboards, alerts, and investigation workflows. Use when instrumenting an agent, debugging intermittent tool or model failures, defining service-level objectives, analyzing latency or spend, auditing agent decisions, or preparing production monitoring.
日本語の概要は準備中です。原文の説明を表示しています。
Create, execute, and roll back versioned database schema migrations using tools like Alembic, Prisma Migrate, Flyway, and Knex. Use when the user requests database migration or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Set up and manage data labeling workflows using manual annotation tools, semi-automated pipelines, active learning, and programmatic weak supervision. Use when the user requests data labeling or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Deploy trained machine learning models as production-ready services using REST APIs, containers, serverless functions, and orchestration platforms. Use when the user requests model deployment or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Optimize machine learning model hyperparameters using grid search, random search, Bayesian optimization, and Hyperband to maximize model performance within a compute budget. Use when the user requests hyperparameter tuning or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Integrate with external APIs using REST clients, webhook consumers, SDK wrappers, and polling patterns with proper authentication, error handling, and retry logic. Use when the user requests api integration or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Design GraphQL APIs with well-structured schemas, efficient resolvers, pagination, and performance patterns like DataLoader and federation. Use when the user requests graphql api design or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Implement OAuth 2.0 authentication flows including authorization code with PKCE, client credentials, and device code for secure API integration. Use when the user requests oauth 2 0 setup or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Automatically generate clear, comprehensive documentation for codebases — including API references, inline docstrings, README files, and usage guides. Use when the user requests code documentation or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Improve code quality and maintainability through systematic identification of code smells and application of proven refactoring patterns. Use when the user requests refactoring or provides relevant inputs for this workflow.
日本語の概要は準備中です。原文の説明を表示しています。
Analyzes cfDNA fragment size distributions and fragmentomics features using FinaleToolkit or Griffin. Extracts nucleosome positioning patterns, fragment ratios, and DELFI-style fragmentation profiles for cancer detection. Use when leveraging fragment patterns for tumor detection or tissue-of-origin analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Predict protein-coding genes in eukaryotic genomes using BRAKER3 for combined RNA-seq and protein evidence, or GALBA for protein-only evidence. Runs Augustus with trained parameters for accurate gene models. Use when annotating a newly assembled eukaryotic genome or improving existing gene predictions.
日本語の概要は準備中です。原文の説明を表示しています。
Predict enhancer-gene regulatory connections from ATAC-seq using ABC, ENCODE-rE2G, HiChIP, or Cicero. Use when linking distal enhancers to target genes, choosing between contact-aware (ABC, ENCODE-rE2G), accessibility-only (Cicero), and orthogonal (HiChIP H3K27ac, EpiMap) approaches, validating predictions against CRISPRi-FlowFISH gold-standard, or building cell-type-specific regulatory maps for fine-mapping or therapeutic target discovery.
日本語の概要は準備中です。原文の説明を表示しています。
Find cross-database references between NCBI databases using Biopython Bio.Entrez (ELink). Use when navigating gene to protein/structure, sequence to publication, PubMed to GEO, BioProject to SRA runs, or discovering all link relationships for a record. Covers linkname semantics, cmd= variants, asymmetric link warnings, neighbor_history for >200 input IDs, and per-database link tables.
日本語の概要は準備中です。原文の説明を表示しています。
Processes environmental DNA metabarcoding data from raw amplicon reads to species occurrence tables using OBITools3, DADA2, and taxonomic assignment against BOLD, MIDORI2, or MitoFish databases. Handles COI, 12S, rbcL, and ITS barcode regions with primer removal, denoising, chimera detection, and contamination filtering via decontam. Includes occupancy modeling (occumb) for detection probability correction. Use when analyzing eDNA from water, soil, or bulk samples for biodiversity monitoring. Not for 16S human microbiome (see microbiome/amplicon-processing).
日本語の概要は準備中です。原文の説明を表示しています。
Comprehensive variant filtering including GATK VQSR, hard filters, bcftools expressions, and quality metric interpretation for SNPs and indels. Use when filtering variants using GATK best practices.
日本語の概要は準備中です。原文の説明を表示しています。
Detect transcription factor binding footprints in ATAC-seq using TOBIAS, HINT-ATAC, Wellington, or scprinter. Use when identifying bound TF sites within accessible regions, correcting Tn5 insertion bias before footprinting, choosing between cleavage-based and aggregate-based footprinters, or comparing differential TF activity between conditions.
日本語の概要は準備中です。原文の説明を表示しています。
Filter and select sequences by criteria (length, ID, GC content, patterns) using Biopython. Use when subsetting sequences, removing unwanted records, or selecting by specific criteria.
日本語の概要は準備中です。原文の説明を表示しています。
Read and manipulate Flow Cytometry Standard (FCS) files. Covers loading data, accessing parameters, and basic data exploration. Use when loading and inspecting flow or mass cytometry data before preprocessing.
日本語の概要は準備中です。原文の説明を表示しています。
Detect and remove doublets from flow and mass cytometry data. Covers FSC/SSC gating and computational doublet detection methods. Use when filtering out cell aggregates before clustering or quantitative analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Analyzes CRISPR drug-modifier (chemogenomic) screens with drugZ (Li & Hart 2019 Genome Med), a bidirectional Z-score method that identifies synthetic-lethal sensitizing genes and resistance-conferring suppressor genes from vehicle vs drug comparisons. Covers vehicle-anchored design (not Day-0), the bidirectional Z math giving 2-3x sensitivity over MAGeCK / STARS / edgeR / RIGER on drug screens, per-gene sumZ and normZ, synth (sensitizer) vs supp (suppressor) FDR, multi-dose handling, integration with control sgRNAs, and comparison with MAGeCK MLE with dose covariate. Use when running a drug-modifier CRISPR screen, identifying sensitizing or resistance genes for a drug candidate, choosing drugZ vs MAGeCK MLE for chemogenomic analysis, troubleshooting low-effect drug screens where MAGeCK lacks sensitivity, or designing a drug-screen layout (vehicle vs drug arms).
日本語の概要は準備中です。原文の説明を表示しています。
Perform differential expression analysis using edgeR in R/Bioconductor. Use for analyzing RNA-seq count data with the quasi-likelihood F-test framework, creating DGEList objects, normalization, dispersion estimation, and statistical testing. Use when performing DE analysis with edgeR.
日本語の概要は準備中です。原文の説明を表示しています。