「fast」の検索結果

Python interface to OpenMS for mass spectrometry data analysis. Use for LC-MS/MS proteomics and metabolomics workflows including file handling (mzML, mzXML, mzTab, FASTA, pepXML, protXML, mzIdentML), signal processing, feature detection, peptide identification, and quantitative analysis. Apply when working with mass spectrometry data, analyzing proteomics experiments, or processing metabolomics datasets.

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Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.

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DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.

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Execute a trivial task inline — no subagents, no planning overhead

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Guide for creating high-quality MCP (Model Context Protocol) servers that enable LLMs to interact with external services through well-designed tools. Use when building MCP servers to integrate external APIs or services, whether in Python (FastMCP) or Node/TypeScript (MCP SDK).

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Create a minimal blank Workflow scaffold with a Scene containing ground and light plus an idle run mode. Use for fast new Workflow scaffolding.

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Use this skill when the user is doing hands-on DOCA Comch work on a host + BlueField pair — bringing up host ↔ DPU PCIe control-plane messaging, picking server (DPU) vs client (host) roles, choosing slow-path send-task / recv-callback vs fast-path producer / consumer, querying max-msg-size or max-clients capabilities, registering connection callbacks, or debugging DOCA_ERROR_* returns from the Comch API. Trigger even when the user does not explicitly mention "DOCA Comch" or "Comm Channel" (renamed in DOCA 2.5) — typical implicit phrasings include "send a control message from host to BlueField over PCIe", "DPU can't see the host representor", "DOCA_ERROR_NOT_PERMITTED on server_create", "DOCA_ERROR_AGAIN on task_send submit", "connect callback never fires", or "stream bulk data from a host driver to a DPU agent". Refuse and route elsewhere for installing DOCA itself, BFB / firmware bring-up, non-Comch DOCA libraries, or deploying Comch apps at scale — those belong to other skills.

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Use this skill when the user is invoking doca_flow_dpa_perf on DPA-capable hardware (ConnectX-7 minimum supported, ConnectX-8 recommended, or BlueField-3) to measure rule update / disable rates on the DPA-offloaded DOCA Flow path — picking the active / passive device split, choosing workload-shape axes (burst, queue, completion threshold, workers, hash pipe algo, PSL tables), or reading Kops/sec iteration stats and the optional self-test. Trigger even when the user does not explicitly mention "doca_flow_dpa_perf" or "DPA Provider" — typical implicit phrasings include "how fast can the DPA program path-selector entries", "baseline rule-update rate on ConnectX-8", "tool reports zero ops on my BlueField", "self-test sentinel never shows on tcpdump", or "is my BlueField-2 DPA-capable". Refuse and route elsewhere for the host / DPU-CPU Flow path (doca-flow-perf), Flow pipeline tuning (doca-flow-tune), writing doca-flow / doca-dpa applications, or DOCA install — those belong to other skills.

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Use this skill when the user is measuring GPU-kernel-initiated RDMA WRITE latency through doca-gpunetio — building and running the `gpunetio_ib_write_lat` client + server pair under `doca/tools/gpunetio_ib_write_lat/`, checking GPU-NIC pairing, reading the half-iter / full-iter / CUDA-side usec columns, characterizing median / p99 / jitter for a real-time control loop, picking GPUNetIO vs GPI vs CPU-initiated `perftest`, or weighing the latency-vs-batching trade-off. Trigger even without 'GPUNetIO' or 'ib_write_lat': 'GPU kernel RDMA latency benchmark', 'how fast can a CUDA kernel post a WRITE', 'p99 RDMA latency on H100 + ConnectX', 'kernel-launched WR tail latency', or 'compare GPU-init vs CPU-init perftest'. Route elsewhere for bandwidth runs (doca-gpunetio-ib-write-bw), the GPI surface (doca-gpi), library debugging (doca-gpunetio), or DOCA install.

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Use this skill when building, deploying, evaluating, debugging, or measuring latency for the DeepStream SOP Inference Microservice — a GPU-accelerated FastAPI service that detects whether operators perform assembly-line steps in order via event boundary detection (GEBD) plus VLM classification. Trigger even if the user does not name it: verify operator step sequence, detect missing or out-of-order SOP steps, score factory/work-cell video for procedure compliance, run VLM-based SOP checking on industrial cameras, or call /v1/chat/completions with a file, RTSP, or Basler camera. Also trigger for its internals: SOPVideoProcessor, DeepStream GEBD model (e.g. DDM) via Triton CAPI, nvds_custom_postprocess, Cosmos Reason 1/2 vLLM, SSE streaming, Kafka NvProto/JSON output, Basler/Pylon camera + emulation, Docker compose, chunk-level latency. Do NOT trigger for generic DeepStream pipelines, object detection/tracking, NIM imports, or video summarization.

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Run ProteinMPNN inverse folding via NVIDIA NIM to design protein sequences for a target backbone. Sends user-provided PDB files and design parameters to NVIDIA's hosted API, authenticated with an environment API key, or to a user-selected local NIM. Use for sequence design, backbone redesign, fixed chains and residues, omit_AAs, sampling temperature, soluble model, local Docker, and multi-FASTA output.

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Turn the current conversation or finding into a structured permanent wiki note. Use for save/capture/preserve requests; QUICK MODE writes a fast _raw/ note. Supports named-vault routing such as @research save this. This captures current discussion, not external source ingestion.

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Search and synthesize answers from the compiled Obsidian wiki, including cited and multi-hop answers. Use for questions about existing wiki knowledge or fast index-only lookups. Supports named-vault routing such as wiki-query @work; not for ingesting new sources.

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Queries the UniBind database for experimentally validated transcription factor (TF) binding sites. Use when retrieving direct TF-DNA interaction datasets, downloading binding site coordinates (BED/FASTA) for local analysis, or listing available datasets by species, cell line, or TF name. Don't use to query specific intervals, locations, genes, motif models or expression data.

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Fast-forward through OpenSpec artifact creation. Use when the user wants to quickly create all artifacts needed for implementation without stepping through each one individually.

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Two-dimensional minimalist style with vibrant colors, clean typography, and no 3D effects for fast, user-friendly interfaces.

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Expert in launching small, focused SaaS products fast - the indie hacker approach to building profitable software. Covers idea validation, MVP development, pricing, launch strategies, and growing to sustainable revenue. Ship in weeks, not months. Use when: micro saas, indie hacker, small saas, side project, saas mvp.

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Security-focused code review checklist and automated scanning patterns. Use when reviewing pull requests for security issues, auditing authentication/authorization code, checking for OWASP Top 10 vulnerabilities, or validating input sanitization. Covers SQL injection prevention, XSS protection, CSRF tokens, authentication flow review, secrets detection, dependency vulnerability scanning, and secure coding patterns for Python (FastAPI) and React. Does NOT cover deployment security (use docker-best-practices) or incident handling (use incident-response).

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Intelligently deploys Azure OpenAI models to optimal regions by analyzing capacity across all available regions. Automatically checks current region first and shows alternatives if needed. USE FOR: quick deployment, optimal region, best region, automatic region selection, fast setup, multi-region capacity check, high availability deployment, deploy to best location. DO NOT USE FOR: custom SKU selection (use customize), specific version selection (use customize), custom capacity configuration (use customize), PTU deployments (use customize).

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Build Azure Cosmos DB NoSQL services with Python/FastAPI following production-grade patterns. Use when implementing database client setup with dual auth (DefaultAzureCredential + emulator), service layer classes with CRUD operations, partition key strategies, parameterized queries, or TDD patterns for Cosmos. Triggers on phrases like "Cosmos DB", "NoSQL database", "document store", "add persistence", "database service layer", or "Python Cosmos SDK".

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Generate AI-powered podcast-style audio narratives using Azure OpenAI's GPT Realtime Mini model via WebSocket. Use when building text-to-speech features, audio narrative generation, podcast creation from content, or integrating with Azure OpenAI Realtime API for real audio output. Covers full-stack implementation from React frontend to Python FastAPI backend with WebSocket streaming.

日本語の概要は準備中です。原文の説明を表示しています。

Guide for creating high-quality MCP (Model Context Protocol) servers that enable LLMs to interact with external services through well-designed tools. Use when building MCP servers to integrate external APIs or services, whether in Python (FastMCP), Node/TypeScript (MCP SDK), or C#/.NET (Microsoft MCP SDK).

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Filter reads by quality scores, length, and N content using Trimmomatic and fastp. Apply sliding window trimming, remove low-quality bases from read ends, and discard reads below thresholds. Use when reads have poor quality tails or require minimum quality for downstream analysis.

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Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample swap contamination. Use when suspecting cross-contamination or working with samples prone to microbial contamination.

日本語の概要は準備中です。原文の説明を表示しています。