Step 5 of the PaperOrchestra pipeline (arXiv:2604.05018). Iteratively refine drafts/paper.tex by simulating peer review and applying targeted revisions, with strict accept/revert halt rules. Maintains a worklog and snapshots each iteration so revert is real, not symbolic. TRIGGER when the orchestrator delegates Step 5 or when the user asks to "refine the draft", "iterate on the paper", or "run peer review on this paper".
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Run the four paper-quality autoraters from PaperOrchestra (arXiv:2604.05018, App. F.3) — Citation F1 (P0/P1 partition + Precision/Recall/F1), Literature Review Quality (6-axis 0-100 with anti-inflation rules), SxS Overall Paper Quality (side-by-side), and SxS Literature Review Quality (side-by-side). TRIGGER when the user asks to "score this paper draft", "evaluate against the benchmark", "compare two papers", or "run the autoraters".
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Pre-pipeline aggregator that scans AI agent cache directories (.claude, .cursor, .antigravity, .openclaw) or any user-specified directory for experimentation logs, extracts insights and numeric results, and formats them as PaperOrchestra-ready inputs (idea.md + experimental_log.md). TRIGGER when the user says "aggregate my agent logs for paper writing", "extract experiments from my coding agent history", "prepare PaperOrchestra inputs from my cache", "turn my agent logs into a paper", mentions a folder or directory they want to use as the basis for a paper, or wants to run PaperOrchestra but only has scattered agent experiment histories rather than structured inputs. Run this BEFORE paper-orchestra. Also called automatically by paper-orchestra when workspace/inputs/idea.md or workspace/inputs/experimental_log.md are missing.
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
scholar 是 paper-search 的别名 / 软链。统一从这里入口可在内部代码中用更短的 命名空间。本子 skill 的实际实现指向 tools/paper_search/。
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Reverse-engineer raw materials (Sparse idea, Dense idea, experimental log) from an existing AI research paper to build a benchmark case for evaluating paper-writing pipelines. Replicates the PaperWritingBench dataset construction procedure from arXiv:2604.05018 §3 / App. C. TRIGGER when the user asks to "build a benchmark case from this paper", "reverse-engineer raw materials", or "evaluate my pipeline against PaperWritingBench".
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
论文检索子 skill。通过 OpenAlex API(默认)、arXiv、Semantic Scholar、CrossRef 四个免费源聚合搜索学术文献,返回结构化论文元信息(含 DOI / 摘要 / 引用数)。 默认零配置;可选 EZMM_OPENALEX_EMAIL / EZMM_S2_API_KEY 提升配额。
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Step 2 of the PaperOrchestra pipeline (arXiv:2604.05018). Execute the visualization plan from outline.json — render plots and conceptual diagrams from experimental_log.md and idea.md, optionally refine via VLM critique loop, and produce context-aware captions. Runs in parallel with the literature-review-agent. TRIGGER when the orchestrator delegates Step 2 or when the user asks to "generate the figures for my paper" or "render the plots from this experiment log".
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
EZMM writer-stage adapter for the vendored PaperOrchestra skill pack. Use by default during pipeline/04-paper-writing for outline-first paper drafting, literature-review planning, section writing, and refinement discipline. The adapter maps EZMM runtime artifacts to PaperOrchestra-style inputs, runs PaperOrchestra-first writing automatically, and returns EZMM-compatible paper.md.
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Orchestrate the full PaperOrchestra (Song et al., 2026, arXiv:2604.05018) five-agent pipeline to turn unstructured research materials (idea, experimental log, LaTeX template, conference guidelines, optional figures) into a submission-ready LaTeX manuscript and compiled PDF. TRIGGER when the user asks to "write a paper from my experiments", "turn this idea and these results into a paper", "generate a conference submission", "run paper-orchestra on X", or otherwise wants the end-to-end paper-writing pipeline. Coordinates the outline-agent, plotting-agent, literature-review-agent, section-writing-agent, and content-refinement-agent skills.
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Step 1 of the PaperOrchestra pipeline (arXiv:2604.05018). Convert (idea.md, experimental_log.md, template.tex, conference_guidelines.md) into a strict JSON outline containing a plotting plan, literature search plan (Intro + Related Work), and section-level writing plan with citation hints. TRIGGER when the orchestrator delegates Step 1 or when the user asks to "outline a paper from raw materials" or "generate the paper structure".
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Step 3 of the PaperOrchestra pipeline (arXiv:2604.05018). Execute the literature search strategy from outline.json — discover candidate papers via web search, verify them through Semantic Scholar (Levenshtein > 70 fuzzy title match, temporal cutoff, dedup by paperId), build a BibTeX file, and draft Introduction + Related Work using ≥90% of the verified pool. Runs in parallel with the plotting-agent. TRIGGER when the orchestrator delegates Step 3 or when the user asks to "find citations for my paper", "draft the related work", or "build the bibliography".
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woodfishhhh/EZ_math_model☆ 432026年7月28日 更新
Redact reverse-engineering findings for public disclosure while preserving methodology, generalizable patterns, and teaching value. Covers the private-vs-public repo split, deny-list pattern maintenance, orphan-commit publish pattern that prevents `git log` leaks, category-based redaction calibration (methodology/pattern/version-finding/internal), and the `check-redaction.sh`-style CI gate that blocks merges when a deny-listed pattern appears. Use when publishing findings about a CLI harness you don't own, when preparing upstream proposals to an unrelated project, or when archiving a private research repo for public reference.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Navigate the Kabbalistic Tree of Life (Etz Chaim) — explore the ten sephirot, twenty-two paths, four worlds, and three pillars. Covers correspondences, contemplative exercises, and structural analysis. Use when exploring a sephira's attributes and divine names, studying structural relationships between sephirot, learning the four worlds (Atzilut through Assiah), tracing a path's Hebrew letter and tarot attributions, or using the Tree as a symbolic map for understanding a concept or system.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Conduct a peer review of research methodology, experimental design, and manuscript quality. Covers methodology evaluation, statistical appropriateness, reproducibility assessment, bias identification, and constructive feedback. Use when reviewing a manuscript, preprint, or internal research report, evaluating a research proposal or study protocol, assessing evidence quality behind a claim, or reviewing a thesis chapter or dissertation section.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Build and analyze discrete or continuous Markov chains including transition matrix construction, state classification, stationary distribution computation, and mean first passage times. Use when modeling a memoryless system with observed transition counts or rates, computing long-run steady-state probabilities, determining expected hitting times or absorption probabilities, classifying states as transient or recurrent, or building a foundation for hidden Markov models or reinforcement learning MDPs.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Guide a person in systematic observation of systems, patterns, or phenomena. AI coaches neutral attention, field notes methodology, pattern recognition, hypothesis formation, and structured reporting for debugging, research, and system understanding. Use when a person wants to understand a system's behavior before intervening, when someone keeps jumping to conclusions and needs the discipline of observation first, when preparing an evidence-based report, or when studying team dynamics or process effectiveness through direct observation.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Handcraft paper from plant fibres — fibre harvesting, pulping, sheet forming with a mould and deckle, pressing, and drying. Covers fibre sources (cotton, kozo, abaca, recycled paper), beating methods, sizing, and decorative techniques. Use when making handmade paper for art, stationery, or bookbinding, when creating unique textured or embedded paper for special projects, or when learning traditional paper making as a craft practice.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Extract the conceptual essence of a repository as skills, agents, and teams — the project's roles, procedures, and coordination patterns expressed as agentskills.io-standard definitions. Reads an arbitrary codebase and produces generalized definitions that capture WHAT the project does and WHO operates it, without replicating HOW it does it. Use when onboarding to a new codebase and wanting to understand its conceptual architecture, when bootstrapping an agentic system from an existing project, when studying a project's organizational DNA for cross-pollination, or when creating a skill/agent/team library inspired by a reference implementation.
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pjt222/agent-almanac☆ 422026年10月23日 更新
AI systematic knowledge acquisition from unfamiliar territory — deliberate model-building with feedback loops. Maps spaced repetition principles to AI reasoning: survey the territory, hypothesize structure, explore with probes, integrate findings, verify understanding, and consolidate for future retrieval. Use when encountering an unfamiliar codebase or domain, when a user asks about a topic requiring genuine investigation rather than recall, when multiple conflicting sources require building a coherent model, or when preparing to teach a topic and deep understanding is required first.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Format citations across academic styles (APA 7, Chicago, Vancouver, IEEE) using CSL processors and R tooling. Convert between citation styles, generate in-text citations and reference lists, and validate formatting against style guides using citeproc, knitcitations, and Quarto's built-in citation engine. Use when rendering a Quarto or R Markdown document with formatted citations, converting a bibliography between citation styles, generating a standalone reference list, or setting up citation infrastructure for a multi-document project.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Guide a person through structured learning of a new topic, technology, or skill. AI acts as learning coach — assessing current knowledge, designing a learning path, walking through material, testing understanding, adapting difficulty, and planning review sessions for retention. Use when a person wants to learn a new technology and does not know where to start, when someone feels overwhelmed by documentation, when a person keeps forgetting material and needs spaced repetition, or when transitioning between domains and needing a gap analysis.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Prepare herbal remedies from Hildegard von Bingen's Physica. Covers plant identification, preparation methods (tinctures, poultices, infusions, decoctions), dosage guidance, contraindications, and safety review based on 12th-century medieval pharmacopeia. Use when needing an herbal remedy for a specific ailment using Hildegardian pharmacopeia, seeking guidance on preparation methods and dosage, researching medieval herbal medicine, or integrating Hildegard's plant wisdom into holistic health practice.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Format a Quarto or R Markdown report following APA 7th edition style. Covers apaquarto/papaja packages, title page, abstracts, citations, tables, figures, and reference formatting. Use when writing an academic paper in APA format, creating a psychology or social science research report, generating reproducible manuscripts with embedded analysis, or preparing a thesis or dissertation chapter.
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pjt222/agent-almanac☆ 422026年10月23日 更新
Identify insects using body plan analysis, dichotomous keys to order, wing venation, mouthpart type, antennae form, leg and tarsal structure, and confidence levels. Covers the fundamental hexapod body plan verification, a simplified dichotomous key to major orders, wing venation and type analysis, mouthpart classification, antennae morphology, leg specialization and tarsal formula, and a structured confidence assessment framework. Use when you need to identify an unknown insect beyond preliminary order placement, are working through a specimen for taxonomic study, want to distinguish between similar orders or families, or need to assign a confidence level to a field identification.
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pjt222/agent-almanac☆ 422026年10月23日 更新