Guide for creating DAAF agent definition files. Covers 12-section template, hook registration, skills-in-frontmatter, integration checklist. Use when adding or revising agents. For SKILL.md files, use skill-authoring instead.
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High-performance data manipulation with lazy/eager execution, expressions, I/O (CSV, Parquet, JSON), aggregations, joins, string/datetime ops, and pandas interop. Covers performance optimization patterns and common anti-patterns. DAAF's default DataFrame library — all pipeline code uses Polars, not pandas. Use for any DataFrame operation, reading/writing Parquet files, or migrating existing pandas code to Polars. R equivalent: tidyverse (use when execution language is R).
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Polars DataFrame library for high-performance data manipulation in Python. Covers lazy/eager execution, expressions, I/O (CSV, Parquet, JSON, database), aggregations, joins, string/datetime operations, pandas/NumPy interop, and performance optimization. Use when working with Polars DataFrames, migrating from pandas, reading Parquet files, or optimizing data pipeline performance.
Comprehensive skill for high-performance data manipulation with Polars. Use decision trees below to find the right guidance, then load detailed references.
Polars is a fast DataFrame library for Python (and Rust):
This skill targets Polars 1.x (tested with 1.37.1). Key changes from 0.x:
apply renamed to map_elements (0.19+)groupby renamed to group_by (0.19+)melt renamed to unpivot (1.0+)pl.Utf8 is now pl.String (1.0+, Utf8 still works as alias)Each topic in ./references/ contains focused documentation:
| File | Purpose | When to Read |
|---|---|---|
quickstart.md | Installation, concepts, first DataFrame | Starting with Polars |
dataframes-series.md | Creation, selection, filtering, modification | Basic data manipulation |
io-data.md | CSV, Parquet, JSON, database I/O | Loading/saving data |
expressions.md | Expression system, contexts, chaining | Understanding Polars idioms |
aggregations-grouping.md | GroupBy, window functions, statistics | Summarizing data |
joins-concat.md | Joins, concatenation, pivot/unpivot | Combining DataFrames |
strings-datetime-categorical.md | String ops, datetime, categoricals | Type-specific operations |
performance.md | Lazy execution, optimization, anti-patterns | Making code faster |
interop.md | Pandas, NumPy, PyArrow, DuckDB | Working with other tools |
gotchas.md | Common errors, anti-patterns, migration | Debugging issues |
quickstart.md then expressions.mdquickstart.md, expressions.md, then interop.mdperformance.md firstThe reference-file routing in this skill applies to advisory and brainstorming turns as much as implementation. Recommending an approach, reviewing a plan, or answering a question that touches a routed topic calls for reading the routed reference file just as much as writing code does — the reference files carry curated caveats and environment-specific constraints that this overview and general knowledge lack.
Getting started?
├─ Install Polars → ./references/quickstart.md
├─ Create first DataFrame → ./references/quickstart.md
├─ Understand lazy vs eager → ./references/quickstart.md
├─ Learn expression syntax → ./references/expressions.md
└─ Coming from Pandas → ./references/interop.md
Loading/saving data?
├─ Read CSV file → ./references/io-data.md
├─ Read Parquet (recommended) → ./references/io-data.md
├─ Read JSON/NDJSON → ./references/io-data.md
├─ Read from database → ./references/io-data.md
├─ Read multiple files (glob) → ./references/io-data.md
├─ Write to file → ./references/io-data.md
└─ Larger-than-memory data → ./references/performance.md
Filtering/selecting?
├─ Select columns by name → ./references/dataframes-series.md
├─ Select by pattern/regex → ./references/dataframes-series.md
├─ Select by data type → ./references/dataframes-series.md
├─ Filter rows by condition → ./references/dataframes-series.md
├─ Filter with multiple conditions → ./references/dataframes-series.md
├─ Handle null values → ./references/dataframes-series.md
└─ Add/modify columns → ./references/dataframes-series.md
Aggregating data?
├─ Basic statistics (sum, mean, etc.) → ./references/aggregations-grouping.md
├─ Group by columns → ./references/aggregations-grouping.md
├─ Multiple aggregations → ./references/aggregations-grouping.md
├─ Window functions (over) → ./references/aggregations-grouping.md
├─ Rolling/moving averages → ./references/aggregations-grouping.md
├─ Cumulative operations → ./references/aggregations-grouping.md
└─ Ranking within groups → ./references/aggregations-grouping.md
Combining data?
├─ Join two DataFrames → ./references/joins-concat.md
├─ Left/right/outer join → ./references/joins-concat.md
├─ Anti-join (not in) → ./references/joins-concat.md
├─ Concatenate vertically → ./references/joins-concat.md
├─ Pivot (long to wide) → ./references/joins-concat.md
└─ Unpivot/melt (wide to long) → ./references/joins-concat.md
Performance issues?
├─ Use lazy evaluation → ./references/performance.md
├─ Avoid row iteration → ./references/performance.md
├─ Reduce memory usage → ./references/performance.md
├─ Process large files → ./references/performance.md
├─ Optimize query plan → ./references/performance.md
└─ Common anti-patterns → ./references/performance.md
Having issues?
├─ Type errors → ./references/gotchas.md
├─ Null handling → ./references/gotchas.md
├─ Expression context errors → ./references/gotchas.md
├─ String operations → ./references/strings-datetime-categorical.md
├─ Date parsing issues → ./references/strings-datetime-categorical.md
├─ Performance problems → ./references/gotchas.md
├─ Pandas migration issues → ./references/gotchas.md
├─ Memory errors → ./references/gotchas.md
└─ General troubleshooting → ./references/gotchas.md
Important: In data research pipelines (see CLAUDE.md), Polars transformations are executed through script files, not interactively. This ensures auditability and reproducibility.
The pattern:
scripts/stage{N}_{type}/{step}_{task-name}.pyClosely read agent_reference/SCRIPT_EXECUTION_REFERENCE.md for the mandatory file-first execution protocol covering complete code file writing, output capture, and file versioning rules.
See:
agent_reference/SCRIPT_EXECUTION_REFERENCE.md — Script execution protocol and format with validationThe examples below show Polars syntax. In research workflows, wrap them in scripts following the file-first pattern.
import polars as pl
import polars.selectors as cs # For column selection by type
# Eager: immediate execution
df = pl.read_csv("data.csv")
# Lazy: deferred, optimized execution (preferred for large data)
lf = pl.scan_csv("data.csv")
df = lf.collect() # Execute when ready
# Select columns
df.select("a", "b")
df.select(pl.col("a"), pl.col("b"))
df.select(pl.all().exclude("id"))
# Filter rows
df.filter(pl.col("a") > 10)
df.filter((pl.col("a") > 10) & (pl.col("b") == "x"))
# Add/modify columns
df.with_columns(
(pl.col("a") * 2).alias("a_doubled"),
pl.col("b").str.to_uppercase().alias("b_upper")
)
# Conditional column
df.with_columns(
pl.when(pl.col("a") > 10)
.then(pl.lit("high"))
.otherwise(pl.lit("low"))
.alias("category")
)
# Group and aggregate
df.group_by("category").agg(
pl.col("value").sum().alias("total"),
pl.col("value").mean().alias("average"),
pl.len().alias("count")
)
| Function | Purpose |
|---|---|
pl.col("name") | Reference a column |
pl.lit(value) | Literal value |
pl.all() | All columns |
pl.exclude("col") | All except specified |
pl.len() | Row count |
pl.when().then().otherwise() | Conditional logic |
.alias("name") | Rename result |
.cast(pl.Int64) | Convert type |
| Type | Description |
|---|---|
pl.Int64, pl.Int32 | Integers |
pl.Float64, pl.Float32 | Floats |
pl.String (or pl.Utf8) | Strings |
pl.Boolean | True/False |
pl.Date, pl.Datetime | Dates and timestamps |
pl.Duration | Time differences |
pl.Categorical | Categorical strings |
pl.List | List of values |
pl.Struct | Named fields |
# I/O
df = pl.read_csv/parquet/json("file")
lf = pl.scan_csv/parquet/ndjson("file") # Lazy
df.write_csv/parquet/json("file")
# Selection
df.select("a", "b")
df.select(cs.numeric()) # By type
# Filtering
df.filter(pl.col("a") > 1)
# Aggregation
df.group_by("key").agg(pl.col("val").sum())
# Joining
df1.join(df2, on="key", how="left")
# Sorting
df.sort("col", descending=True)
# Lazy execution
lf.collect() # Run query
lf.explain() # Show plan
| Topic | Reference File |
|---|---|
| Installation | ./references/quickstart.md |
| DataFrame Creation | ./references/quickstart.md |
| Lazy vs Eager | ./references/quickstart.md |
| Column Selection | ./references/dataframes-series.md |
| Row Filtering | ./references/dataframes-series.md |
| Adding Columns | ./references/dataframes-series.md |
| CSV Files | ./references/io-data.md |
| Parquet Files | ./references/io-data.md |
| Database Connections | ./references/io-data.md |
| Expressions | ./references/expressions.md |
| Method Chaining | ./references/expressions.md |
| Contexts | ./references/expressions.md |
| GroupBy | ./references/aggregations-grouping.md |
| Window Functions | ./references/aggregations-grouping.md |
| Rolling Windows | ./references/aggregations-grouping.md |
| Joins | ./references/joins-concat.md |
| Concatenation | ./references/joins-concat.md |
| Pivot/Unpivot | ./references/joins-concat.md |
| String Operations | ./references/strings-datetime-categorical.md |
| Datetime Handling | ./references/strings-datetime-categorical.md |
| Categorical Data | ./references/strings-datetime-categorical.md |
| Query Optimization | ./references/performance.md |
| Memory Management | ./references/performance.md |
| Anti-Patterns | ./references/performance.md |
| Pandas Conversion | ./references/interop.md |
| NumPy Integration | ./references/interop.md |
| DuckDB Integration | ./references/interop.md |
| Type Errors | ./references/gotchas.md |
| qcut Label Gotcha | ./references/gotchas.md |
| Null Handling Issues | ./references/gotchas.md |
| Expression Context Errors | ./references/gotchas.md |
| Performance Anti-Patterns | ./references/gotchas.md |
| Migration from Pandas | ./references/gotchas.md |
| Memory Issues | ./references/gotchas.md |
When this library is used as a primary analytical tool, include in the report's Software & Tools references:
Vink, R. et al. Polars: Blazingly fast DataFrames [Computer software]. https://pola.rs/
Cite when: Polars is the core data processing engine for the analysis (typically always true in DAAF pipelines). Do not cite when: Only used for trivial file I/O in a script primarily using another tool.
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Guide for creating DAAF agent definition files. Covers 12-section template, hook registration, skills-in-frontmatter, integration checklist. Use when adding or revising agents. For SKILL.md files, use skill-authoring instead.
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Researcher-facing analytic triangulation ("creative verification") for stress-testing provisional findings and designing pre-specified challenges before an analysis runs. Turns a researcher's concern or focal claim into competing explanations, bounded discriminating tests, audited diagnostic artifacts, and evidence-calibrated interpretations in a hypothesis/evidence ledger — behavioral, output-level verification replacing line-by-line code review. Covers 12 challenge families organized by Shadish-Cook-Campbell validity type, named sensitivity statistics, pre-committed interpretation rules, anti-fishing guardrails, and interactive diagnostic-artifact QA. Use in Ad Hoc Collaboration to verify, challenge, or stress-test a result, or to design discriminating tests before an analysis runs. Not code-change verification (verify skill / code review) and not final adjudication or re-execution (data-verifier, Reproducibility Verification) — prospective, hypothesis-driven challenge design of analytic claims.
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In-situ smoke testing that verifies a LIVE DAAF deployment functions end-to-end in whatever provider route it is configured for. Auto-detects the active install route (anthropic-subscription, openrouter, chatgpt-subscription shim, openai-api shim) and runs tiered probes: Tier 0 free preflight (route/env coherence, hooks, statuslines, shim health); Tier 1 one live round-trip (~cents); Tier 2 a six-probe functional battery (dispatch, coding, web, skill loading, isolation-strip, nested-dispatch deny); Tier D a zero-cost deterministic battery (bats, Pester, lint, safety-hook tests). Use after install, after a rebuild or update, after any provider/config change (new API key, model remap, shim change), for pre-release validation, or when asked "is my install working" or to "smoke test the deployment/config." Requires the DAAF_DEV=1 dev image; a contributor tool, not end-user-facing. NOT DAAFBench (model behavioral-adherence evaluation under benchmarks/) and NOT scripts/smoke_tests/ (R/Python library-package smoke tests).
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Operational framework for the DAAF orchestrator. Defines engagement modes, confirmation protocol, subagent dispatch, context budget, and reference-loading. Loaded exclusively by the orchestrator — not for subagents or user questions.
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Data science methodology and method-selection routing for quantitative research. Covers EDA, data validation, descriptive analysis, causal inference (IV, DiD, RD, synthetic control), clustering/PCA/UMAP, supervised ML, geospatial analysis, network analysis, and visualization design. Contains the canonical method-to-library routing tree, routed by execution language — Python: statsmodels (OLS/GLM/time series), pyfixest (FE/DiD), linearmodels (RE/GMM/SUR), svy (complex surveys), scikit-learn (clustering/prediction ML), geopandas (spatial), igraph (network analysis); R: r-stats (OLS/GLM/time series), fixest (FE/DiD), plm (panel/RE/IV), survey-r (complex surveys), tidymodels (ML), sf-terra (spatial), igraph-r (network analysis). Load the routed tool-specific skill before giving tool-specific advice or writing code — library skills encode environment constraints and curated caveats absent from general knowledge.
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Interpretation guidance for Urban Institute Education Data Portal datasets. The Portal is a curation layer over federal data: lowercase variable names, integer-encoded categoricals, standardized missing codes (-1 missing, -2 not applicable, -3 suppressed). Covers year definitions, grade encoding (grade=-1 is Pre-K, not missing), suppression rates, ODC-By licensing, and cross-source join identifiers. Load before analyzing any Portal data. Routes to source-specific deep-dive skills for individual datasets.
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