「generate」の検索結果

Count reads per gene from aligned BAM files using Subread featureCounts. Use when processing BAM files from STAR/HISAT2 to generate gene-level counts for DESeq2/edgeR.

日本語の概要は準備中です。原文の説明を表示しています。

Calculate read depth and coverage across genomic intervals using bedtools genomecov and coverage. Generate bedGraph files, compute per-base depth, and summarize coverage statistics. Use when assessing sequencing depth, creating coverage tracks, or evaluating target capture efficiency.

日本語の概要は準備中です。原文の説明を表示しています。

Generate consensus FASTA sequences by applying VCF variants to a reference using bcftools consensus. Use when creating sample-specific reference sequences or reconstructing haplotypes.

日本語の概要は準備中です。原文の説明を表示しています。

Generates 3D conformer ensembles using RDKit ETKDGv3 with knowledge-enhanced distance geometry, MMFF94/UFF force-field optimization, CREST + GFN2-xTB semi-empirical refinement, and macrocycle-aware torsion preferences. Provides explicit decision rules for single vs ensemble conformer use, RMSD pruning, energy windows, conformer count, and force-field choice. Use when preparing 3D ligands for docking, generating descriptor input for 3D QSAR, or sampling macrocycle/peptide conformational ensembles.

日本語の概要は準備中です。原文の説明を表示しています。

Process Hi-C read pairs using pairtools. Parse alignments, filter duplicates, classify pairs, and generate contact statistics from Hi-C sequencing data. Use when processing raw Hi-C read pairs.

日本語の概要は準備中です。原文の説明を表示しています。

Amplicon sequence variant (ASV) inference from 16S rRNA or ITS amplicon sequencing using DADA2. Covers quality filtering, error learning, denoising, and chimera removal. Use when processing demultiplexed amplicon FASTQ files to generate an ASV table for downstream analysis.

日本語の概要は準備中です。原文の説明を表示しています。

Create and read bigWig browser tracks for visualizing continuous genomic data. Convert bedGraph to bigWig, extract signal values, and generate coverage tracks using UCSC tools and pyBigWig. Use when preparing coverage tracks for genome browsers or extracting signal at specific regions.

日本語の概要は準備中です。原文の説明を表示しています。

Genome-wide association studies (GWAS) with PLINK. Perform case-control and quantitative trait association testing using logistic/linear regression with covariates, generate Manhattan and QQ plots for result visualization. Use when running GWAS or association tests.

日本語の概要は準備中です。原文の説明を表示しています。

Generates standardized quality control reports by aggregating metrics from FastQC, alignment, and other tools using MultiQC. Use when summarizing QC metrics across samples, creating shareable quality reports, or building automated QC pipelines.

日本語の概要は準備中です。原文の説明を表示しています。

Generate alignment statistics using samtools flagstat, stats, depth, coverage, and mosdepth. Use when assessing alignment quality, calculating coverage, or generating QC reports.

日本語の概要は準備中です。原文の説明を表示しています。

Generate protein backbones using RFdiffusion, a diffusion-based generative model for de novo protein structure generation. Use this skill when: (1) Designing binder scaffolds for a target protein, (2) Generating novel protein backbones from scratch, (3) Scaffolding functional motifs into new proteins, (4) Specifying hotspot residues for interface design, (5) Creating symmetric oligomers. For sequence design after backbone generation, use proteinmpnn. For structure validation, use alphafold or chai. For QC thresholds, use protein-qc.

日本語の概要は準備中です。原文の説明を表示しています。

Generate data-backed content briefs by analyzing Google SERP results, competitor content, keyword intent, and audience questions. Produces writer-ready briefs with target queries, required subtopics, recommended format, word count, and competitive differentiation angles.

日本語の概要は準備中です。原文の説明を表示しています。

Extract full transcripts and captions from YouTube videos for content analysis, summarization, note-taking, and repurposing. Supports multiple languages and auto-generated captions. Ideal for research, content creation, and accessibility workflows.

日本語の概要は準備中です。原文の説明を表示しています。

Generate content ideas backed by real audience demand data from Reddit questions, YouTube search gaps, Twitter discussions, and web search trends. Identifies proven topics, underserved questions, and content formats that outperform in your niche.

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When the user wants to create SEO-driven pages at scale using templates and data. Also use when the user mentions "programmatic SEO," "template pages," "pages at scale," "directory pages," "location pages," "[keyword] + [city] pages," "comparison pages," "integration pages," "building many pages for SEO," "pSEO," "generate 100 pages," "data-driven pages," or "templated landing pages." Use this whenever someone wants to create many similar pages targeting different keywords or locations. For auditing existing SEO issues, use an available SEO audit capability. For content strategy planning, use an available content strategy capability.

日本語の概要は準備中です。原文の説明を表示しています。

Design production-ready music prompts and optionally generate music through SandBase. Use for songs, instrumentals, soundtracks, jingles, loops, or multi-part music; use a speech or sound-effect workflow when music is not the main deliverable.

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Generate high-quality Product Requirements Documents (PRDs) for software systems and AI-powered features. Includes executive summaries, user stories, technical specifications, and risk analysis.

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Generate concise, actionable meeting minutes for internal meetings. Includes metadata, attendees, agenda, decisions, action items (owner + due date), and follow-up steps.

日本語の概要は準備中です。原文の説明を表示しています。

Create code-driven explanatory animations and precise vector graphics with Manim, optionally using SandBase for generated images, narration, music, or transcription. Use for mathematical, scientific, algorithmic, or diagrammatic animation; use a video-generation workflow for photoreal footage.

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Build, extend, and verify playable browser games, optionally using SandBase for generated concept art and game assets. Use for substantial 2D or 3D web-game work; use a general frontend workflow for non-game interactive sites.

日本語の概要は準備中です。原文の説明を表示しています。

Generate free images with Agnes Image 2.1 Flash through the Agnes API, including text-to-image, image-to-image, high-density visual prompts, URL results, and local downloads. Use when the user asks for 免费图片, 免费的图片模型, free image API, Agnes image, Agnes Image 2.1 Flash, free AI image generation, image-to-image via Agnes, or wants a free image model Agent skill.

日本語の概要は準備中です。原文の説明を表示しています。

Internal speech module for /codeck. Reads deck content, asks about style and duration only when missing, generates a verbatim speech transcript with stage directions. Outputs $DECK_DIR/speech.md.

日本語の概要は準備中です。原文の説明を表示しています。

Generate structured lead lists from prospect databases and web directories with Firecrawl browser. Use for finding prospects by role, company type, industry, stage, location, technologies, or other criteria and exporting CRM-ready JSON or CSV.

日本語の概要は準備中です。原文の説明を表示しています。

Use when adding or modifying generator scripts that write files; keeps generated artifacts out of docs/ and aligns script defaults with ownership paths plus CI gate updates.

日本語の概要は準備中です。原文の説明を表示しています。