Statistical and computational method to analyze the co-expression of gene pairs at single cell level. It provides the foundation for single-cell gene interactome analysis. The basic idea is studying the zero UMI counts' distribution instead of focusing on positive counts; this is done with a generalized contingency tables framework. COTAN can effectively assess the correlated or anti-correlated expression of gene pairs. It provides a numerical index related to the correlation and an approximate
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bioMate-AI/biomate-bioconductor-kb☆ 7972026年6月21日 更新
Seamlessly interfaces the Basic Local Alignment Search Tool (BLAST) to search genetic sequence data bases. This work was partially supported by grant no. R21HG005912 from the National Human Genome Research Institute.
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bioMate-AI/biomate-bioconductor-kb☆ 7972026年6月21日 更新
This is an R package for interfacing with the BIOM format. This package includes basic tools for reading biom-format files, accessing and subsetting data tables from a biom object (which is more complex than a single table), as well as limi
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bioMate-AI/biomate-bioconductor-kb☆ 7972026年6月21日 更新
Provides S4 data structures and basic functions to deal with flow cytometry data.
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bioMate-AI/biomate-bioconductor-kb☆ 7972026年6月21日 更新
Some basic functions for filtering genes.
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bioMate-AI/biomate-bioconductor-kb☆ 7972026年6月21日 更新
Automatic code quality and best practices analysis. Use proactively when files are modified, saved, or committed. Analyzes code style, patterns, potential bugs, and security basics. Triggers on file changes, git diff, code edits, quality mentions.
日本語の概要は準備中です。原文の説明を表示しています。
alirezarezvani/claude-code-tresor☆ 7802026年7月3日 更新
Expert knowledge for Chaos Studio development including troubleshooting, best practices, decision making, limits & quotas, security, configuration, integrations & coding patterns, and deployment. Use when automating Chaos Studio via CLI/ARM, configuring faults/targets, securing networks/identity, or choosing Workspaces vs classic, and other Chaos Studio related development tasks. Not for Azure Resiliency (use azure-resiliency), Azure Reliability (use azure-reliability), Azure Monitor (use azure-monitor), Azure Site Recovery (use azure-site-recovery).
日本語の概要は準備中です。原文の説明を表示しています。
MicrosoftDocs/Agent-Skills☆ 7792026年10月11日 更新
Build crafted, highly detailed, interactive isometric SVG figures that explain a technical idea as a real physical object (a test rig, a dial gauge, a cabinet of drawers, a plotter, a lock), with many small precise solid parts, four-tone shading, correct painter's order, a framed card with title, hint and live readout, and calm eased motion. Use this whenever someone wants an isometric illustration, an explanatory diagram or figure for docs, a blog post, a landing page or an article, a "Linear-style" or "premium" technical drawing, an interactive explainer, or an SVG that shows how a system, algorithm or component works, even if they never say "isometric". Works framework-free (TypeScript/JS that writes SVG and HTML) and in React/Next.js, and can add realistic WebGL shaders (fire, exhaust, water, caustics, lamp light) that live inside the drawing in the same isometric perspective.
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aeonfun/aeon☆ 7742026年10月14日 更新
Provides guidance for writing, optimizing, and benchmarking C++ CPU kernels with SIMD intrinsics (AVX2/AVX512) for the Hugging Face kernels ecosystem. Includes a two-phase workflow: Phase 1 correctness (generic → AVX2) and Phase 2 performance exploration (AVX512 with branching trial loop), runtime CPU dispatch, OpenMP threading, and brgemm integration for GEMM-heavy kernels.
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huggingface/kernels☆ 7722026年10月14日 更新
Run a basic E2E behavioral probe — one primary scenario smoke test for the grooming step.
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wp-media/wp-rocket☆ 7672026年10月14日 更新
Advanced full SEO audit skill. Runs its own full workflow from local scripts, including the basic SEO checks plus PageSpeed, social metadata, and advanced review modules when available.
日本語の概要は準備中です。原文の説明を表示しています。
JeffLi1993/seo-audit-skill☆ 7662026年6月18日 更新
Cialdini's seven principles of compliance (the classic six — reciprocation, commitment-consistency, social proof, liking, authority, scarcity — plus Unity, added 2016) and Pre-Suasion. Use when crafting ethical persuasion (marketing, sales, negotiation), defending against manipulation, or designing systems that need cooperation. Includes replication-crisis caveats and known factual corrections (Bickman parking-meter numbers, Hofling modern replication, Drive Carefully condition disambiguation, Genovese myth).
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getagentseal/founder-playbook☆ 7512026年10月7日 更新
End-to-end motion-design / animated-ad creation flow on Higgsfield via the MCP connector. Use when the user wants to create motion design, animate a logo, make a video from an image, build an animated ad or brand promo, turn a product into motion, or says 'make a motion', 'motion design', 'animate this', 'make a video from my logo', 'animated brand', 'motion graphics', 'brand motion', 'kinetic graphics', 'promo video', or 'ad video'. Drives a storyboard-first pipeline: brief → storyboard sheet (GPT Image 2) → video (Seedance 2.0) — an AI-generated pixel video clip. Distinct from higgsfield-motion (the named camera/motion preset library) and from higgsfield-vibe-motion (deterministic Remotion code with crisp text); use vibe-motion instead when the text/logo must stay perfectly crisp, editable, and deployable as code.
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OSideMedia/higgsfield-ai-prompt-skill☆ 7432026年9月27日 更新
Use when the user wants a 3D model, mesh or GLB out of Higgsfield — image-to-3D, multi-view-to-3D, text-to-3D, rigging or animating a mesh, remesh / retopology, retexture, or 3D Body (human shape + pose from one photo) — or mentions 3D Jutsu / Scene Builder 3D (private Blender scene projects built through Python). Also use for a 3D turnaround of a character or prop as a consistent multi-angle reference, or a physical 3D blockout rendered as a staging reference for a video shot. Names that trigger it: generate_3d, sam_3_3d, image_to_3d, multi_image_to_3d, meshy_v7_image_to_3d, tripo_h3_1_image_to_3d, tripo_h3_1_multiview_to_3d, hunyuan3d_v3_image_to_3d, meshy_v6_text_to_3d, hunyuan3d_v3_1_text_to_3d, tripo_3d, 3d_rigging, meshy_v5_remesh, meshy_v5_retexture, sam_3_3d_body, animation_actions, scene_builder_3d_*.
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OSideMedia/higgsfield-ai-prompt-skill☆ 7432026年9月27日 更新
Make a clean 45–90 second product demo video for any software product, rendered from code to MP4 with music. Airy light canvas, short centred lines the camera pushes into, the product's own UI rebuilt and shown up close as it is used (typing, results, tables, clicks), integrations, and a logo close. Use when someone wants a product demo, launch video, feature walkthrough or "how it works" video for an app, SaaS or tool.
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Barty-Bart/motion-graphics☆ 6822026年10月13日 更新
Make a 12–20 second high-energy motion-graphics promo for any product, rendered from code to MP4 with synthesised music. Fast beat-locked scene changes, kinetic typography, a shape that carries across every transition, a HUD frame. Use when someone wants a hype reel, teaser, launch sting or showreel-style promo for a product, app or brand.
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Barty-Bart/motion-graphics☆ 6822026年10月13日 更新
Find the papers that answer a research query in Firecrawl's research paper index — a corpus of paper abstracts whose largest share is biomedical and life-science literature (PubMed, bioRxiv, medRxiv), alongside arXiv preprints in CS, physics, and math — using semantic search, semantic and structural expansion, and in-body verification. Use this skill for literature-finding and paper-retrieval tasks of any kind, including clinical, biomedical, drug, gene, disease, and other life-science questions, whether the answer is a single paper or a full multi-paper set. The index is reached only through the `firecrawl_research_*` MCP tools or the `firecrawl research` CLI subcommands. Calling `firecrawl_search` with its `categories` option set to `["research"]` is a different feature — it filters ordinary web search to research-affiliated websites (the list includes PubMed, bioRxiv, medRxiv, arXiv, and publisher sites) and returns page results from them, without querying the paper records in this index.
日本語の概要は準備中です。原文の説明を表示しています。
firecrawl/cli☆ 6512026年10月14日 更新
Turn a complete beginner's app idea into a buildable plan, then keep them oriented while they build. Use it whenever someone who has never coded wants to build or "vibe code" an app, has an idea but no idea where to start, or wants it turned into a plan, MVP scope, tech stack, user flows, or blueprint. It has three on-ramps: the full journey, a validate-only pass ("is my idea worth building", "reality-check this idea"), and a plan-only path for someone arriving with validation done ("I already validated my idea", "I have the research, just plan my MVP", "skip the research"). ALSO use it when a non-coder needs build-time basics: what Git and GitHub are, making an account, "commit and push," local vs. staging vs. production, putting an app online (deploy/ship), or keeping API keys safe. AND use it in Checkup Mode when someone who built with AI says it became a mess, the AI keeps breaking things or going in circles, they're scared to touch their code, or they ask "is my code organized" or "can you clean it up." Built for people who don't know what an API, database, or GitHub is, so reach for it when they never say "plan" or "architecture." Not for an experienced dev debugging, refactoring, or setting up CI/CD.
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TexasBedouin/vibe-check☆ 6162026年7月18日 更新
Use for authorized RF/SDR security research including signal identification, replay feasibility study in shielded labs, and wireless protocol analysis outside classic Wi-Fi.
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coco-research/coco☆ 6142026年10月14日 更新
Provides reverse engineering techniques. Use when the main job is to understand how a compiled, obfuscated, packed, or virtualized target works before exploiting or solving it, including binaries, APKs, WASM, firmware, custom VMs, bytecode, malware-like loaders, and anti-debug or anti-analysis logic. Do not use it when the vulnerability is already understood and the remaining task is exploitation; use pwn instead. Do not use it for pure web workflows, log or disk forensics, or standalone crypto problems unless reversing the implementation is the real blocker.
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coco-research/coco☆ 6142026年10月14日 更新
Agent Media OS, the single skill for every media need in a HyperFrames project. Resolve BGM, SFX, image, icon, brand logo, voice, color grade, or LUT into a frozen local file or paste-ready block + ledger record (one verb, `resolve`); generate via TTS / music / image models when the catalog misses; produce voiceover, transcription, captions, and background removal through one shared audio engine; operate on media (cut / reframe / transform); and reuse assets across projects. Also use for vague feedback that real footage looks dark, flat, boring, should feel retro/camcorder/print/ASCII, needs privacy, or needs a media reveal.
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coco-research/coco☆ 6142026年10月14日 更新
Mandatory entry point: read this first for any request to make, create, edit, animate, or render a video, animation, or motion graphic, including a promo, explainer, captioned clip, title card, overlay, slideshow or interactive deck, Remotion port, or any HyperFrames HTML composition. Also use it to inspect, diagnose, validate, preview, publish, or batch-render an existing HyperFrames project. Inputs may be a website URL, GitHub PR, Figma design or URL, text or brief, existing footage, or music. It resumes project state, captures intent when applicable, selects and installs the owning workflow, and routes domain capabilities. HyperFrames is the default output framework unless the user explicitly chooses another framework for the deliverable or asks only to record a browser session.
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coco-research/coco☆ 6142026年10月14日 更新
Use when an editor or videographer needs production direction — beat-by-beat storyboard, footage to shoot, b-roll, text overlays, music and pacing, transitions, CTA end frame, and per-channel export specs. This is the EDIT instruction, not the spoken script. Trigger on 'video brief', 'editor brief', 'storyboard', 'brief for the video editor', 'how should this video be cut', 'we have the footage and no direction'. Also use when raw clips exist and nobody knows what the final should look like. Not for — the words said on camera, see `04-script-video-global`; briefing a creator to film their own, see `06-ugc-egc-brief-global`; resizing a finished video, see `50-asset-resize-global`.
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minhnv0807/ai-business-skills☆ 6142026年9月12日 更新
Cyber threat intelligence and OSINT analysis toolkit. Runs structured investigations and delivers analyst-grade intelligence products with sourced, trust-scored findings. Use for OSINT and CTI cases, digital-footprint and exposure review, domain/subdomain/DNS/certificate recon, web-infrastructure pivoting (favicon hashes, tracker IDs, TLS certs, phishing-kit fingerprinting, campaign clustering), username/email/phone enumeration, breach and infostealer-log triage, image forensics, geolocation, crypto-wallet and IBAN/bank-account tracing, darknet search, M365/Azure and SaaS tenant recon, China/Sinophone recon (ICP filings, PRC corporate registries, Baidu/FOFA/Quake/ZoomEye), vulnerability and ransomware lookup, threat modeling, PII redaction, and structured reporting. Commands include /case, /sweep, /query, /webpivot, /username, /phone, /email-deep, /breach-deep, /icp, /cn-corp, /iban, /stealer-log, /exposure, /threat-model, /report, /brief, /redact, /apikeys.
日本語の概要は準備中です。原文の説明を表示しています。
7onez/cti-expert☆ 6112026年9月22日 更新