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React component structure, hooks rules, file naming, project layout, composition patterns, performance idioms, and effects discipline. Apply when implementing or modifying React SPA code. Use this skill to: - Structure a new component or feature folder. - Apply hooks correctly (rules, naming, dependency arrays). - Compose components via children, render props, or compound patterns. - Write effects only when needed (and avoid common misuses). - Pick performance escape hatches (memo, useMemo, useCallback) when justified. Do NOT use this skill for: - State management lib choice (see react-state-management). - Routing primitives (see react-routing). - Form patterns (see react-forms). - Testing (see react-testing).

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Django web framework conventions: app layout, settings split (base/local/production), URLconf with app namespacing, CBV and DRF ViewSets, DRF serializers and permissions, form validation, signals, Django admin registration, and middleware. Activated automatically by django-plugin/stack.md. Works alongside python-foundation:python-conventions and django-plugin:django-orm-patterns. Use this skill to: - Structure a Django project with multiple apps and correct URLconf hierarchy. - Write CBVs and DRF ViewSets with appropriate permissions and serializers. - Configure settings correctly for different environments. - Use signals for decoupled event handling between apps. - Register models in Django admin with useful list_display and search_fields. Do NOT use this skill for: - Django ORM model field finalization and migration patterns — see django-plugin:django-orm-patterns. - Python language idioms (type hints, dataclasses, enums) — see python-foundation:python-conventions. - Testing patterns — see python-foundation:pytest-testing.

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Provision and manage cloud infrastructure using Terraform with HCL modules, remote state backends, workspaces, and plan/apply workflow. Implement infrastructure as code patterns with variable management, output values, and state locking for team collaboration. Use when provisioning new cloud infrastructure, migrating from ClickOps or CloudFormation to declarative IaC, managing multi-environment infrastructure, versioning infrastructure changes alongside application code, or enforcing standards through reusable modules.

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Format a Quarto or R Markdown report following APA 7th edition style. Covers apaquarto/papaja packages, title page, abstracts, citations, tables, figures, and reference formatting. Use when writing an academic paper in APA format, creating a psychology or social science research report, generating reproducible manuscripts with embedded analysis, or preparing a thesis or dissertation chapter.

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Perform controlled dismantling of rigid system structures while preserving essential capabilities (imaginal discs). Covers rigidity mapping, dissolution sequencing, knowledge extraction, interface archaeology, and safe decomposition of technical debt and organizational calcification. Use when assess-form classified the system as PREPARE or CRITICAL, when a system is so calcified that incremental change is impossible, when technical debt blocks all forward progress, or before adapt-architecture when the current form must be softened before it can be reshaped.

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Remove dead code, unused imports, fix lint warnings, and normalize formatting across a codebase without changing business logic or architecture. Use when lint warnings have piled up during rapid development, unused imports and variables clutter files, dead code paths were never removed, formatting is inconsistent, or static analysis tools report fixable hygiene issues.

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AI internal coordination using stigmergic signals — managing information freshness in context and memory, decay rates for assumption staleness, and emergent coherent behavior from simple local protocols. Use during complex tasks where multiple sub-tasks must coordinate, when context has grown long and information freshness is uncertain, after context compression when information may have been lost, or when sub-task outputs need to feed into each other cleanly without degradation.

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Four-stage alchemical code transmutation — nigredo (decomposition), albedo (purification), citrinitas (illumination), rubedo (synthesis) — with meditate and heal checkpoints between stages. Transforms tangled or legacy code into optimized, well-structured output through systematic material analysis. Use when transforming legacy code into modern equivalents, refactoring deeply tangled modules where incremental fixes keep failing, converting a codebase between paradigms, or when simpler refactoring approaches have stalled and a full-cycle transformation is needed.

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React Native and Expo best practices for building performant mobile apps. Use when building React Native components, optimizing list performance, implementing animations, or working with native modules. Triggers on tasks involving React Native, Expo, mobile performance, or native platform APIs.

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Transform academic papers into in-depth technical articles with multiple writing style options. Use the MinerU Cloud API for high-precision PDF parsing, automatically extracting images, tables, and formulas. Optional formula explanations and GitHub code analysis, generating Markdown and HTML formats.

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Fix silent failures when parsing Grafema semantic IDs that are in URI format instead of legacy arrow format. Use when: (1) code splits semantic IDs by "->" but gets the whole string back because IDs are grafema:// URIs, (2) file path extraction from semantic IDs returns empty or wrong values, (3) derived edges (DEPENDS_ON, etc.) produce 0 results despite source edges existing, (4) any code that processes semantic IDs after the analysis pipeline's to_uri_format() has run. The grafema:// URI format uses # fragments with percent-encoded characters instead of -> separators.

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React Native and Expo best practices for building performant mobile apps. Use when building React Native components, optimizing list performance, implementing animations, or working with native modules. Triggers on tasks involving React Native, Expo, mobile performance, or native platform APIs.

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Build native UI with the @expo/ui package: real SwiftUI on iOS and Jetpack Compose on Android rendered from React in an Expo or React Native app. Covers universal cross-platform components (Host, Column, Row, Button, Text, List, and more imported from @expo/ui), drop-in replacements for popular React Native community libraries (BottomSheet, DateTimePicker, Slider, Menu, etc.), and platform-specific SwiftUI (@expo/ui/swift-ui, iOS only) and Jetpack Compose (@expo/ui/jetpack-compose, Android only) trees and modifiers. Use when adding or reviewing @expo/ui Host/RNHostView trees, building native-feeling UI where standard React Native components fall short (grouped settings forms with toggles, sections, menus, sheets, pickers, sliders), choosing between universal and platform-specific components, or replacing an RN community UI library with a native @expo/ui equivalent. Not for custom native modules, Expo Router navigation, Reanimated, or data fetching.

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Take one piece of long-form content and atomize it into 10-20 platform-specific posts across 8 platforms (Twitter/X, LinkedIn, Instagram, Reddit, TikTok, YouTube, Threads, Bluesky). Turns blog posts, podcasts, videos, and newsletters into native social content for each platform. Use this skill whenever someone has existing content they want to distribute — even if they don't say 'atomize' explicitly. Triggers include: 'repurpose this', 'turn this into posts', 'social content from my blog', 'I wrote an article and want to promote it', 'cross-post this', 'content distribution', 'break this down for social', 'I have a podcast episode', 'turn this video into clips', 'make social posts from this', 'content calendar from this article', or any request to get more mileage from existing content.

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Use the free first-party `dotnet format` CLI for .NET formatting and analyzer fixes. Use when a .NET repo needs formatting commands, `--verify-no-changes` CI checks, or `.editorconfig`-driven code style enforcement.

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Fill in a PDF form, annotate or redact a PDF, or add, remove or rotate its pages, when the office_edit tool is not available. Fills fillable and flat forms with the scripts FORMS.md walks through, puts notes and text on a page, blacks out words so they are gone from the file, and inserts, deletes and rotates pages with pypdf, qpdf or pdftk. Merging, splitting, creating, watermarking and encrypting PDFs are the pdf skill's.

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Use this skill when read_file is not enough to read a PDF — it failed, timed out, or returned garbled or empty text, or the question is about figures, charts, layout, embedded images, attachments, or form-field values. Covers content inventory, text extraction, page rasterization for visual inspection, embedded image/attachment/table/form-field extraction, and choosing the right reading strategy for different document types (text-heavy, scanned, slide-decks, forms, data-heavy). Do NOT use this skill for PDF creation, merging, splitting, watermarking, or encryption — use the pdf skill instead — nor to fill, annotate, redact or rotate: office_edit where the chat has it, else the pdf-forms skill.

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Use this skill any time a spreadsheet file is the primary input or output. This means any task where the user wants to: open, read, edit, or fix an existing .xlsx, .xlsm, .csv, or .tsv file (e.g., adding columns, computing formulas, formatting, charting, cleaning messy data); create a new spreadsheet from scratch or from other data sources; or convert between tabular file formats. Trigger especially when the user references a spreadsheet file by name or path — even casually (like "the xlsx in my downloads") — and wants something done to it or produced from it. Also trigger for cleaning or restructuring messy tabular data files (malformed rows, misplaced headers, junk data) into proper spreadsheets. The deliverable must be a spreadsheet file. Do NOT trigger when the primary deliverable is a Word document, HTML report, standalone Python script, database pipeline, or Google Sheets API integration, even if tabular data is involved.

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When the office_edit tool is available and the spreadsheet is a .xlsx in the workspace, use the office skill instead: the user watches the edit live. Use this skill any time a spreadsheet file is the primary input or output. This means any task where the user wants to: open, read, edit, or fix an existing .xlsx, .xlsm, .xltx, .csv, or .tsv file (e.g., adding columns, computing formulas, formatting, charting, cleaning messy data); create a new spreadsheet from scratch or from other data sources; or convert between tabular file formats. Trigger especially when the user references a spreadsheet file by name or path — even casually (like "the xlsx in my downloads") — and wants something done to it or produced from it. Also trigger for cleaning or restructuring messy tabular data files (malformed rows, misplaced headers, junk data) into proper spreadsheets. The deliverable must be a spreadsheet file. Do NOT trigger when the primary deliverable is a Word document, HTML report, standalone Python script, database pipeline, or Google Sheets API integration, even if tabular data is involved.

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IOC export formats and procedures. CSV, STIX 2.1, OpenIOC, MISP. Handles format conversion and packaging, and carries per-claim evidence grades (access level and claim support) from /quality-of-information-check into each format (STIX confidence, MISP attribute tags).

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Write Prisma Next queries for Postgres, SQLite, or Mongo — pick a lane (Postgres/SQLite `db.orm.<Model>` + `db.sql.<table>`; Mongo `db.orm.<root>` + `db.query.from(...)` pipeline builder), filter / project / sort / paginate, eager-load with `.include(...)`, Postgres/SQLite `db.transaction(...)`, Postgres/SQLite ORM `.aggregate(...)`, Mongo aggregations via query builder, namespace-aware accessors (`db.orm.<ns>.<Model>`, `db.sql.<ns>.<table>`). Triggers: query, where, match, select, project, orderBy, take, skip, include, lookup, first, all, count, aggregate, group, create, update, delete, upsert, returning, transaction, db.close, script teardown, variant, polymorphism, drizzle-style, kysely-style. Notes: `.all()` is a Thenable (just `await` it), iterators are single-use (`RUNTIME.ITERATOR_CONSUMED`), Postgres `count` is `number` while sum/avg/min/max are `number | null`, ranges use chained `.where()` or `and(...)` (no `.between(...)`).

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Use this agent when you need to perform custom bioinformatics analyses on genes or proteins that go beyond standard database lookups. This includes situations where existing domain/family annotations from UniProt are insufficient, when you need to verify dubious annotations, or when you need to perform comparative analyses across gene sets. The agent creates reproducible analysis pipelines with proper dependency management and documentation.

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Use this skill any time a spreadsheet file is the primary input or output. This means any task where the user wants to: open, read, edit, or fix an existing .xlsx, .xlsm, .csv, or .tsv file (e.g., adding columns, computing formulas, formatting, charting, cleaning messy data); create a new spreadsheet from scratch or from other data sources; or convert between tabular file formats. Trigger especially when the user references a spreadsheet file by name or path — even casually (like "the xlsx in my downloads") — and wants something done to it or produced from it. Also trigger for cleaning or restructuring messy tabular data files (malformed rows, misplaced headers, junk data) into proper spreadsheets. The deliverable must be a spreadsheet file. Do NOT trigger when the primary deliverable is a Word document, HTML report, standalone Python script, database pipeline, or Google Sheets API integration, even if tabular data is involved.

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Replace sentence-by-sentence revised or paraphrased text back into an original paper or document while preserving the original formatting, typography, paragraph settings, citation layout, and document conventions as the source of truth. Use when the user provides revised text that maps back to original sentences, paragraphs, sections, or the whole document, but may also contain clear local sentence merges or splits, and asks to replace it back into the source, keep the original formatting, do sentence-by-sentence replacement, preserve original formatting, or only swap wording without rewriting the document. Only allow minimal edits to the rewritten text when fixing citation formatting, restoring protected original content, restoring the original person reference, or minimally splitting/merging text back into original sentence slots; otherwise do not improve grammar, style, logic, or wording.

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