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概要と使いどころ
Scheduled ArXiv paper monitor. Uses CronCreate to search configured keywords every 6 hours, deduplicates via MemoryRecord, and stores summaries in named memory for morning briefing integration.
日本語の概要は準備中です。原文の説明を表示しています。
Mint a new REQ ID in the Assured project's namespace, with module assignment, and append it to the requirements-spec.
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Query the ChEMBL database web services for measured bioactivity data, compound records and calculated properties, targets, assays, mechanisms of action, drug indications and warnings. Use this skill to build curated SAR or QSAR datasets for a target, look compounds up by SMILES, InChIKey, name, or ChEMBL id, run similarity and substructure searches, and check what chemistry is already known against a protein. Also trigger when a query mentions ChEMBL ids (CHEMBL...), pChEMBL values, IC50/Ki/Kd/EC50 retrieval, assay confidence scores, or ebi.ac.uk/chembl.
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Retrieve protein sequences, annotation, and structures from UniProtKB, the RCSB PDB, and AlphaFold DB. Use this skill to resolve a gene or protein name to a UniProt accession, pull sequences and FASTA files, find binding sites and domains, search the PDB by UniProt accession, sequence, ligand, or text, download mmCIF/PDB coordinates and biological assemblies, fetch AlphaFold models with their pLDDT confidence, and check whether a structure is actually usable before docking or simulating it. Also trigger on UniProt accessions, PDB ids, rest.uniprot.org, search.rcsb.org, files.rcsb.org, alphafold.ebi.ac.uk, id mapping, SEQRES, or missing residues.
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Medicinal chemistry filters for compound triage. Apply drug-likeness rules (Lipinski rule of five, Veber, Oprea, CNS, lead-like, rule of three), structural alert catalogs (PAINS a/b/c, NIBR screening-deck severity, Brenk, BMS, Glaxo, Dundee, ChEMBL common alerts), ZINC-15 percentile complexity metrics (Bertz, SAscore, QED, Whitlock, Barone), chemical-group detection, Lilly demerits, and the medchem query language (MATCHRULE, HASALERT, HASPROP, HASGROUP) for filtering a library at scale. Also trigger on medchem, `import medchem as mc`, RuleFilters, NIBRFilters, CommonAlertsFilters, NamedCatalogs, QueryFilter, PAINS filtering, or structural alerts.
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Query the Open Targets Platform GraphQL API for target-disease associations, genetic and clinical evidence, tractability and safety liabilities, target prioritisation metrics, known drugs and mechanisms of action, and disease ontology. Use this skill for target identification and validation, target-disease evidence review, druggability assessment, drug repurposing, and resolving gene, disease, and drug names to Ensembl, MONDO, and ChEMBL identifiers. Also trigger when a query mentions Open Targets, platform.opentargets.org, association scores, tractability buckets, or api.platform.opentargets.org.
日本語の概要は準備中です。原文の説明を表示しています。
Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological relationships across genes and proteins, drugs, diseases, phenotypes, pathways, biological processes, exposures and anatomy. Use this skill to search entities by name, pull direct neighbours and their evidence types, summarise the local network around a disease, and find direct or two-hop drug-disease connections for repurposing hypotheses. Also trigger on PrimeKG, kg.csv, Harvard Dataverse knowledge graph, disease_protein, drug_protein, indication and contraindication edges, or network pharmacology over a biomedical knowledge graph.
日本語の概要は準備中です。原文の説明を表示しています。
Curated text animation catalog with exact JSON specs for headings, labels, counters, and text swaps. Use when an agent needs to pick or translate named effects like soft blur in, typewriter, shared axis, line reveal, stagger, crossfade, or kinetic builds into WAAPI, Motion, Framer Motion, GSAP, CSS, Lottie, Rive, or similar stacks.
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Orchestrate multi-agent Claude Code teams with Minoan-Semitic naming — auto-discover project context (CLAUDE.md, roadmaps, plans, issues) and generate named team configurations with structured task lists and file ownership. Triggers on parallel workstreams, agent teams, multi-agent, spawn agents, swarm, minoan-swarm.
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Research UI component patterns across the component.gallery corpus — 60 canonical component types, ~95 production design systems, 2,600+ examples — plus an AI-era overlay (prompt inputs, tool-call cards, streaming status, citations) and composite patterns (command palette, app shell, agent console). Compare implementations, find alternative component names, ground frontend decisions in real-world precedent. Pairs with minoan-frontend-design for research-then-build workflows. Triggers on component patterns, how do others implement X, design system research, component comparison, AI chat components, agent UI patterns.
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Probe the runtime state of a named feature flag in a CLI binary. Covers the four-pronged evidence protocol (binary strings, live invocation, on-disk state, platform cache), the four-state classification (LIVE / DARK / INDETERMINATE / UNKNOWN), gate-vs-event disambiguation, conjunction-gate handling, and skill-substitution scenarios where a flag appears DARK but the capability is delivered by other means. Use when verifying whether a documented or inferred capability has rolled out, when auditing dark-launched features, or when a prior probe's conclusions need refreshing against a new binary version.
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Redact a network/MITM capture directory — JSONL, JSON, logs, HAR-style dumps — in place before it can be referenced publicly, scrubbing credential tokens, API keys, service ids, UUIDs, emails, home paths, usernames, and device or session hashes while preserving token-class prefixes for analysis and leaving public identifiers untouched. Covers class-preserving substitution, an idempotent re-runnable pass, distinguishing a secret from a public id, and verifying the scrubbed capture through the redaction gate. Use when a wire capture from a sanctioned probe must enter notes, a guide, or a public repo without leaking the session that produced it.
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Navigate the Kabbalistic Tree of Life (Etz Chaim) — explore the ten sephirot, twenty-two paths, four worlds, and three pillars. Covers correspondences, contemplative exercises, and structural analysis. Use when exploring a sephira's attributes and divine names, studying structural relationships between sephirot, learning the four worlds (Atzilut through Assiah), tracing a path's Hebrew letter and tarot attributions, or using the Tree as a symbolic map for understanding a concept or system.
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Classify gate call variants in a minified JavaScript bundle. Covers context-window extraction around a flag occurrence, identification of 4–6 reader variants (sync boolean, sync config-object, bootstrap-aware TTL, truthy-only, async bootstrap, async bridge), default-value extraction (boolean / null / numeric / config-object literal), conjunction detection across `&&` predicates, kill-switch inversion detection, and production of a gate-mechanics record that feeds probe- feature-flag-state. Use when a flag's behavior cannot be inferred from its name alone, when the binary uses multiple reader libraries, or when config-object gates carry structured schemas distinct from boolean gates.
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Coordinate safely with a peer interactive session sharing the same git worktree — check first whether a separate worktree removes the problem, then declare path and branch scope before the first edit, survive a contended index lock, and review the whole branch before opening a PR. Activate when starting work in a repository that may already be occupied, when a git command fails with `index.lock: File exists`, when `guard:snapshot` refuses because a snapshot already exists, or when a commit turns out to contain a file this session never edited. When one session leads and the other supports, divide the labour by shape and re-derive every reported number against a named revision before citing it. Distinct from subagent concurrency: a peer session cannot be bracketed, because no baseline exists from before its edits.
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Scaffold a new R package with complete structure including DESCRIPTION, NAMESPACE, testthat, roxygen2, renv, Git, GitHub Actions CI, and development configuration files (.Rprofile, .Renviron.example, CLAUDE.md). Follows usethis conventions and tidyverse style. Use when starting a new R package from scratch, converting loose R scripts into a structured package, or setting up a package skeleton for collaborative development.
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Author a new agent-almanac workflow — a self-contained `.mjs` orchestration script run by Claude Code's Workflow tool. Covers choosing a workflow over a team, copying the template, the triple-name discovery contract, the pure-literal meta and sidecar frontmatter, building the body with the injected primitives, the advisory/implementing capability contract, the adversarial-verification fail-safes, validation, and manual installation. Use when you have a repeatable, parameterized procedure that coordinates several agents and want it captured as a reusable, auditable artifact whose control flow is fixed in code.
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One to three sentences describing what this skill accomplishes, followed by key activation triggers. This field is the primary mechanism agents use to decide whether to activate the skill — it is read during discovery before the full body is loaded. Start with a verb. Include the most important "when to use" conditions inline. Max 1024 characters.
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Audit and repair Claude Code discovery symlinks for skills, agents, and teams. Compares registries against .claude/ directories at project and global levels, detects missing, broken, and extraneous symlinks, distinguishes almanac content from external projects, and optionally repairs gaps. Use after adding new skills or agents, after a repository rename or move, when slash commands stop working, or as a periodic health check.
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Compute and analyze gematria (Hebrew numerical values) using standard, ordinal, and reduced methods. Covers word-to-number conversion, isopsephy comparisons, and interpretive frameworks. Use when computing the numerical value of a Hebrew word or phrase, comparing two words for shared gematria values, studying a biblical verse or divine name for numerical correspondences, or connecting a numerical result to its position on the Tree of Life.
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Detects seven structural anti-patterns in Claude Projects that cause unpredictable output, ignored instructions, and degraded quality. Diagnoses Monolith, Orphan File, Echo Chamber, Phantom Conversation, Kitchen Sink, Misaligned Hierarchy, and Blurred Layers. Use when user says "what's wrong with my project," "Claude ignores my instructions," "diagnose my project," "why is output inconsistent," "review my project setup." Also trigger on symptom-phrased: "Claude doesn't follow my rules," "my instructions keep getting overridden," "my Project isn't behaving as designed." Use alongside rootnode-project-audit if available for deeper structural analysis. Activate whenever the user describes symptoms of unreliable, inconsistent, or degraded Claude Project output, even if they do not name a specific pattern. Do NOT use when the user's primary request is Memory-layer rebalancing (use rootnode-memory-optimization if available) or scoring a single prompt (use rootnode-prompt-validation if available).
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Guides selection of identity, reasoning, and output approaches for Claude prompts based on task characteristics. Trigger on: "help me choose an approach," "which approach fits this task," "recommend a prompt pattern," "compare reasoning methods," "map this task to the right approach," "what combination of approaches," "which identity fits," "which reasoning method." Also trigger on symptom-phrased: "my prompt feels generic," "I don't know which approach to use," "my output lacks domain depth." Covers decision-tree logic across 8 identity approaches, 18 reasoning variants, and 10 output formats. After selection, use the relevant catalog skill if available to retrieve full templates. Activate whenever approach-selection across multiple categories is the primary decision. Do NOT use when the user already names a specific approach to retrieve (use the relevant catalog skill directly if available) or for evaluating existing prompts (use rootnode-prompt-validation if available).
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Use when searching codebases (text, structural/AST, files by name, PDFs/archives, code stats) or building context before a task.
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Design, build, refactor, or review terminal interfaces—full-screen TUIs, interactive prompts, and command-line tools. Use for terminal-app layout and UX, CLI behavior, ncurses-style tools, dashboards, REPLs, fzf-like pickers, and libraries such as Bubble Tea, Ratatui, Textual, or Ink, including requests that name a known TUI such as lazygit, k9s, btop, helix, or yazi instead of saying “TUI.” Do not use for browser or web UI, native GUI, editor or font configuration, or backend and shell work that has no terminal interface.
日本語の概要は準備中です。原文の説明を表示しています。