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Write `output/DRAFT.md` (or `output/SNAPSHOT.md`) from an approved outline and evidence packs, using only verified citation keys from `citations/ref.bib`.

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Audit one research Workspace for declared Unit outputs and Pipeline target Artifacts, writing `output/CONTRACT_REPORT.md`; use for mid-Run coverage snapshots or final delivery completeness, not deep provenance integrity.

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Own MSBuild generated-artifact integration. USE FOR: a target that creates or should create source, Content, None, or another physical file but the artifact is missing from compilation or output; target timing; evaluation-time glob misses; $(IntermediateOutputPath) placement; and FileWrites clean tracking. The prompt may describe the generated artifact without naming the producing task. DO NOT USE when the primary defect is general Include/Remove/Update semantics, item metadata or batching, duplicate/overlapping declarations, or a generated-item identity relationship; use item-management. Exclude Roslyn source-generator internals and non-MSBuild systems.

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Canonical patterns for writing custom MSBuild targets. USE FOR: diagnosing and fixing custom target authoring anti-patterns; broken SDK target chains across files (e.g., Directory.Build.targets silently redefining SDK targets); targets that replace CompileDependsOn instead of extending it with $(CompileDependsOn); query targets returning stale results from Outputs vs Returns misuse; missing Inputs/Outputs causing unnecessary rebuilds; missing FileWrites registration. Covers DependsOnTargets vs BeforeTargets vs AfterTargets, the Build→CoreBuild three-level pattern, and the $(XxxDependsOn) chain-extension pattern. DO NOT USE FOR: incremental build tuning (use incremental-build), parallelization (use build-parallelism), general anti-patterns (use msbuild-antipatterns), non-MSBuild build systems.

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Establish MSBuild/.NET build performance baselines before optimizing. USE FOR: a .NET build or solution that is slow or has build-performance concerns; cold, warm, incremental, or no-op measurements; before/after comparisons; CI build output caching; static graph build decisions; artifacts output; and dependency graph trimming. Start here before build-perf-diagnostics, incremental-build, or build-parallelism. DO NOT USE for webpack, npm, JavaScript bundlers, or other non-MSBuild build systems. For detailed target/task/analyzer bottleneck analysis after baselining, use build-perf-diagnostics.

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Use HTMLHint in .NET repositories that ship static HTML output or standalone frontend templates. USE FOR: static HTML files; generated frontend output; standalone templates under wwwroot, dist, or other web folders; HTML structure checks. DO NOT USE FOR: raw .cshtml or .razor source with server-side directives; JavaScript or TypeScript linting. INVOKES: inspect the repository context, edit targeted files, and run relevant build, test, lint, or validation commands when changes are made.

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漫剧制作总导演。接受用户故事创意，依次完成剧本创作、角色设计、分镜图生成、分镜视频生成、视频合成全流程，产物保存到 COMIC_DRAMA_OUTPUT_DIR（默认 ./output），最终交付完整漫剧视频和 TOS 链接。

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Decision protocol for wiring a verify-then-fix loop around a code-editing LLM agent. The agent edits → runs lint/test → reads the output → fixes → re-runs, bounded by an iteration cap and an escalation rule. Activates whenever a coder agent has a verifiable success criterion (exit code, type-checker output, failing assertion) and the user wants the agent to converge to "green" on its own. Framework-agnostic — wraps Aider's `--auto-lint`/`--auto-test`, an OpenHands SWE-Bench loop, a manual LangGraph cycle, or Claude Code's bash tool just the same.

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Enhancement-overlay decision protocol for STREAMING the output of long-running LLM / agent runs from the *backend*, not just wiring a typing animation in the UI. Activates when a coder agent must stream final tokens to a chat client, surface intermediate agent steps (which tool, which node, partial reasoning), emit custom tool-progress events, choose a transport (SSE vs WebSocket), or decide what to do when the client disconnects mid-stream. The langchain / langgraph skills mention stream modes but stop at "you can stream"; this skill encodes *what to stream, over what transport, and how to fail safely*.

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Backend-neutral image generation: create new raster images and looping GIF/WebP animations through the local one-file image-use CLI (formerly chatgpt-imagegen), using the user's ChatGPT subscription by default, the Codex backend as fallback, or an optional Gemini subscription — no API key or daemon. Triggers: image generation, generate an image, draw a picture, 画图, 画一张, 生成图片, 生图, 配图. Use for photos, illustrations, icons, hero banners, mockups, sprites, concept art, animation loops, and figures for documents, proposals, blog posts, or READMEs; save outputs in the workspace. Auto mode uses the logged-in ChatGPT browser via chrome-use. Gemini users can pass --backend gemini or agy. Proactively propose useful figures while authoring long-form content. Do not use for editing existing images, SVG/vector work, code-native graphics, established icon systems, explicit high-quality or transparent API output, or end-user image-generation services.

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Counts RNA-seq reads overlapping GTF gene features. Takes sorted STAR BAMs plus GTF; outputs a per-gene tab-delimited matrix across samples. Handles strandedness (0/1/2), paired-end, multi-sample batch counting in one command, and outputs assignment statistics. Use Salmon for alignment-free quantification; use featureCounts when STAR BAMs already exist.

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Use this skill for AlphaFold 3 input preparation, prediction command planning, output interpretation, and Python API inspection. Covers the local AlphaFold 3 inference package, its JSON dialect, run_alphafold workflow, outputs, troubleshooting, and safe helper scripts.

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MCP server attack hunting - tool poisoning, indirect prompt injection via tool output, rug-pull updates, cross-tool shadowing, over-permissioned/excessive-agency tools, lethal trifecta. Wiki-first, FIND schema output.

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LLM / AI application attack hunting - prompt injection (direct + indirect), excessive agency, insecure output handling, system-prompt + data leakage. OWASP LLM Top 10. Wiki-first, FIND schema output.

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Synthesize raw recon/test output into engagement state. Reads everything dropped in targets/<active>/ingest/, extracts hosts/assets/creds/paths, merges into state.md/loot.md/Killchain.md, logs it, archives the raw files. Works for pentest, bugbounty, and ctf. Use when asked to "ingest", "synthesize findings", "process recon", or after dropping tool output in the ingest folder.

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Translate natural-language requirements or structured specification documents into formal temporal logic properties (LTL, CTL, safety/liveness properties). Use when users need to formalize requirements for model checking, formal verification, or property specification. Handles embedded/real-time systems, hardware verification, concurrent systems, and reactive systems. Resolves ambiguities, asks clarifying questions when needed, and outputs machine-checkable formulas with explanations. Supports multiple output formats (SPIN, NuSMV, Uppaal, TLA+, Maude).

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Compare behavior across multiple versions of programs or repositories. Use when you need to analyze how functionality changes between versions, identify regressions, compare outputs and exceptions, or validate upgrades. The skill compares execution behavior, test results, outputs, exceptions, and observable states across versions, generating detailed reports showing behavioral divergences, potential regressions, added/removed functionality, and areas requiring validation. Supports multiple programming languages and can work with test suites or execution traces.

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Turn vague or partially formed AI, computer-science, data-driven, and engineering-method research directions into evidence-grounded, falsifiable, paper-ready Research Idea Briefs through heuristic questioning, staged confirmation, literature positioning, novelty attack, and method-figure planning. Use when the user needs to clarify a research idea, formalize inputs/outputs/objectives/constraints, frame background and motivation, select 3-5 anchor papers, identify a defensible gap, derive 2-3 contributions, stress-test novelty, or design an input-to-output method framework and core-paper figure. Also trigger on requests such as 明确科研 idea、启发式梳理 idea、互动追问科研问题、梳理论文创新点、定义研究任务、找对标论文、把研究方向变成论文方案、画方法框架图. Do not use as the primary workflow for running experiments, exhaustive systematic reviews, drafting full manuscript sections, or polishing finished prose.

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Threads Content Specialist. Writes Threads-native posts — short, direct, opinion-led, made for conversation. Strictly enforces the 500 character limit with a count on every post. Supports standalone posts and threads (connected posts). Reads brand-style.md and content-calendar.md. Flags infographic opportunities for /publisher. Output to outputs/threads/.

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LinkedIn Content Specialist. Writes LinkedIn-native posts for SMB clients — first-person, professional-but-human, built for LinkedIn's format and algorithm. Not adapted captions: posts written from first principles for the platform. Reads brand-style.md and content-calendar.md. Flags posts that would benefit from a Blotato infographic. Output to outputs/linkedin/.

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X/Twitter Content Specialist. Writes X-native posts — hooks, threads, and standalone tweets optimised for the platform. Strictly enforces the 280 character limit with a count on every post. Supports standalone tweets and X threads (1/ format). Reads brand-style.md and content-calendar.md. Optional X trend research via Tasty Content MCP. Output to outputs/x/.

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Generate persistent, explorable 3D worlds/environments with Marble by World Labs — from text, a single image, multiple images, video, or a 360 panorama, plus coarse-structure blocking with Chisel. Use this skill when a task needs a navigable 3D scene, VR/immersive backdrop, virtual-production environment, previz set, game-blockout, or web/engine-ready Gaussian splat or mesh, and you must choose an input mode, a Marble model, an export format, and a plan/API route, then review world quality. Covers the Marble web app and the World API, editing/expansion, output formats and what each supports downstream, import into Unity/Unreal/Blender/Houdini/web, pricing/credits, capability limits, and rights/licensing. Not for flat text-to-image, text-to-video clips, or real-time on-the-fly world models (Marble outputs are downloadable, static 3D environments).

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Species abundance estimation using Bracken with Kraken2 output. Redistributes reads from higher taxonomic levels to species for more accurate estimates. Use when accurate species-level abundances are needed from Kraken2 classification output.

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Generate AI-friendly repository documentation with the SourceSage CLI. Use when Codex needs to run `sage` or `sourcesage` to create `.SourceSageAssets/Repository_summary.md`, analyze the current repository or another local repository, switch the output language between English and Japanese, use `--lite` to keep the summary small, change the output directory, or optionally create a deprecated tag-diff release report with `--diff`.

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