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概要と使いどころ
Seamlessly interfaces the Basic Local Alignment Search Tool (BLAST) to search genetic sequence data bases. This work was partially supported by grant no. R21HG005912 from the National Human Genome Research Institute.
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Dirichlet-multinomial mixture models can be used to describe variability in microbial metagenomic data. This package is an interface to code originally made available by Holmes, Harris, and Quince, 2012, PLoS ONE 7(2): 1-15, as discussed fu
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The package enables a simple unified interface to several annotation packages each of which has its own schema by taking advantage of the fact that each of these packages implements a select methods.
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This R package supports interactive visualization of multi-channel images and segmentation masks generated by imaging mass cytometry and other highly multiplexed imaging techniques using shiny. The cytoviewer interface is divided into image-level (Composite and Channels) and cell-level visualization (Masks). It allows users to overlay individual images with segmentation masks, integrates well with SingleCellExperiment and SpatialExperiment objects for metadata visualization and supports image do
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KEGGGraph is an interface between KEGG pathway and graph object as well as a collection of tools to analyze, dissect and visualize these graphs. It parses the regularly updated KGML (KEGG XML) files into graph models maintaining all essenti
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This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Biclustering). MoSBi provides standardized interfaces for biclustering results and can combine their results with a multi-algorithm ensemble approach to compute robust ensemble biclusters on molecular omics data. This is done by computing similarity networks of biclusters and filtering for overlaps using a custom error model. After that, the louvain modularity it used to extract biclus
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This package supports functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation. It provides a univeral interface for gene functional annotation from a variety of sources
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Provides a high-level R interface to CoreArray Genomic Data Structure (GDS) data files. GDS is portable across platforms with hierarchical structure to store multiple scalable array-oriented data sets with metadata information. It is suited
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The FDA Adverse Event Reporting System (FAERS) is a database used for the spontaneous reporting of adverse events and medication errors related to human drugs and therapeutic biological products. faers pacakge serves as the interface between the FAERS database and R. Furthermore, faers pacakge offers a standardized approach for performing pharmacovigilance analysis.
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R generic interface to Hi-C contact matrices in `.(m)cool`, `.hic` or HiC-Pro derived formats, as well as other Hi-C processed file formats. Contact matrices can be partially parsed using a random access method, allowing a memory-efficient representation of Hi-C data in R. The `HiCExperiment` class stores the Hi-C contacts parsed from local contact matrix files. `HiCExperiment` instances can be further investigated in R using the `HiContacts` analysis package.
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Test the boundary between two systems by the contract, not the implementation. Use for APIs, integrations, and shared interfaces.
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SOLID principles checklist with Java examples. Use when a class has too many responsibilities, an abstraction leaks, or a dependency points the wrong way, and when the user asks about Single Responsibility, Open/Closed, Liskov, Interface Segregation or Dependency Inversion. For naming, duplication and method length, use clean-code instead.
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Design, change, or review an HTTP/JSON API surface — endpoints, request/response shapes, authentication and authorization, pagination, idempotency, rate limits, versioning, and deprecations. Use when adding or modifying an HTTP endpoint, reviewing an OpenAPI spec or HTTP route diff, or deciding whether an HTTP API change breaks consumers. Do not use as a protocol-compatibility checklist for gRPC/protobuf, GraphQL, WebSockets, or other non-HTTP/JSON interfaces.
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OpenOCD 下载与调试工具，用于探针探测、固件烧录、Flash 擦除、GDB Server 启动、目标复位控制、 Telnet 在线调试（halt/resume/step/寄存器/内存/断点）、GDB 源码级调试，以及 Semihosting/ITM 输出捕获和底层查询。 当用户提到 OpenOCD、ST-Link、CMSIS-DAP、DAPLink、FTDI、烧录固件、擦除 Flash、GDB Server、 reset、interface/target/board 配置、openocd.cfg、在线调试、单步、断点、寄存器查看、 内存读写、semihosting 时自动触发，也兼容 /openocd 显式调用。 即使用户只是说"烧录一下"、"启动 GDB Server"、"擦除芯片"、"看看寄存器"、"单步调试" 或"抓一下 semihosting"，只要上下文涉及 OpenOCD 支持的开源调试器就应触发此 skill。
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Настройка командного интерфейса подсистемы 1С. Используй когда нужно скрыть или показать команды, разместить в группах, настроить порядок
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Валидация командного интерфейса 1С. Используй после настройки командного интерфейса подсистемы для проверки корректности
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Create HTML dashboards with KPI metric cards, bar/pie/line charts, progress indicators, and data visualizations. Use when users request dashboards, metrics displays, KPI visualizations, data charts, or monitoring interfaces.
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Capture and visually inspect Qt GUI widgets using screenshots. Use when asked to verify GUI rendering, test widget appearance, check layouts, or visually inspect any PySide6/Qt component. Enables Claude to "see" Qt interfaces by capturing offscreen screenshots and analyzing them with vision.
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Web UI design patterns for product owners. Load when designing web application interfaces, writing web-specific acceptance criteria, or evaluating responsive designs.
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Core UX principles for product owners. Load when evaluating interface designs, writing acceptance criteria with UX requirements, or reviewing wireframes and mockups.
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Emotional design and delight patterns for product owners. Load when designing onboarding flows, empty states, first-run experiences, or evaluating the emotional quality of an interface.
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Collect auditable public X/Twitter posts by controlling the user's already logged-in Chrome, searching X's rendered web interface, scrolling visible results, and extracting original post text and metadata from DOM into normalized JSONL. Use for VOC research, social listening, multilingual keyword discovery, competitor monitoring, or historical search when X requires the user's browser session and cookies, credentials, internal GraphQL, paid APIs, or search-engine snippets must not be exported or used. X data layer of the bggg VOC suite (shared project folder; orchestrated by industry-orchestrator, reported by bggg-voc-report).
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Review UI code for Web Interface Guidelines compliance. Use when asked to "review my UI", "check accessibility", "audit design", "review UX", or "check my site against best practices".
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Create distinctive, production-grade frontend interfaces with high design quality. Use this skill when the user asks to build web components, pages, artifacts, posters, or applications (examples include websites, landing pages, dashboards, React components, HTML/CSS layouts, or when styling/beautifying any web UI). Generates creative, polished code and UI design that avoids generic AI aesthetics.
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