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vasp_errors

Diagnose and fix common VASP errors including ZBRENT, BRMIX, EDDDAV, VERY BAD NEWS, POTCAR mismatch, and memory errors.

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Hello-QM/catgo-LRG星标 208(GitHub 208 + cccskills 0)

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  • SKILL.md4.9 KB

SKILL.md(原文)

安装前可以查看交给 AI 代理的指令内容。

VASP Error Troubleshooting Skill

When to Use

Use this skill when a VASP calculation has failed with a recognized error message. These are runtime errors from the VASP executable, distinct from convergence issues (see convergence_issues skill) and CatGo engine errors (see workflow_errors skill).

Diagnostic Steps

Step 1: Get the error message

catgo_workflow_engine(action: "get_result", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>"
})

Or check the step-level error:

catgo_workflow_engine(action: "status", params: { workflow_id: "<wf_id>" })

Step 2: Match the error and apply fix

Error Reference

ZBRENT: Fatal error in bracketing

Cause: VASP cannot find the electronic groundstate within the bracketing interval during volume/cell relaxation (ISIF=3 or ISIF=7).

Fix:

catgo_workflow_engine(action: "modify_params", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>",
  params: {
    "IBRION": 1,
    "EDIFF": 1e-6,
    "NELM": 200,
    "NSW": 200
  }
})

Then retry:

catgo_workflow_engine(action: "retry", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>"
})

Alternative: switch from IBRION=2 (CG) to IBRION=1 (quasi-Newton), or reduce POTIM from 0.5 to 0.1.

BRMIX: Very serious problems

Cause: Charge density mixing fails. Common with slabs, surfaces, and systems with vacuum regions.

Fix:

catgo_workflow_engine(action: "modify_params", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>",
  params: {
    "ALGO": "All",
    "AMIX": 0.1,
    "BMIX": 0.01,
    "AMIX_MAG": 0.2,
    "BMIX_MAG": 0.01
  }
})

For severe cases, also add LREAL = .FALSE. and increase NELM.

EDDDAV: Sub-space rotation failed / warning

Cause: Davidson iterative diagonalization failed. Common for systems with many bands near the Fermi level (metals, small-gap semiconductors).

Fix:

catgo_workflow_engine(action: "modify_params", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>",
  params: {
    "ALGO": "All"
  }
})

ALGO=All uses a combination of Davidson and RMM-DIIS that is more robust. If that still fails, try ALGO=Damped.

VERY BAD NEWS: Internal error in subroutine

Cause: Usually POSCAR has overlapping atoms (two atoms at the same position) or the structure is severely distorted.

Fix:

  1. Check the structure for overlapping atoms:
catgo_view(action: "get_state")
  1. If atoms overlap, fix the structure:
catgo_structure(action: "delete", indices: [<overlapping_index>])
  1. If the structure is distorted from a previous failed relaxation, reload the original structure and restart.

POTCAR mismatch / POTCAR not found

Cause: The pseudopotential file does not match the elements in POSCAR, or the POTCAR path on the HPC is not configured correctly.

Fix:

  1. Check system configuration:
catgo_system(action: "status")
  1. Verify the element order matches. If the user has added/removed elements, the POTCAR needs to be regenerated. The CatGo engine handles this automatically, but manual HPC runs may have stale POTCARs.

  2. Check that VASP_PP_PATH is set on the HPC.

Memory errors (SBROUTINE / segfault / killed by OOM)

Cause: Not enough memory for the calculation. Common with large systems, high ENCUT, or too many k-points.

Fix options:

Reduce memory usage:

catgo_workflow_engine(action: "modify_params", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>",
  params: {
    "NCORE": 4,
    "KPAR": 2,
    "LREAL": ".TRUE.",
    "LWAVE": ".FALSE.",
    "LCHARG": ".FALSE."
  }
})

Or request more resources in the run config (increase nodes/memory).

RSPHER: Internal error

Cause: Augmentation sphere overlap. Atoms are too close together.

Fix: Similar to VERY BAD NEWS -- check for overlapping or very close atoms. Sometimes caused by too-aggressive ionic relaxation. Reduce POTIM:

catgo_workflow_engine(action: "modify_params", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>",
  params: { "POTIM": 0.1 }
})

PRICEL: Internal error / symmetry detection

Cause: VASP symmetry detection fails on distorted or defective structures.

Fix:

catgo_workflow_engine(action: "modify_params", params: {
  workflow_id: "<wf_id>",
  task_id: "<task_id>",
  params: { "SYMPREC": 1e-4, "ISYM": 0 }
})

Setting ISYM=0 disables symmetry entirely (safe but slower).

General Recovery Pattern

For any VASP error: diagnose (get error from task result), modify parameters, retry, then verify. If the same error recurs after two attempts, the structure itself may be problematic. If errors appear on every system, the HPC environment may be misconfigured -- route to workflow_errors.

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