本文へ移動
cccskills
無料GitHub で公開

adaptyv

Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.

インストール方法を見る

含まれるファイル(2)

  • SKILL.md3.6 KB
  • metadata.json1005 B

SKILL.md(原文)

インストールする前に、エージェントに与えられる指示の中身を確認できます。

Adaptyv

Adaptyv is a cloud laboratory platform that provides automated protein testing and validation services. Submit protein sequences via API or web interface and receive experimental results in approximately 21 days.

Quick Start

Authentication Setup

Adaptyv requires API authentication. Set up your credentials:

  1. Contact support@adaptyvbio.com to request API access (platform is in alpha/beta)
  2. Receive your API access token
  3. Set environment variable:
export ADAPTYV_API_KEY="your_api_key_here"

Or create a .env file:

ADAPTYV_API_KEY=your_api_key_here

Installation

Install the required package using uv:

uv pip install requests python-dotenv

Basic Usage

Submit protein sequences for testing:

import os
import requests
from dotenv import load_dotenv

load_dotenv()

api_key = os.getenv("ADAPTYV_API_KEY")
base_url = "https://kq5jp7qj7wdqklhsxmovkzn4l40obksv.lambda-url.eu-central-1.on.aws"

headers = {
    "Authorization": f"Bearer {api_key}",
    "Content-Type": "application/json"
}

# Submit experiment
response = requests.post(
    f"{base_url}/experiments",
    headers=headers,
    json={
        "sequences": ">protein1\nMKVLWALLGLLGAA...",
        "experiment_type": "binding",
        "webhook_url": "https://your-webhook.com/callback"
    }
)

experiment_id = response.json()["experiment_id"]

Available Experiment Types

Adaptyv supports multiple assay types:

  • Binding assays - Test protein-target interactions using biolayer interferometry
  • Expression testing - Measure protein expression levels
  • Thermostability - Characterize protein thermal stability
  • Enzyme activity - Assess enzymatic function

See reference/experiments.md for detailed information on each experiment type and workflows.

Protein Sequence Optimization

Before submitting sequences, optimize them for better expression and stability:

Common issues to address:

  • Unpaired cysteines that create unwanted disulfides
  • Excessive hydrophobic regions causing aggregation
  • Poor solubility predictions

Recommended tools:

  • NetSolP / SoluProt - Initial solubility filtering
  • SolubleMPNN - Sequence redesign for improved solubility
  • ESM - Sequence likelihood scoring
  • ipTM - Interface stability assessment
  • pSAE - Hydrophobic exposure quantification

See reference/protein_optimization.md for detailed optimization workflows and tool usage.

API Reference

For complete API documentation including all endpoints, request/response formats, and authentication details, see reference/api_reference.md.

Examples

For concrete code examples covering common use cases (experiment submission, status tracking, result retrieval, batch processing), see reference/examples.md.

Important Notes

  • Platform is currently in alpha/beta phase with features subject to change
  • Not all platform features are available via API yet
  • Results typically delivered in ~21 days
  • Contact support@adaptyvbio.com for access requests or questions
  • Suitable for high-throughput AI-driven protein design workflows

レビュー

まだレビューはありません。使ってみた感想をお寄せください。

同じリポジトリのスキル

概要と使いどころ

Testing patterns for PHPUnit and Playwright E2E tests. Use when writing tests, debugging test failures, setting up test coverage, or implementing test patterns for ActivityPub features.

日本語の概要は準備中です。原文の説明を表示しています。

Microck/ordinary-claude-skills4052026年9月7日 更新

Add unsigned integer (uint) type support to PyTorch operators by updating AT_DISPATCH macros. Use when adding support for uint16, uint32, uint64 types to operators, kernels, or when user mentions enabling unsigned types, barebones unsigned types, or uint support.

日本語の概要は準備中です。原文の説明を表示しています。

Microck/ordinary-claude-skills4052026年9月7日 更新

This skill should be used when the user asks to "create an agent", "add an agent", "write a subagent", "agent frontmatter", "when to use description", "agent examples", "agent tools", "agent colors", "autonomous agent", or needs guidance on agent structure, system prompts, triggering conditions, or agent development best practices for Claude Code plugins.

日本語の概要は準備中です。原文の説明を表示しています。

Microck/ordinary-claude-skills4052026年9月7日 更新

Master advanced AgentDB features including QUIC synchronization, multi-database management, custom distance metrics, hybrid search, and distributed systems integration. Use when building distributed AI systems, multi-agent coordination, or advanced vector search applications.

日本語の概要は準備中です。原文の説明を表示しています。

Microck/ordinary-claude-skills4052026年9月7日 更新

Create and train AI learning plugins with AgentDB's 9 reinforcement learning algorithms. Includes Decision Transformer, Q-Learning, SARSA, Actor-Critic, and more. Use when building self-learning agents, implementing RL, or optimizing agent behavior through experience.

日本語の概要は準備中です。原文の説明を表示しています。

Microck/ordinary-claude-skills4052026年9月7日 更新

Implement persistent memory patterns for AI agents using AgentDB. Includes session memory, long-term storage, pattern learning, and context management. Use when building stateful agents, chat systems, or intelligent assistants.

日本語の概要は準備中です。原文の説明を表示しています。

Microck/ordinary-claude-skills4052026年9月7日 更新

Microck のスキルをすべて見る

このスキルの問題を報告する