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Run molecular property predictions, explore molecular shapes, and estimate how compounds bind to proteins through a cloud Python API. Process compound batches and connect modeling steps without maintaining local high-performance computing infrastructure.
中文简介正在准备中。当前显示英语简介。
Analyze gene-expression differences in bulk RNA-seq data using PyDESeq2. Validate count tables and experimental designs, test explicit comparisons, adjust for multiple testing, shrink effect estimates, and export statistical results with volcano and MA plots.
中文简介正在准备中。当前显示英语简介。
Build Python workflows for filtering, grouping, joining, and reshaping table data with Polars. Get guidance on migrating pandas code and using lazy evaluation, which optimizes a processing plan before execution, for large datasets.
中文简介正在准备中。当前显示英语简介。
Read, analyze, modify, and visualize molecular structures with RDKit in Python. Calculate molecular properties, search for similar structures or specific structural patterns, apply reaction rules, and generate 2D or 3D coordinates with detailed control over processing.
中文简介正在准备中。当前显示英语简介。
Combine laboratory animal welfare measurements into reference-relative RELSA severity scores. Analyze individual trajectories, explore forecasts for specified observation times, and derive candidate score zones, with explicit checks on normalization, reference selection, prediction intervals, and evaluation limits.
中文简介正在准备中。当前显示英语简介。
Simulate quantum dynamics, steady states, and spectra with QuTiP 5. The skill guides solver selection and checks physical assumptions, units, state validity, and numerical convergence so local simulation results can be reviewed with their limitations.
中文简介正在准备中。当前显示英语简介。
Design and review PCR and RT-qPCR primers, short DNA sequences used to start amplification. Assess predicted structures and unintended products under explicit reaction conditions, with reports that track reference sequences, coordinates, and search limits.
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Create research presentation slides with clear structure, concise text, figures, and timing guidance. The skill supports PowerPoint, LaTeX Beamer, and image-based PDFs, with workflows for preserving original research charts and reviewing slide layouts.
中文简介正在准备中。当前显示英语简介。
Retrieve, validate, and export protocols.io experimental procedures while preserving version and attribution details. Check saved JSON offline, save protocol PDFs, or prepare reviewable plans for updates and publication; bundled scripts do not execute changes.
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Review papers, drafts, and research ideas with evidence-linked feedback focused on improvement. Audit low-stakes assessment rubrics, trace supporting evidence, and check rater agreement and uncertainty without ranking people or recommending consequential decisions.
中文简介正在准备中。当前显示英语简介。
Validate and convert crystal and molecular structures, compare symmetry assignments, and build phase diagrams showing relative stability from local calculation data. Preserve sources and parameters while analyzing materials data or planning limited Materials Project queries.
中文简介正在准备中。当前显示英语简介。
Read, query, filter, and write genomic files with pysam in Python. Extract regions, summarize variants, and count aligned bases while handling coordinate conventions, file indexes, headers, and the reference sequences needed to decode CRAM files.
中文简介正在准备中。当前显示英语简介。
Work with genomic regions in Polars tables to find overlaps, nearby regions, covered bases, and gaps. Read and write bioinformatics files, query data with SQL, and check coordinate conventions when joining datasets or migrating from bioframe.
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Explore gene, drug, disease, and phenotype associations in a downloaded PrimeKG CSV. Retrieve direct relationships, disease summaries, and paths through one intermediate node while preserving relationship types and data provenance for reproducible research and hypothesis generation.
中文简介正在准备中。当前显示英语简介。
Build quantum circuits with Qiskit, test them locally, and prepare them for IBM quantum hardware. The skill covers hardware-specific circuit conversion, sampling, expectation values, and analysis of measurement results, uncertainty, and resource usage.
中文简介正在准备中。当前显示英语简介。
Search the 1000 Genomes Project’s 3,202 participants for genetic variants and their carriers. Filter by frequency or annotations, inspect variants in selected individuals, and check relatedness between two participants.
中文简介正在准备中。当前显示英语简介。
Prepare and launch nf-core/pacsomatic workflows for matched tumor and normal PacBio HiFi samples. Generate sample sheets and launch files from unaligned BAM inputs, run local checks, submit cluster launchers, and troubleshoot startup failures.
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Inspect CPU, memory, disk, and accelerator information alongside container and scheduler limits. Produce a JSON snapshot with identifying details removed and conservative worker and memory estimates for planning local workloads, without running stress tests.
中文简介正在准备中。当前显示英语简介。
Build and operate bioinformatics workflows on Latch using Python, Nextflow, or Snakemake. Configure computing resources and input forms, move data, connect Registry records, and register, debug, launch, and monitor analysis runs.
中文简介正在准备中。当前显示英语简介。
Helps organize biological datasets and models in LaminDB. Covers data registration, table validation, annotation with standardized biological terms, metadata searches, and tracking analysis inputs and outputs so researchers can preserve the context needed to repeat their work.
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Analyze pooled CRISPR screens from FASTQ reads or guide-count tables using MAGeCK. Validate inputs, assess library and replicate quality, and rank enriched or depleted genes with effect sizes and false discovery rates, which estimate false-positive proportions.
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Inspect microscopy data stored on OMERO.server, export selected image metadata, and plan imports or exports. The skill uses explicit data scopes and limits, with dry-run helpers and reviewed targets for workflows that change server data.
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Find and download public cancer imaging data from NCI Imaging Data Commons. Select CT, MR, PET, or pathology datasets using metadata, view images in a browser, and check licenses and citations before using the data.
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Process satellite imagery and map data for geospatial research. Helps align coordinate systems and image grids, calculate vegetation and terrain measures, summarize data by area, and analyze road networks while preserving masks and source information.
中文简介正在准备中。当前显示英语简介。