abinit
無料Generate and manage ABINIT DFT calculations. Use when the user requests ABINIT, or needs DFPT phonons, GW calculations, or BSE optical spectra.
日本語の概要は準備中です。原文の説明を表示しています。
CP2K single point energy calculation. Uses GTH pseudopotentials, Gaussian-plane-wave (GPW) method, and DZVP basis sets for periodic DFT.
日本語の概要は準備中です。原文の説明を表示しています。
実行スコア 未検証
インストール方法を見るインストールする前に、エージェントに与えられる指示の中身を確認できます。
Use this skill when the user wants to:
CP2K uses the Gaussian and Plane Waves (GPW) method, which is efficient for large periodic systems (100+ atoms). For molecular systems, prefer ORCA.
| Parameter | Default | Description |
|---|---|---|
software | "cp2k" | Must be set to "cp2k" |
cp2k_functional | "PBE" | XC functional |
cp2k_basis | "DZVP-MOLOPT-SR-GTH" | Gaussian basis set |
cp2k_pseudo | "GTH-PBE" | Pseudopotential family |
cp2k_cutoff | 400 | Plane-wave cutoff in Ry |
cp2k_rel_cutoff | 60 | Relative cutoff in Ry |
kpoints | [1, 1, 1] | Gamma-point by default |
First, check the loaded structure:
catgo_view(action: "get_state")
Create workflow and add single point task:
catgo_workflow_v2(action: "create", params: {
name: "TiO2 rutile single point"
})
catgo_workflow_v2(action: "add_task", params: {
workflow_id: "<wf_id>",
task_type: "single_point",
params: {
software: "cp2k",
cp2k_functional: "PBE",
cp2k_basis: "DZVP-MOLOPT-SR-GTH",
cp2k_pseudo: "GTH-PBE",
cp2k_cutoff: 400
}
})
catgo_workflow_v2(action: "add_task", params: {
workflow_id: "<wf_id>",
task_type: "single_point",
params: {
software: "cp2k",
cp2k_functional: "PBE",
cp2k_basis: "DZVP-MOLOPT-SR-GTH",
cp2k_pseudo: "GTH-PBE",
cp2k_cutoff: 500,
kpoints: [4, 4, 4]
}
})
For systems where standard DFT fails (e.g., NiO, FeO, MnO):
catgo_workflow_v2(action: "add_task", params: {
workflow_id: "<wf_id>",
task_type: "single_point",
params: {
software: "cp2k",
cp2k_functional: "PBE",
cp2k_basis: "DZVP-MOLOPT-SR-GTH",
cp2k_pseudo: "GTH-PBE",
cp2k_cutoff: 500,
cp2k_dft_plus_u: true,
cp2k_u_values: {"Ni": 6.4, "Fe": 4.0}
}
})
More accurate but significantly more expensive:
catgo_workflow_v2(action: "add_task", params: {
workflow_id: "<wf_id>",
task_type: "single_point",
params: {
software: "cp2k",
cp2k_functional: "HSE06",
cp2k_basis: "DZVP-MOLOPT-SR-GTH",
cp2k_pseudo: "GTH-PBE",
cp2k_cutoff: 500,
cp2k_hfx_cutoff_radius: 6.0
}
})
catgo_workflow_v2(action: "submit", params: { workflow_id: "<wf_id>" })
catgo_workflow_v2(action: "status", params: { workflow_id: "<wf_id>" })
catgo_workflow_v2(action: "get_result", params: {
workflow_id: "<wf_id>",
task_id: "<task_id>"
})
CP2K uses Goedecker-Teter-Hutter (GTH) pseudopotentials. The pseudopotential family MUST match the functional:
| Functional | Pseudopotential |
|---|---|
| PBE | GTH-PBE |
| BLYP | GTH-BLYP |
| PBE0, HSE06 | GTH-PBE (same PP for hybrids) |
| SCAN | GTH-SCAN (if available, else GTH-PBE) |
| Basis | Quality | Atoms | Use |
|---|---|---|---|
| SZV-MOLOPT-SR-GTH | Single-zeta | All | Quick test only |
| DZVP-MOLOPT-SR-GTH | Double-zeta | All | Production default |
| TZVP-MOLOPT-SR-GTH | Triple-zeta | Most | Accurate energetics |
| TZV2P-MOLOPT-SR-GTH | Triple-zeta+2pol | Main group | Benchmark |
The -SR- (short range) variants are optimized for condensed phase and are
preferred for periodic calculations. -GTH suffix means they match GTH
pseudopotentials.
The plane-wave cutoff (cp2k_cutoff) controls the electron density grid. Test
convergence by running multiple single points:
catgo_workflow_v2(action: "add_task", params: {
workflow_id: "<wf_id>",
task_type: "single_point",
task_id: "cut300",
params: { software: "cp2k", cp2k_cutoff: 300 }
})
Repeat for 400, 500, 600 Ry. Energy should converge to within 1 meV/atom.
Typical converged values:
cp2k_spin_polarized: true)まだレビューはありません。使ってみた感想をお寄せください。
ログインなしで書き込めます。使ってみた感想、質問、動かなかった環境などを気軽にどうぞ。
まだコメントはありません。最初のコメントを書いてみませんか。
Generate and manage ABINIT DFT calculations. Use when the user requests ABINIT, or needs DFPT phonons, GW calculations, or BSE optical spectra.
日本語の概要は準備中です。原文の説明を表示しています。
Use when the user asks to place an adsorbate molecule on a surface, find adsorption sites, or set up a surface+adsorbate model for DFT.
日本語の概要は準備中です。原文の説明を表示しています。
Use when the user asks for adsorption energy, binding energy, or wants to compare how strongly a molecule binds to a surface.
日本語の概要は準備中です。原文の説明を表示しています。
Use when the user asks to analyze computational results: Gibbs free energy, OER/HER/CO2RR overpotentials, adsorption energy, convergence tests, DOS/d-band analysis, or Bader charge analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Use AmberTools antechamber for molecular force field parameterization. Generates GAFF/GAFF2 parameters and AM1-BCC or RESP charges for use in AMBER or LAMMPS classical MD simulations.
日本語の概要は準備中です。原文の説明を表示しています。
One-shot recipes for adding, deleting, moving, and replacing individual atoms in the active CatGo viewer structure. Use whenever the user asks to "add an atom", "delete atoms", "remove this atom", "move atom N", "replace H with Li", or any single-atom edit — including "add a hydrogen on top of atom 12" / "delete atoms 5–9" / "swap the oxygen at site 3 for fluorine". Skips the discovery loop (no need to list structure tools or check adsorption sites first); goes straight to the matching `catgo_structure` action. Triggers in Chinese on 加原子, 删原子, 减原子, 移动原子, 替换原子, 增加氢, 删除氧, 把 ... 换成 ....
日本語の概要は準備中です。原文の説明を表示しています。