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neo4j-spark-skill

Use when reading from or writing to Neo4j with Apache Spark or Databricks using the Neo4j Connector for Apache Spark 6.0 (org.neo4j.connectors:spark) or 5.x (org.neo4j:neo4j-connector-apache-spark). Covers SparkSession setup, DataFrame reads via labels/Cypher/relationship scan, DataFrame writes with SaveMode, node.keys for MERGE, relationship write mapping, partition and batch tuning, PySpark and Scala examples, Databricks cluster config, Databricks secrets for credentials, Delta Lake to Neo4j pipelines. Does NOT handle Cypher authoring — use neo4j-cypher-skill. Does NOT handle the Python bolt driver — use neo4j-driver-python-skill. Does NOT handle GDS algorithms — use neo4j-gds-skill.

インストール方法を見る

含まれるファイル(4)

  • SKILL.md15.9 KB
  • README.md1.5 KB
  • references/read-patterns.md3.4 KB
  • references/write-patterns.md6.7 KB

SKILL.md(原文)

インストールする前に、エージェントに与えられる指示の中身を確認できます。

Neo4j Connector for Apache Spark

When to Use

  • Reading Neo4j nodes/relationships into Spark DataFrames
  • Writing Spark DataFrames to Neo4j as nodes or relationships
  • Databricks notebooks connecting to Neo4j
  • Delta Lake → Neo4j ingestion pipelines
  • Partitioned parallel reads from large Neo4j graphs

When NOT to Use

  • Python bolt driver / execute_query → neo4j-driver-python-skill
  • Cypher query writing → neo4j-cypher-skill
  • GDS graph algorithms → neo4j-gds-skill
  • Spring Boot + Neo4j → neo4j-spring-data-skill

Version Matrix

ConnectorSparkScalaJavaDatabricks RuntimeNeo4jMaven coordinate
6.0.x4.0, 4.12.1317+17.3 LTS5.x, 2025.x, 2026.xorg.neo4j.connectors:spark:6.0.0-s_2.13
5.5.x / 5.4.x3.4, 3.52.12, 2.138+14.3–16.4 LTS4.4, 5.x, 2025.x, 2026.xorg.neo4j:neo4j-connector-apache-spark_2.13:5.5.0_for_spark_3

Group ID changed in 6.0 — org.neo4j:neo4j-connector-apache-spark_<scala> is now a relocation POM pointing at org.neo4j.connectors:spark. On Spark 3.x stay on 5.5.x.

6.0 breaking changes

ChangeMigration
Spark baseline 3.5 → 4.0/4.1; Scala 2.12 and Java 8–11 droppedUpgrade to 5.5.0 first, then Spark 4.x + Scala 2.13 + Java 17
Maven coordinate org.neo4j.connectors:spark:<version>-s_2.13Replace old _for_spark_3 coordinate
schema.optimization.type removedschema.optimization.node.keys, schema.optimization.relationship.keys, schema.optimization
$stream.offset in partitioned reads removedUse partitions + query.count
;-separated multi-statement script removedscript.1, script.2, … script.N — executed in numbered order
relationship.save.strategy default native → keysSet .option("relationship.save.strategy", "native") explicitly to keep old behaviour
query option rewritten for Data Source V2 predicate push-downNo action; verify plans on upgrade

Setup

Standalone Spark (PySpark)

from pyspark.sql import SparkSession

spark = (SparkSession.builder
    .appName("neo4j-app")
    .config("spark.jars.packages",
            "org.neo4j.connectors:spark:6.0.0-s_2.13")   # Spark 3.x: org.neo4j:neo4j-connector-apache-spark_2.13:5.5.0_for_spark_3
    .config("neo4j.url", "neo4j+s://xxxx.databases.neo4j.io")
    .config("neo4j.authentication.type", "basic")
    .config("neo4j.authentication.basic.username", "neo4j")
    .config("neo4j.authentication.basic.password", "password")
    .getOrCreate())

Standalone Spark (Scala)

val spark = SparkSession.builder
  .appName("neo4j-app")
  .config("spark.jars.packages",
    "org.neo4j.connectors:spark:6.0.0-s_2.13")
  .config("neo4j.url", "neo4j+s://xxxx.databases.neo4j.io")
  .config("neo4j.authentication.type", "basic")
  .config("neo4j.authentication.basic.username", "neo4j")
  .config("neo4j.authentication.basic.password", "password")
  .getOrCreate()

Databricks — Cluster Installation

  1. Cluster → Libraries → Install New → Maven
  2. Coordinate org.neo4j.connectors:spark:6.0.0-s_2.13 on DBR 17.3 LTS; org.neo4j:neo4j-connector-apache-spark_2.13:5.5.0_for_spark_3 on DBR 14.3–16.4 LTS
  3. Cluster → Advanced Options → Spark tab — add config:
    neo4j.url neo4j+s://xxxx.databases.neo4j.io
    neo4j.authentication.type basic
    neo4j.authentication.basic.username {{secrets/neo4j/username}}
    neo4j.authentication.basic.password {{secrets/neo4j/password}}
    
  4. Use Single user access mode (Unity Catalog shared mode not supported)

Databricks — Secrets (preferred over plaintext)

# Store credentials once:
# databricks secrets create-scope --scope neo4j
# databricks secrets put --scope neo4j --key url
# databricks secrets put --scope neo4j --key username
# databricks secrets put --scope neo4j --key password

neo4j_url  = dbutils.secrets.get(scope="neo4j", key="url")
neo4j_user = dbutils.secrets.get(scope="neo4j", key="username")
neo4j_pass = dbutils.secrets.get(scope="neo4j", key="password")

spark.conf.set("neo4j.url", neo4j_url)
spark.conf.set("neo4j.authentication.type", "basic")
spark.conf.set("neo4j.authentication.basic.username", neo4j_user)
spark.conf.set("neo4j.authentication.basic.password", neo4j_pass)

Key Configuration Options

OptionDescriptionDefault
neo4j.urlBolt/Neo4j URI— (required)
neo4j.authentication.typenone, basic, kerberos, bearerbasic
neo4j.authentication.basic.usernameUsernamedriver default
neo4j.authentication.basic.passwordPassworddriver default
neo4j.authentication.bearer.tokenBearer token—
neo4j.databaseTarget databasedriver default
neo4j.access.moderead or writeread
neo4j.encryption.enabledTLS (ignored with +s/+ssc URI)false
neo4j.db.transaction.timeoutTransaction timeout (ms)driver default
neo4j.db.transaction.metadata.<key>Custom transaction metadata surfaced in query log [6.0]empty
neo4j.authentication.type = supplier nameCustom AuthenticationTokenSupplierFactory (e.g. keycloak via org.neo4j.connectors:commons-authn-keycloak) for expiring OAuth/OIDC tokens—

Cypher version and query tuning [6.0]

OptionEffect
cypher.versionCypher language version — 5 (default) or 25
cypher.tuning.<param>Emits CYPHER <param>=<value> preamble on every generated query

Valid with labels, relationship, query on reads and writes; rejected with gds.

df = (spark.read.format("org.neo4j.spark.DataSource")
    .option("query", "MATCH (o:Object) RETURN o.id AS id, o.name AS name")
    .option("cypher.version", "25")
    .option("cypher.tuning.runtime", "parallel")           # CYPHER 25 runtime=parallel
    .option("db.transaction.metadata.app", "spark-etl")    # tags transactions in query.log
    .load())

Reading from Neo4j

Three mutually exclusive read modes — use exactly one per .read() call.

Label scan (nodes)

# PySpark
df = (spark.read.format("org.neo4j.spark.DataSource")
    .option("labels", ":Person")
    .load())
df.printSchema()
df.show()
// Scala
val df = spark.read
  .format("org.neo4j.spark.DataSource")
  .option("labels", ":Person")
  .load()

Multi-label filter (AND): .option("labels", ":Person:Employee")

Result includes <id> (internal Neo4j id) and <labels> columns.

Cypher query read

df = (spark.read.format("org.neo4j.spark.DataSource")
    .option("query", "MATCH (p:Person)-[:ACTED_IN]->(m:Movie) RETURN p.name AS actor, m.title AS movie, m.year AS year")
    .load())

Use explicit RETURN aliases — they become DataFrame column names. No SKIP/LIMIT in query (connector handles pagination).

Relationship scan

df = (spark.read.format("org.neo4j.spark.DataSource")
    .option("relationship", "BOUGHT")
    .option("relationship.source.labels", ":Customer")
    .option("relationship.target.labels", ":Product")
    .load())

Result columns: <rel.id>, <rel.type>, <source.*>, <target.*>, plus relationship properties.

Read partition tuning

df = (spark.read.format("org.neo4j.spark.DataSource")
    .option("labels", ":Transaction")
    .option("partitions", "10")        # parallel partitions (default: 1)
    .option("batch.size", "5000")      # rows per partition batch (default: 5000)
    .option("schema.flatten.limit", "100")  # rows sampled for schema inference
    .load())

Full read options reference: references/read-patterns.md


Writing to Neo4j

SaveMode

SaveModeCypherRequires
AppendCREATEnothing extra
OverwriteMERGEnode.keys (nodes) or *.node.keys (rels)
ErrorIfExistsCREATE + error if exists—

Always create uniqueness constraints on node.keys properties before writing in Overwrite mode.

Write nodes — Append (CREATE)

from pyspark.sql import Row

people = spark.createDataFrame([
    {"name": "Alice", "age": 30},
    {"name": "Bob",   "age": 25},
])

(people.write.format("org.neo4j.spark.DataSource")
    .mode("Append")
    .option("labels", ":Person")
    .save())

Write nodes — Overwrite (MERGE)

(people.write.format("org.neo4j.spark.DataSource")
    .mode("Overwrite")
    .option("labels", ":Person")
    .option("node.keys", "name")       # comma-separated; df_col:node_prop if names differ
    .save())

node.keys with rename: .option("node.keys", "df_col:node_property,id:personId")

Write nodes — Scala

import org.apache.spark.sql.SaveMode

peopleDF.write
  .format("org.neo4j.spark.DataSource")
  .mode(SaveMode.Overwrite)
  .option("labels", ":Person")
  .option("node.keys", "name")
  .save()

Write relationships

Use coalesce(1) before relationship writes to avoid deadlocks.

rel_df = spark.createDataFrame([
    {"cust_id": "C1", "prod_id": "P1", "qty": 3},
    {"cust_id": "C2", "prod_id": "P2", "qty": 1},
])

(rel_df.coalesce(1)
    .write.format("org.neo4j.spark.DataSource")
    .mode("Append")
    .option("relationship", "BOUGHT")
    .option("relationship.save.strategy", "keys")
    .option("relationship.source.labels", ":Customer")
    .option("relationship.source.save.mode", "Match")          # require existing nodes
    .option("relationship.source.node.keys", "cust_id:id")
    .option("relationship.target.labels", ":Product")
    .option("relationship.target.save.mode", "Match")
    .option("relationship.target.node.keys", "prod_id:id")
    .option("relationship.properties", "qty:quantity")
    .save())

relationship.source.save.mode / relationship.target.save.mode:

  • Match — find existing nodes (fail if missing)
  • Append — always CREATE new nodes
  • Overwrite — MERGE nodes

Pre-write scripts [6.0]

script.N runs Cypher once before write operations, in numbered order. Required for index/constraint setup when using query mode (schema.optimization.* rejected there).

(df.write.format("org.neo4j.spark.DataSource")
    .mode("Overwrite")
    .option("query", "MERGE (p:Person {email: event.email}) SET p.name = event.name")
    .option("script.1", "CREATE CONSTRAINT person_email IF NOT EXISTS FOR (p:Person) REQUIRE p.email IS UNIQUE")
    .option("script.2", "CREATE INDEX person_name IF NOT EXISTS FOR (p:Person) ON (p.name)")
    .option("index.await.timeout", "300")   # db.awaitIndexes seconds; 0 disables
    .save())

script (single statement) and script.N are mutually exclusive. Semicolon-separated statements inside one script fail on 6.0.

Full write options reference: references/write-patterns.md


Databricks — Delta Lake → Neo4j Pipeline

# Read from Delta table (Unity Catalog or DBFS)
delta_df = spark.read.format("delta").table("catalog.schema.customers")

# Optional: filter/transform in Spark before writing
filtered = delta_df.filter("active = true").select("customer_id", "name", "region")

# Write to Neo4j
(filtered.write.format("org.neo4j.spark.DataSource")
    .mode("Overwrite")
    .option("labels", ":Customer")
    .option("node.keys", "customer_id")
    .option("batch.size", "20000")
    .save())

Pipeline pattern for relationships — load both node sets first, then write edges:

# Step 1: ensure nodes exist
customers_df.write.format("org.neo4j.spark.DataSource").mode("Overwrite") \
    .option("labels", ":Customer").option("node.keys", "customer_id").save()

products_df.write.format("org.neo4j.spark.DataSource").mode("Overwrite") \
    .option("labels", ":Product").option("node.keys", "product_id").save()

# Step 2: write relationships (single partition)
orders_df.coalesce(1).write.format("org.neo4j.spark.DataSource").mode("Append") \
    .option("relationship", "ORDERED") \
    .option("relationship.save.strategy", "keys") \
    .option("relationship.source.labels", ":Customer") \
    .option("relationship.source.save.mode", "Match") \
    .option("relationship.source.node.keys", "customer_id:customer_id") \
    .option("relationship.target.labels", ":Product") \
    .option("relationship.target.save.mode", "Match") \
    .option("relationship.target.node.keys", "product_id:product_id") \
    .save()

Write Performance Tuning

ScenarioRecommendation
Node writes (no lock contention)repartition(N) where N ≤ Neo4j CPU cores
Relationship writes (lock risk)coalesce(1) — single partition
Large datasetsbatch.size 10000–20000 (adjust to heap)
MERGE-heavy loadsAdd uniqueness constraint on node.keys properties first
# Aggressive batch — monitor Neo4j heap; OOM risk above 50k
(big_df.repartition(8)
    .write.format("org.neo4j.spark.DataSource")
    .mode("Overwrite")
    .option("labels", ":Event")
    .option("node.keys", "event_id")
    .option("batch.size", "20000")
    .save())

Common Errors

ErrorCauseFix
ClassNotFoundException: org.neo4j.spark.DataSourceJAR not on classpathAdd spark.jars.packages or attach library
Deadlock on relationship writeMultiple partitions locking nodescoalesce(1) before write
Duplicate nodes on OverwriteNo uniqueness constraint on keysCREATE CONSTRAINT ON (n:Label) ASSERT n.prop IS UNIQUE
OOM on Neo4j sidebatch.size too largeReduce to 5000–10000; check heap
Schema all string columnsNo APOC, schema not sampledSet schema.flatten.limit higher; or use query mode with explicit types
Access mode is read error on writeSession opened in read modeRemove neo4j.access.mode or set to write
Databricks Shared cluster failsUnity Catalog shared mode unsupportedSwitch to Single User access mode
NoSuchMethodError / IncompatibleClassChangeError on Spark 45.x connector on a Spark 4 runtimeUse org.neo4j.connectors:spark:6.0.0-s_2.13
Relationship write ignores rel.* / source.* columns after upgrade6.0 default strategy is keys, not native.option("relationship.save.strategy", "native")
script option rejected with multiple statements6.0 removed ;-separated scriptsSplit into script.1, script.2, …

Checklist

  • Connector coordinate matches Spark line — org.neo4j.connectors:spark:*-s_2.13 for Spark 4.x, org.neo4j:neo4j-connector-apache-spark_<scala>:*_for_spark_3 for Spark 3.x
  • Scala version in artifact matches cluster runtime (2.13 only on 6.x)
  • Credentials in Databricks secrets or env vars — not hardcoded
  • node.keys set when using Overwrite mode
  • Uniqueness constraint created on node.keys properties before MERGE writes
  • coalesce(1) applied before relationship writes
  • batch.size sized to Neo4j heap (start 5000, tune up)
  • Delta Lake → Neo4j: nodes written before relationships
  • query mode: no SKIP/LIMIT in Cypher (connector paginates internally)
  • Databricks: Single User access mode (not Shared)

レビュー

まだレビューはありません。使ってみた感想をお寄せください。

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