「provenance」の検索結果

Generate publication-ready methods sections, figure legends, supplementary tables, and data availability statements from ENCODE analysis provenance. Implements the scientific documentation standards requiring complete metadata reporting. Use when the user needs to write methods, generate figure legends, create supplementary tables, draft data availability statements, compile tool citations, or auto-generate any publication text from their ENCODE analysis. Trigger on: methods section, figure legend, supplementary table, data availability, tool citations, publication writing, manuscript, write methods, methods draft, write up, write-up, paper writing, reproducible methods.

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Plan and execute integrative analysis combining multiple ENCODE experiments for cross-dataset or multi-omic workflows. Use when the user wants to combine experiments, perform cross-dataset comparison, multi-omic integration, peak overlap analysis, differential binding, signal correlation, chromatin state segmentation, enhancer-gene linkage, or any analysis that requires merging or comparing data from two or more ENCODE experiments. Covers same-assay cross-sample, multi-omic same-sample, cross-organism, and perturbation integration designs. Guides compatibility checks, batch effect detection, normalization, integration strategy selection, and provenance documentation.

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Convert genomic coordinates between assembly versions (GRCh37/hg19 to GRCh38/hg38, mm9 to mm10). Guides UCSC liftOver for BED files, CrossMap for VCF/bigWig, and handles unmapped regions with provenance logging.

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Use when a task needs the judgment of an Electrical and Electronic Engineering Technologist/Technician — bench-testing a prototype board against a power or timing spec, isolating a resistive fault in a power path with node-to-node voltage-drop measurements, checking whether an oscilloscope's own bandwidth is limiting a rise-time measurement before trusting it, running a power-supply load-regulation sweep, or evaluating ESD-event provenance and IPC-A-610 acceptance on a returned unit.

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Use when a task needs the judgment of a museum or gallery curator — evaluating whether to accept a donated collection or object, writing an acquisition or deaccession recommendation, resolving a provenance or repatriation question, deciding a loan request, or drafting exhibition label copy.

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Ingest supplied source material into an Obsidian vault with provenance and claim tracking: pasted text, files staged in the selected vault's inbox or .raw archive, or explicitly approved URLs. Use for a single source or bounded batch, not for saving an assistant answer. Triggers: ingest, ingest this file, ingest this URL, process this source, read and file this source, batch ingest, ingest these sources.

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Use this skill when designing, generating an MVP blueprint for, auditing, troubleshooting, refactoring, or explaining an agentic harness for any domain. Covers provider-neutral agent architecture for OpenAI, Anthropic, and OpenAI-compatible APIs: agent loops, tool design, record provenance, interactive presentation, user-memory lifecycles, environment-adaptive tools, speculative tool execution, late-bound capabilities, permissions, system prompts, planning, goals, always-on agents and durable runtime, adaptive agent teams, context compaction, memory, skills, MCP/external connectors, public-board communications, hardware agents and board deployment, self-refining recursive harnesses, programmable context, continual refinement, observability, evals, prompt caching, agent-legible environments, feedback loops, and safety.

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Summarizes Google Cloud Data Lineage graphs to help users debug data quality issues and understand data provenance for BQ/GCS. Use when summarizing upstream and downstream data flows, and presenting complex lineage data as an intuitive Markdown report. Don't use for generic BigQuery queries, editing lineage relationships, or downstream deprecation. Don't use for downstream blast-radius impact analysis (use datalineage-bigquery-asset-impact-analysis skill instead).

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Cold-start brownfield reconnaissance — reconstruct the WHOLE game design from an existing codebase when there is no GDD yet. Optionally accepts a free-text game description, notes, or reference links to guide and enrich the scan. Use when the user wants to build the game design from the code, e.g. "create a GDD from this codebase", "reconstruct the design from our code — it's a roguelike deck-builder", "build a design doc from the existing project, here are some refs". Scans the project (engine auto-detected), extracts a system roster + dependency graph and content-type schemas / resources / entities into one passive .unikit/gamedesign/RECON.md, tags every fact provenance:extracted-from-code, and writes a mandatory Intent Gap for what code cannot know (pillars, fantasy, the "why"). Writes nothing else and calls no skill. STRICTLY whole-project cold-start — if a GDD already exists and the user wants a specific part investigated, use /unikit-gd-explore (code lens); to author the GDD use /unikit-gd-spec.

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Manages the Morphir knowledge base under kb/ — OKF bundles and concept documents. Use when adding content to a bundle, creating a new bundle, checking the knowledge base for conformance or provenance drift, building or querying its SQLite index, managing intent through its lifecycle, recording or reading architectural decisions as Decision Records, or navigating, searching and listing its bundles, concepts and links.

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Generates structured U.S. art law summaries with Bluebook citations, doctrinal analysis, and stakeholder guidance. Use when researching art law precedents, advising on art transactions, preparing for art market litigation, or surveying a doctrine or statute across ownership, provenance, copyright, VARA, NAGPRA, authentication, NFTs, or AI-generated art.

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Render a wiki into ONE self-contained, offline HTML snapshot (pages + provenance) for sharing or reviewing wiki knowledge. NOT for capturing knowledge (mk:wiki) or generic diagrams (mk:preview).

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Render a wiki into ONE self-contained HTML snapshot (pages + provenance) that opens offline — no CDN, no remote assets, page content HTML-escaped. Use to share or review accumulated wiki knowledge as a static page. NOT for capturing/approving knowledge (see mk:wiki); NOT for generic code/diagram visuals (see mk:preview).

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Capture, gate, query, and render long-term project knowledge through the gated `mewkit wiki` subsystem. Use to create a wiki, propose/approve candidates (scanner-gated), hand off a skill's terminal artifact as a scanned candidate, recall context, search the FTS index, or list pages. Agents may only PROPOSE candidates; canonical pages are written only via human approve. NOT for short-lived JSON memory (see mk:memory); NOT for fetching external sources (see mk:wiki-research); NOT for HTML snapshots (see mk:wiki-render).

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Maintain a review-first Markdown knowledge base for Codex practices with source provenance, engineering capture, citation-aware queries, explicit archive and promotion, and deterministic linting. Use when asked to capture a durable engineering lesson, ingest Codex research, query or archive what the repository knows, check wiki health, reconcile conflicting guidance, or promote verified knowledge.

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Write commit messages under the agent-commits convention - a Conventional Commits fork with no chore catch-all, intent-only type tokens, facts in trailers, and legally-grounded AI provenance (Assisted-by, never Co-authored-by). Use when composing a commit in a repo whose commitlint.config.js extends agent-commits, when deciding between feat/fix/refactor/perf, or when recording AI participation.

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Archive merged feature specs into project memory with provenance, sweep discovery, and gated cleanup

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Regenerate docs/THIRD-PARTY-NOTICES.md from provenance/borrows.jsonl after any ledger change — even a single new entry — never hand-edit the notices file

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Use when establishing what observability a project actually has — the four Golden Signals, required signal to detected implementation to evidence, and SLI/SLO provenance.

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Paste a URL/snippet before you borrow it — detects its license, runs the derived compatibility policy, and drafts a provenance ledger entry — even before any code is written, not after

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Use to consolidate multiple already-run judge verdicts into one report — consensus, conflicts, must-fix/should-fix with per-judge provenance. Consume-only, no opaque score, never auto-gates.

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Requires durable citations when authoring or researching Agent Skills—maintain references/sources.md per skill, link external research, and record provenance in PRs. Use when creating skills, updating SKILL.md, doing web research for skills, or auditing missing sources.

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Emit a blocking question the owner can read in ~10 seconds and answer in one reply — the scannable, recommendation-first handoff every agent posts when it hits a fork it can't own. Leads with the one decision + a recommendation, carries the 🤖 provenance header, doubles as the

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Create a language-agnostic ghost package (spec + portable tests) from an existing repo by extracting SPEC.md, exhaustive tests.yaml (operations and/or scenarios), INSTALL.md, README.md, VERIFY.md, and upstream LICENSE files with provenance and regeneration instructions. Use when prompts say "/tw-ghost", "ghostify this repo", "spec-ify/spec-package this library", "ghost library", or ask to extract portable spec/tests for libraries or tool-using agent loops (scenario testing); do not use for implementation work or editing skills.

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